Factsheet for TraesCS1A01G306300.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G317100.1	Wheat	nucleus	97.53	98.14
TraesCS1D01G306000.1	Wheat	nucleus	96.91	96.02
HORVU1Hr1G068760.1	Barley	nucleus	91.98	90.03
HORVU0Hr1G023640.4	Barley	nucleus	86.42	80.23
VIT_04s0069g01150.t01	Wine grape	nucleus	13.58	77.19
EES18419	Sorghum	nucleus	73.46	73.46
Os05t0489700-01	Rice	nucleus	75.62	73.13
Zm00001d010638_P001	Maize	nucleus	70.06	65.99
TraesCS3A01G337200.1	Wheat	nucleus	65.12	62.43
GSMUA_AchrUn_...	Banana	nucleus	52.47	62.04
GSMUA_Achr11P...	Banana	nucleus	45.37	60.49
VIT_13s0175g00120.t01	Wine grape	nucleus	55.56	55.38
KRH44714	Soybean	nucleus	50.93	51.08
KRH13203	Soybean	nucleus	47.22	50.66
KRH62689	Soybean	nucleus	49.07	50.32
KRH56272	Soybean	nucleus	48.77	50.0
TraesCS5A01G141500.1	Wheat	nucleus	48.15	49.84
TraesCS4A01G128900.1	Wheat	nucleus	34.26	49.33
TraesCS2A01G099400.1	Wheat	nucleus	41.67	49.27
VIT_12s0034g00110.t01	Wine grape	nucleus	14.51	47.47
TraesCS5A01G237200.2	Wheat	nucleus	34.88	30.71
TraesCS7A01G170600.1	Wheat	nucleus	32.41	30.61
TraesCS3A01G378700.1	Wheat	nucleus	24.07	30.35
TraesCS1A01G273000.1	Wheat	nucleus	22.84	29.25
Solyc01g009510.1.1	Tomato	nucleus	16.67	28.42
TraesCS6A01G333600.2	Wheat	nucleus	30.56	28.29
TraesCS3A01G371800.1	Wheat	nucleus	32.72	27.11
TraesCS3A01G371900.3	Wheat	nucleus	31.17	26.44
TraesCS3A01G372000.1	Wheat	nucleus	30.56	25.85
TraesCS3A01G372200.1	Wheat	nucleus	30.25	25.65
TraesCS3A01G372100.2	Wheat	nucleus	29.63	24.55

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827
PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF137	SMART:SM00338
SUPFAM:SSF57959	EnsemblPlantsGene:TraesCS1A01G306300	EnsemblPlants:TraesCS1A01G306300.1	InterPro:bZIP	TIGR:cd14707	SEG:seg

Description

No Description!

Coordinates

chr1A:+:498533249..498536575

Molecular Weight (calculated)

35050.7 Da

IEP (calculated)

8.767

GRAVY (calculated)

-0.695

Length

324 amino acids

Sequence
(BLAST)

001: MASQSQAGGG GGGGYAGPGQ RGQAQQGLGR QGSLYSLTLD EVQSQLTEPL LSMNLDELLK SVFPDGVDPV GGVAGQSEPA PGLLRQGSIT MPPDLSKKTV
101: DEVWKGIQDS PKRSGEEGSR RRRERQPTFG EMTLEDFLVK AGVVAEGHLK DPIDLPANMG AVGSSVIEAA APSLNPGAHW LQQYLEPQHP RMAGPFMASH
201: LGPQPLSVAT GAIMEPIYPD GQITSPMLDA LSDPQTPRRK RGASDGVTDK VVERRQKRMI KNRESAARSR ARKQAYTNEL ENKVSRLEEE NERLKKQKEL
301: DMMITSAPPP EPKYQLRRTS SAPV

Best Arabidopsis Sequence Match ( AT2G41070.4 )
(BLAST)

001: MSSQLKATYM GSIRGNIEEP ISQSLTRQNS LYSLKLHEVQ THLGSSGKPL GSMNLDELLK TVLPPAEEGL VRQGSLTLPR DLSKKTVDEV WRDIQQDKNG
101: NGTSTTTTHK QPTLGEITLE DLLLRAGVVT ETVVPQENVV NIASNGQWVE YHHQPQQQQG FMTYPVCEMQ DMVMMGGLSD TPQAPGRKRV AGEIVEKTVE
201: RRQKRMIKNR ESAARSRARK QAYTHELEIK VSRLEEENEK LRRLKEVEKI LPSEPPPDPK WKLRRTNSAS L

Arabidopsis Description

EELBasic-leucine zipper (bZIP) transcription factor family protein [Source:TAIR;Acc:AT2G41070]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.