Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G273100.1 | Wheat | nucleus | 99.21 | 99.6 |
| TraesCS1B01G282800.1 | Wheat | nucleus | 99.21 | 99.6 |
| HORVU1Hr1G074960.8 | Barley | mitochondrion, nucleus, plastid | 79.45 | 80.08 |
| Os05t0437700-01 | Rice | plastid | 69.17 | 70.85 |
| EES18296 | Sorghum | nucleus, plastid | 69.96 | 66.29 |
| Zm00001d038311_P001 | Maize | nucleus | 63.24 | 62.99 |
| TraesCS3A01G378700.1 | Wheat | nucleus | 57.31 | 56.42 |
| GSMUA_Achr9P08900_001 | Banana | nucleus | 46.64 | 47.58 |
| GSMUA_Achr3P22470_001 | Banana | nucleus | 45.85 | 45.31 |
| KRH10463 | Soybean | nucleus | 22.53 | 43.85 |
| KRH43979 | Soybean | nucleus | 25.69 | 40.62 |
| GSMUA_Achr10P... | Banana | nucleus | 42.29 | 40.07 |
| GSMUA_Achr2P20490_001 | Banana | nucleus | 38.34 | 39.92 |
| VIT_18s0072g00470.t01 | Wine grape | nucleus, plastid | 40.71 | 37.45 |
| VIT_12s0055g00420.t01 | Wine grape | nucleus | 41.9 | 35.45 |
| Solyc01g104650.2.1 | Tomato | nucleus | 40.71 | 34.68 |
| PGSC0003DMT400076576 | Potato | nucleus | 38.74 | 34.51 |
| KRH58352 | Soybean | nucleus | 29.64 | 33.48 |
| CDY54481 | Canola | nucleus | 37.55 | 33.22 |
| CDY22311 | Canola | nucleus, plastid | 34.78 | 33.08 |
| KRH42235 | Soybean | nucleus, plastid | 30.83 | 32.64 |
| Bra033719.1-P | Field mustard | nucleus, plastid | 33.99 | 32.33 |
| TraesCS4A01G128900.1 | Wheat | nucleus | 28.46 | 32.0 |
| AT1G03970.1 | Thale cress | nucleus, plastid | 33.6 | 31.48 |
| KRH35126 | Soybean | nucleus | 30.43 | 31.17 |
| Solyc04g071510.2.1 | Tomato | nucleus, plastid | 37.94 | 31.17 |
| Bra015281.1-P | Field mustard | nucleus, plastid | 32.41 | 30.6 |
| CDY18197 | Canola | nucleus, plastid | 32.41 | 30.48 |
| CDX89852 | Canola | nucleus, plastid | 32.02 | 30.22 |
| AT5G44080.1 | Thale cress | nucleus | 35.97 | 28.89 |
| TraesCS2A01G099400.1 | Wheat | nucleus | 27.67 | 25.55 |
| TraesCS1A01G306300.1 | Wheat | nucleus | 29.25 | 22.84 |
| TraesCS3A01G337200.1 | Wheat | nucleus | 30.04 | 22.49 |
| TraesCS5A01G141500.1 | Wheat | nucleus | 27.27 | 22.04 |
| TraesCS7A01G170600.1 | Wheat | nucleus | 28.85 | 21.28 |
| TraesCS3A01G371800.1 | Wheat | nucleus | 31.62 | 20.46 |
| TraesCS3A01G371900.3 | Wheat | nucleus | 30.43 | 20.16 |
| TraesCS3A01G372000.1 | Wheat | nucleus | 30.43 | 20.1 |
| TraesCS6A01G333600.2 | Wheat | nucleus | 27.67 | 20.0 |
| TraesCS3A01G372200.1 | Wheat | nucleus | 30.04 | 19.9 |
| TraesCS5A01G237200.2 | Wheat | nucleus | 28.06 | 19.29 |
| TraesCS3A01G372100.2 | Wheat | nucleus | 29.64 | 19.18 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 |
| PFAM:PF00170 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF175 | SMART:SM00338 |
| SUPFAM:SSF57959 | EnsemblPlantsGene:TraesCS1A01G273000 | EnsemblPlants:TraesCS1A01G273000.1 | InterPro:bZIP | TIGR:cd14707 | SEG:seg |
Description
No Description!
Coordinates
chr1A:+:466896731..466899471
Molecular Weight (calculated)
26635.2 Da
IEP (calculated)
6.123
GRAVY (calculated)
-0.640
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSRVMAAS SQPPPSGSSD LARFRSASGI GSMNMDDILR NIYGEAPPSG AGAPADPAPA PEAAAARRTA EEVWKEISAT GGLSAPAPAP APAGAGGGEA
101: GGAAVMTLED FLAREDDGRV TAVEGNMAVG FPDVGADVGA GVAGGRRRGG GAGGAGRARK RALMDPMDRA ATQRQKRMIK NRESAARSRE RKQAYIAELE
201: AQVTQLEEEH AELLREQEEQ NEKRLNELKE QAFQVVVRKK PSQDLRRTNS MEW
101: GGAAVMTLED FLAREDDGRV TAVEGNMAVG FPDVGADVGA GVAGGRRRGG GAGGAGRARK RALMDPMDRA ATQRQKRMIK NRESAARSRE RKQAYIAELE
201: AQVTQLEEEH AELLREQEEQ NEKRLNELKE QAFQVVVRKK PSQDLRRTNS MEW
001: MTSFQVMRSS NSRNSDLSRR ISSASTSSSS IRPQQQFRRD LTSVGYGGRN DGLYSSNSMT VEGILHDTFA SDPPAPTESS LLDASINLMD ASPAPMEITT
101: TTASDVVDHG GGTETTRGGK SVDEIWREMV SGEGKGMKEE TSEEIMTLED FLAKAAVEDE TAVTASAEDL DVKIPVTNYG FDHSAPPHNP FQMIDKVEGS
201: IVAFGNGLDV YGGGARGKRA RVMVEPLDKA AAQRQRRMIK NRESAARSRE RKQAYQVELE ALAAKLEEEN ELLSKEIEDK RKERYQKLME FVIPVVEKPK
301: QQPPRFLRRI RSLEW
101: TTASDVVDHG GGTETTRGGK SVDEIWREMV SGEGKGMKEE TSEEIMTLED FLAKAAVEDE TAVTASAEDL DVKIPVTNYG FDHSAPPHNP FQMIDKVEGS
201: IVAFGNGLDV YGGGARGKRA RVMVEPLDKA AAQRQRRMIK NRESAARSRE RKQAYQVELE ALAAKLEEEN ELLSKEIEDK RKERYQKLME FVIPVVEKPK
301: QQPPRFLRRI RSLEW
Arabidopsis Description
Basic leucine zipper transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9FNB9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.