Factsheet for TraesCS3A01G372000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, secretory
MultiLoc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3B01G594200.1
TraesCS3D01G532000.1
TraesCS4A01G057800.1
TraesCS4A01G058100.1
TraesCS4B01G246800.1
TraesCS4B01G247000.1
TraesCS4D01G246100.2
TraesCS4D01G246400.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G44460.1	TraesCS3B01G594200.1	AT1G13740.1	18484180
AT3G44460.1	TraesCS3D01G532000.1	AT1G13740.1	18484180
AT3G44460.1	TraesCS4A01G057800.1	AT1G13740.1	18484180
AT3G44460.1	TraesCS4A01G058100.1	AT1G13740.1	18484180
AT3G44460.1	TraesCS4B01G246800.1	AT1G13740.1	18484180
AT3G44460.1	TraesCS4B01G247000.1	AT1G13740.1	18484180
AT3G44460.1	TraesCS4D01G246100.2	AT1G13740.1	18484180
AT3G44460.1	TraesCS4D01G246400.1	AT1G13740.1	18484180
AT3G44460.1	TraesCS3B01G594200.1	AT1G69260.1	18484180
AT3G44460.1	TraesCS3D01G532000.1	AT1G69260.1	18484180
AT3G44460.1	TraesCS4A01G057800.1	AT1G69260.1	18484180
AT3G44460.1	TraesCS4A01G058100.1	AT1G69260.1	18484180
AT3G44460.1	TraesCS4B01G246800.1	AT1G69260.1	18484180
AT3G44460.1	TraesCS4B01G247000.1	AT1G69260.1	18484180
AT3G44460.1	TraesCS4D01G246100.2	AT1G69260.1	18484180
AT3G44460.1	TraesCS4D01G246400.1	AT1G69260.1	18484180
AT3G44460.1	TraesCS3B01G594200.1	AT3G02140.1	18484180
AT3G44460.1	TraesCS3D01G532000.1	AT3G02140.1	18484180
AT3G44460.1	TraesCS4A01G057800.1	AT3G02140.1	18484180
AT3G44460.1	TraesCS4A01G058100.1	AT3G02140.1	18484180
AT3G44460.1	TraesCS4B01G246800.1	AT3G02140.1	18484180
AT3G44460.1	TraesCS4B01G247000.1	AT3G02140.1	18484180
AT3G44460.1	TraesCS4D01G246100.2	AT3G02140.1	18484180
AT3G44460.1	TraesCS4D01G246400.1	AT3G02140.1	18484180
AT3G44460.1	TraesCS3B01G594200.1	AT3G29575.1	18484180
AT3G44460.1	TraesCS3D01G532000.1	AT3G29575.1	18484180
AT3G44460.1	TraesCS4A01G057800.1	AT3G29575.1	18484180
AT3G44460.1	TraesCS4A01G058100.1	AT3G29575.1	18484180
AT3G44460.1	TraesCS4B01G246800.1	AT3G29575.1	18484180
AT3G44460.1	TraesCS4B01G247000.1	AT3G29575.1	18484180
AT3G44460.1	TraesCS4D01G246100.2	AT3G29575.1	18484180
AT3G44460.1	TraesCS4D01G246400.1	AT3G29575.1	18484180

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G372200.1	Wheat	nucleus	89.82	90.05
TraesCS3A01G372100.2	Wheat	nucleus	90.86	89.0
TraesCS3A01G371900.3	Wheat	nucleus	88.51	88.74
TraesCS3A01G371800.1	Wheat	nucleus	81.46	79.8
TraesCS3D01G365000.1	Wheat	nucleus	80.94	78.28
TraesCS3B01G404300.1	Wheat	nucleus	79.63	78.01
TraesCS3B01G404500.1	Wheat	nucleus	78.33	76.73
TraesCS3B01G404400.1	Wheat	nucleus	78.33	76.73
HORVU3Hr1G084360.2	Barley	nucleus	72.85	65.96
Os01t0859300-01	Rice	nucleus	51.44	60.99
KXG33733	Sorghum	nucleus	57.18	53.28
Zm00001d012296_P001	Maize	nucleus	54.83	50.97
Zm00001d042779_P001	Maize	nucleus	47.52	47.52
KRG96191	Soybean	nucleus	34.2	33.85
CDX75056	Canola	nucleus	35.25	33.83
CDX84141	Canola	nucleus	34.46	33.5
VIT_06s0080g00340.t01	Wine grape	nucleus	28.2	33.33
KRH22688	Soybean	nucleus	28.98	33.04
Bra017251.1-P	Field mustard	nucleus	33.68	32.58
GSMUA_Achr8P07740_001	Banana	nucleus	29.5	32.56
CDY43738	Canola	nucleus	33.94	32.18
Bra005287.1-P	Field mustard	nucleus	36.03	31.51
AT3G44460.1	Thale cress	nucleus	27.15	31.42
GSMUA_Achr3P22710_001	Banana	nucleus	28.72	31.34
TraesCS7A01G170600.1	Wheat	nucleus	27.94	31.2
TraesCS4A01G128900.1	Wheat	nucleus	18.28	31.11
VIT_08s0007g03420.t01	Wine grape	nucleus	32.38	31.0
AT2G36270.3	Thale cress	nucleus	35.77	30.86
TraesCS1A01G306300.1	Wheat	nucleus	25.85	30.56
TraesCS1A01G273000.1	Wheat	nucleus	20.1	30.43
Bra019436.1-P	Field mustard	nucleus	26.63	30.36
CDY10500	Canola	nucleus	27.42	30.35
TraesCS3A01G337200.1	Wheat	nucleus	26.63	30.18
PGSC0003DMT400006851	Potato	nucleus	33.68	30.14
Solyc09g009490.2.1	Tomato	nucleus	33.42	30.05
CDY08701	Canola	nucleus	26.89	29.77
KRH32737	Soybean	nucleus	34.73	29.75
TraesCS6A01G333600.2	Wheat	nucleus	26.89	29.43
TraesCS5A01G237200.2	Wheat	nucleus	28.2	29.35
TraesCS2A01G099400.1	Wheat	nucleus	20.63	28.83
KRH37750	Soybean	nucleus	15.4	27.96
TraesCS3A01G378700.1	Wheat	nucleus	18.54	27.63
KRH20056	Soybean	nucleus	35.51	27.53
TraesCS5A01G141500.1	Wheat	nucleus	21.93	26.84
KRH26633	Soybean	mitochondrion	27.94	16.61

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827
PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF187	SMART:SM00338
SUPFAM:SSF57959	EnsemblPlantsGene:TraesCS3A01G372000	EnsemblPlants:TraesCS3A01G372000.1	InterPro:bZIP	TIGR:cd14707	SEG:seg

Description

No Description!

Coordinates

chr3A:+:622718728..622720242

Molecular Weight (calculated)

41442.6 Da

IEP (calculated)

6.519

GRAVY (calculated)

-0.523

Length

383 amino acids

Sequence
(BLAST)

001: MESDMSKDVN FSEEEVTSHP RVLECEEQMV ASARQSSIFA PTLDEMQYSM CVAGHNFGSM NMDEFMSNIW NAKEFQEATG GVLVGMEVAS VVGAHGGRGG
101: KDAGGSNLAR QESFSLPPPL CRKMVEEVWA EINRETRPVH SQPQSARPSP LIPVEPPAGN GGGVAANEQR GTLGEMTLEQ FLVKVGVVRG SGTGGQAPGP
201: VGMVHGQMNP TPANGMFQVM GDGMVFIPNG YVGMVVVPPP PPPQGGVGIV SLGSSDGRST MTEVDMMNYM GDRTMMENSG ARKRGAPEDQ SCEGSIERRH
301: HRMIKNRESA AQSRGRKQAY TKELEAELNH LKEENSRLKA KEKTILLTKK QILVEKMMEQ SKENVNAKKG GALSRRCSSC IWG

Best Arabidopsis Sequence Match ( AT2G36270.1 )
(BLAST)

001: MVTRETKLTS EREVESSMAQ ARHNGGGGGE NHPFTSLGRQ SSIYSLTLDE FQHALCENGK NFGSMNMDEF LVSIWNAEEN NNNQQQAAAA AGSHSVPANH
101: NGFNNNNNNG GEGGVGVFSG GSRGNEDANN KRGIANESSL PRQGSLTLPA PLCRKTVDEV WSEIHRGGGS GNGGDSNGRS SSSNGQNNAQ NGGETAARQP
201: TFGEMTLEDF LVKAGVVREH PTNPKPNPNP NQNQNPSSVI PAAAQQQLYG VFQGTGDPSF PGQAMGVGDP SGYAKRTGGG GYQQAPPVQA GVCYGGGVGF
301: GAGGQQMGMV GPLSPVSSDG LGHGQVDNIG GQYGVDMGGL RGRKRVVDGP VEKVVERRQR RMIKNRESAA RSRARKQAYT VELEAELNQL KEENAQLKHA
401: LAELERKRKQ QYFESLKSRA QPKLPKSNGR LRTLMRNPSC PL

Arabidopsis Description

ABI5Basic-leucine zipper (bZIP) transcription factor family protein [Source:TAIR;Acc:AT2G36270]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.