Factsheet for TraesCS3A01G337200.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 3
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G330300.1	Wheat	nucleus	95.56	95.85
TraesCS3B01G368300.1	Wheat	nucleus	94.97	93.59
HORVU3Hr1G079640.5	Barley	nucleus	88.17	88.43
VIT_04s0069g01150.t01	Wine grape	nucleus	13.02	77.19
EES03785	Sorghum	nucleus	73.37	74.47
Zm00001d043117_P002	Maize	nucleus	70.12	71.17
TraesCS1A01G306300.1	Wheat	nucleus	62.43	65.12
GSMUA_AchrUn_...	Banana	nucleus	52.07	64.23
GSMUA_Achr11P...	Banana	nucleus	46.15	64.2
Os01t0813100-00	Rice	nucleus	65.09	63.58
Zm00001d012538_P001	Maize	nucleus	49.11	59.29
VIT_13s0175g00120.t01	Wine grape	nucleus	52.96	55.08
KRH44714	Soybean	nucleus	50.0	52.32
KRH13203	Soybean	nucleus	46.75	52.32
KRH56272	Soybean	nucleus	48.22	51.58
TraesCS4A01G128900.1	Wheat	nucleus	34.32	51.56
KRH62689	Soybean	nucleus	47.93	51.27
TraesCS2A01G099400.1	Wheat	nucleus	40.83	50.37
TraesCS5A01G141500.1	Wheat	nucleus	44.38	47.92
VIT_12s0034g00110.t01	Wine grape	nucleus	13.91	47.47
TraesCS3A01G378700.1	Wheat	nucleus	24.26	31.91
TraesCS7A01G170600.1	Wheat	nucleus	31.95	31.49
TraesCS5A01G237200.2	Wheat	nucleus	33.14	30.43
TraesCS1A01G273000.1	Wheat	nucleus	22.49	30.04
TraesCS6A01G333600.2	Wheat	nucleus	30.47	29.43
TraesCS3A01G371800.1	Wheat	nucleus	32.54	28.13
TraesCS3A01G371900.3	Wheat	nucleus	31.07	27.49
Solyc01g009510.1.1	Tomato	nucleus	15.38	27.37
TraesCS3A01G372000.1	Wheat	nucleus	30.18	26.63
TraesCS3A01G372200.1	Wheat	nucleus	29.88	26.44
TraesCS3A01G372100.2	Wheat	nucleus	29.29	25.32

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827
PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF263	SMART:SM00338
SUPFAM:SSF57959	EnsemblPlantsGene:TraesCS3A01G337200	EnsemblPlants:TraesCS3A01G337200.1	InterPro:bZIP	TIGR:cd14707	SEG:seg

Description

No Description!

Coordinates

chr3A:-:584015883..584019163

Molecular Weight (calculated)

36728.5 Da

IEP (calculated)

9.686

GRAVY (calculated)

-0.660

Length

338 amino acids

Sequence
(BLAST)

001: MGSRKMASQP GRGTGGGGDA GTSQRGQVQS LARQGSLYSL TLDEVQNHLG EPLQSMNLDE LLRTVFPDDM EPDGATTSQY VPSSSLLRQG SITMPTELSK
101: KTVDEVWKGI QDAPKRSVQG SGRRKRERQP TLGEMTLEDF LVQAGVVSQG FLKDTSDAGN LGLVGREATA AGAADLTSGA QWLGHYQQQI AAAAIDTHQH
201: GQQIVPAAYM PIQFVPQPLN VVGPGATLGS AYSDGQSTSP MISPISDSQT PGRKRGVSGD VPNKFVERRQ KRMIKNRESA ARSRARKQAY TNELENKVSR
301: LEEENERLKK QKELNMMLCS VPLPEPKYQL RRTCSAAF

Best Arabidopsis Sequence Match ( AT3G56850.1 )
(BLAST)

001: MDSQRGIVEQ AKSQSLNRQS SLYSLTLDEV QNHLGSSGKA LGSMNLDELL KSVCSVEANQ PSSMAVNGGA AAQEGLSRQG SLTLPRDLSK KTVDEVWKDI
101: QQNKNGGSAH ERRDKQPTLG EMTLEDLLLK AGVVTETIPG SNHDGPVGGG SAGSGAGLGQ NITQVGPWIQ YHQLPSMPQP QAFMPYPVSD MQAMVSQSSL
201: MGGLSDTQTP GRKRVASGEV VEKTVERRQK RMIKNRESAA RSRARKQAYT HELEIKVSRL EEENERLRKQ KEVEKILPSV PPPDPKRQLR RTSSAPF

Arabidopsis Description

DPBF3ABSCISIC ACID-INSENSITIVE 5-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LES3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.