Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_04s0069g01150.t01 | Wine grape | nucleus | 55.56 | 96.49 |
| HORVU2Hr1G017020.2 | Barley | nucleus | 43.43 | 38.39 |
| GSMUA_Achr6P15970_001 | Banana | nucleus | 45.45 | 23.2 |
| GSMUA_Achr8P21560_001 | Banana | nucleus | 46.46 | 19.33 |
| TraesCS4D01G177700.1 | Wheat | nucleus | 43.43 | 19.28 |
| TraesCS4B01G175800.1 | Wheat | nucleus | 43.43 | 19.11 |
| TraesCS4A01G128900.1 | Wheat | nucleus | 43.43 | 19.11 |
| GSMUA_Achr10P... | Banana | nucleus | 43.43 | 18.38 |
| VIT_06s0009g01790.t01 | Wine grape | nucleus | 45.45 | 18.15 |
| GSMUA_Achr11P... | Banana | nucleus | 43.43 | 17.7 |
| Os03t0322700-00 | Rice | nucleus | 43.43 | 17.62 |
| GSMUA_AchrUn_... | Banana | nucleus | 48.48 | 17.52 |
| KXG39483 | Sorghum | nucleus | 41.41 | 16.8 |
| Os07t0686100-01 | Rice | nucleus | 45.45 | 16.42 |
| Solyc01g009510.1.1 | Tomato | nucleus | 31.31 | 16.32 |
| VIT_13s0175g00120.t01 | Wine grape | nucleus | 53.54 | 16.31 |
| TraesCS2D01G098700.1 | Wheat | nucleus | 43.43 | 15.81 |
| Zm00001d022550_P001 | Maize | nucleus | 45.45 | 15.79 |
| TraesCS2A01G099400.1 | Wheat | nucleus | 42.42 | 15.33 |
| TraesCS2B01G115700.1 | Wheat | nucleus | 42.42 | 15.33 |
| TraesCS1B01G317100.1 | Wheat | nucleus | 47.47 | 14.6 |
| KRH62689 | Soybean | nucleus | 46.46 | 14.56 |
| TraesCS1A01G306300.1 | Wheat | nucleus | 47.47 | 14.51 |
| TraesCS1D01G306000.1 | Wheat | nucleus | 47.47 | 14.37 |
| KRH56272 | Soybean | nucleus | 45.45 | 14.24 |
| HORVU1Hr1G068760.1 | Barley | nucleus | 47.47 | 14.2 |
| EES18419 | Sorghum | nucleus | 46.46 | 14.2 |
| EES03785 | Sorghum | nucleus | 47.47 | 14.11 |
| TraesCS3D01G330300.1 | Wheat | nucleus | 47.47 | 13.95 |
| TraesCS3A01G337200.1 | Wheat | nucleus | 47.47 | 13.91 |
| OQU90534 | Sorghum | nucleus | 44.44 | 13.84 |
| Os05t0489700-01 | Rice | nucleus | 46.46 | 13.73 |
| TraesCS3B01G368300.1 | Wheat | nucleus | 47.47 | 13.7 |
| Zm00001d043117_P002 | Maize | nucleus | 45.45 | 13.51 |
| GSMUA_Achr10P... | Banana | mitochondrion, nucleus | 26.26 | 12.87 |
| VIT_18s0001g04500.t01 | Wine grape | nucleus | 40.4 | 12.86 |
| Zm00001d010638_P001 | Maize | nucleus | 44.44 | 12.79 |
| TraesCS5B01G139800.1 | Wheat | nucleus | 40.4 | 12.78 |
| TraesCS5A01G141500.1 | Wheat | nucleus | 40.4 | 12.78 |
| HORVU5Hr1G045180.1 | Barley | nucleus | 40.4 | 12.78 |
| HORVU3Hr1G079640.5 | Barley | nucleus | 43.43 | 12.76 |
| Os01t0813100-00 | Rice | nucleus | 43.43 | 12.43 |
| TraesCS5D01G150700.1 | Wheat | nucleus | 39.39 | 12.34 |
| HORVU0Hr1G023640.4 | Barley | nucleus | 43.43 | 12.32 |
| VIT_18s0072g00470.t01 | Wine grape | nucleus, plastid | 32.32 | 11.64 |
| VIT_06s0080g00340.t01 | Wine grape | nucleus | 35.35 | 10.8 |
| VIT_12s0055g00420.t01 | Wine grape | nucleus | 32.32 | 10.7 |
| VIT_03s0063g00310.t01 | Wine grape | nucleus | 35.35 | 8.56 |
| VIT_08s0007g03420.t01 | Wine grape | nucleus | 34.34 | 8.5 |
| VIT_18s0001g10450.t01 | Wine grape | nucleus | 36.36 | 8.05 |
| Zm00001d012538_P001 | Maize | nucleus | 20.2 | 7.14 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | ProteinID:CCB48786 | ProteinID:CCB48786.1 | ncoils:Coil | UniProt:F6H993 |
| EMBL:FN595497 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 | PFAM:PF00170 | PFscan:PS50217 |
| PANTHER:PTHR22952 | PANTHER:PTHR22952:SF359 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI000210A0E7 | ArrayExpress:VIT_12s0034g00110 |
| EnsemblPlantsGene:VIT_12s0034g00110 | EnsemblPlants:VIT_12s0034g00110.t01 | InterPro:bZIP | SEG:seg | : | : |
Description
No Description!
Coordinates
chr12:+:15485471..15491224
Molecular Weight (calculated)
11757.5 Da
IEP (calculated)
11.302
GRAVY (calculated)
-0.988
Length
99 amino acids
Sequence
(BLAST)
(BLAST)
1: MIEKTIERRQ KRMIKNWESA THSRARKQAY TNELENKVSR LEEENERLRK RKVRSLSSHF KCIYIGCKGN LFAKRREIIM LKKTKSKTMK ITSVNSLGG
001: MDSQRGIVEQ AKSQSLNRQS SLYSLTLDEV QNHLGSSGKA LGSMNLDELL KSVCSVEANQ PSSMAVNGGA AAQEGLSRQG SLTLPRDLSK KTVDEVWKDI
101: QQNKNGGSAH ERRDKQPTLG EMTLEDLLLK AGVVTETIPG SNHDGPVGGG SAGSGAGLGQ NITQVGPWIQ YHQLPSMPQP QAFMPYPVSD MQAMVSQSSL
201: MGGLSDTQTP GRKRVASGEV VEKTVERRQK RMIKNRESAA RSRARKQAYT HELEIKVSRL EEENERLRKQ KEVEKILPSV PPPDPKRQLR RTSSAPF
101: QQNKNGGSAH ERRDKQPTLG EMTLEDLLLK AGVVTETIPG SNHDGPVGGG SAGSGAGLGQ NITQVGPWIQ YHQLPSMPQP QAFMPYPVSD MQAMVSQSSL
201: MGGLSDTQTP GRKRVASGEV VEKTVERRQK RMIKNRESAA RSRARKQAYT HELEIKVSRL EEENERLRKQ KEVEKILPSV PPPDPKRQLR RTSSAPF
Arabidopsis Description
DPBF3ABSCISIC ACID-INSENSITIVE 5-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LES3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.