Factsheet for Os05t0489700-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G317100.1	Wheat	nucleus	74.03	77.02
TraesCS1D01G306000.1	Wheat	nucleus	74.63	76.45
TraesCS1A01G306300.1	Wheat	nucleus	73.13	75.62
HORVU1Hr1G068760.1	Barley	nucleus	74.63	75.53
VIT_04s0069g01150.t01	Wine grape	nucleus	12.84	75.44
EES18419	Sorghum	nucleus	72.54	75.0
HORVU0Hr1G023640.4	Barley	nucleus	71.64	68.77
Zm00001d010638_P001	Maize	nucleus	68.96	67.15
GSMUA_AchrUn_...	Banana	nucleus	51.64	63.14
GSMUA_Achr11P...	Banana	nucleus	44.48	61.32
Os01t0813100-00	Rice	nucleus	60.9	58.96
VIT_13s0175g00120.t01	Wine grape	nucleus	53.43	55.08
KRH44714	Soybean	nucleus	50.45	52.32
KRH13203	Soybean	nucleus	46.57	51.66
Os07t0686100-01	Rice	nucleus	41.79	51.09
KRH62689	Soybean	nucleus	47.16	50.0
KRH56272	Soybean	nucleus	46.57	49.37
VIT_12s0034g00110.t01	Wine grape	nucleus	13.73	46.46
Os03t0322700-00	Rice	nucleus	33.13	45.49
Os06t0211200-01	Rice	nucleus	32.84	33.95
Os08t0472000-01	Rice	nucleus	30.75	32.39
Os09t0456200-01	Rice	nucleus	35.52	31.65
Os02t0766700-01	Rice	nucleus	33.13	31.09
Os01t0859300-01	Rice	nucleus	29.55	30.65
Os01t0867300-01	Rice	nucleus	23.88	30.08
Solyc01g009510.1.1	Tomato	nucleus	15.82	27.89
Os05t0437700-01	Rice	plastid	19.7	26.72

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	EntrezGene:4339158	ProteinID:AAT77290.1	EMBL:AK063398	ProteinID:BAF17807.1
ProteinID:BAS94644.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EMBL:HQ858813	InterPro:IPR004827
EnsemblPlantsGene:Os05g0489700	EnsemblPlants:Os05t0489700-01	PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952
PANTHER:PTHR22952:SF137	UniProt:Q6AVM5	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI00003FE5EF	RefSeq:XP_015638733.1
InterPro:bZIP	SEG:seg	:	:	:	:

Description

b-ZIP TRANSCRIPTION FACTOR 42Similar to BZIP protein BZO2H3 (Fragment). (Os05t0489700-01)

Coordinates

chr5:+:24062649..24065939

Molecular Weight (calculated)

35577.2 Da

IEP (calculated)

6.543

GRAVY (calculated)

-0.597

Length

335 amino acids

Sequence
(BLAST)

001: MIQAMASHAG GSGGGGGGSG RDAGSAQRGP MQGLARQGSL YGLTLNEVQS QLGEPLLSMN LDELLKSVFP DGADLDGGGG GGGIAGQSQP ALGLQRQGSI
101: TMPPELSKKT VDEVWKGIQD VPKRGAEEGG RWRRERQPTL GEMTLEDFLV KAGVVTDPND LPGNMDVVGG AAAAAAGTSD LNAGAQWLQQ YHQQALEPQH
201: PSIGAPYMAT HLAPQPLAVA TGAVLDPIYS DGQITSPMLG ALSDPQTPGR KRCATGEIAD KLVERRQKRM IKNRESAARS RARKQAYTNE LENKVLRLEE
301: ENERLKKQKE LDEILNSAPP PEPKYQLRRT SSAAF

Best Arabidopsis Sequence Match ( AT3G56850.1 )
(BLAST)

001: MDSQRGIVEQ AKSQSLNRQS SLYSLTLDEV QNHLGSSGKA LGSMNLDELL KSVCSVEANQ PSSMAVNGGA AAQEGLSRQG SLTLPRDLSK KTVDEVWKDI
101: QQNKNGGSAH ERRDKQPTLG EMTLEDLLLK AGVVTETIPG SNHDGPVGGG SAGSGAGLGQ NITQVGPWIQ YHQLPSMPQP QAFMPYPVSD MQAMVSQSSL
201: MGGLSDTQTP GRKRVASGEV VEKTVERRQK RMIKNRESAA RSRARKQAYT HELEIKVSRL EEENERLRKQ KEVEKILPSV PPPDPKRQLR RTSSAPF

Arabidopsis Description

DPBF3ABSCISIC ACID-INSENSITIVE 5-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LES3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.