Factsheet for HORVU5Hr1G045180.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G139800.1	Wheat	nucleus	96.17	96.17
TraesCS5A01G141500.1	Wheat	nucleus	95.85	95.85
TraesCS5D01G150700.1	Wheat	nucleus	89.14	88.29
VIT_04s0069g01150.t01	Wine grape	nucleus	11.82	64.91
GSMUA_Achr11P...	Banana	nucleus	38.34	49.38
HORVU2Hr1G017020.2	Barley	nucleus	17.25	48.21
GSMUA_AchrUn_...	Banana	nucleus	41.53	47.45
HORVU1Hr1G068760.1	Barley	nucleus	47.6	45.02
VIT_13s0175g00120.t01	Wine grape	nucleus	46.01	44.31
KRH56272	Soybean	nucleus	44.41	43.99
KRH62689	Soybean	nucleus	44.41	43.99
KRH44714	Soybean	nucleus	42.17	40.87
HORVU0Hr1G023640.4	Barley	nucleus	45.37	40.69
VIT_12s0034g00110.t01	Wine grape	nucleus	12.78	40.4
HORVU3Hr1G079640.5	Barley	nucleus	43.13	40.06
KRH13203	Soybean	nucleus	37.06	38.41
HORVU7Hr1G035500.2	Barley	nucleus	30.35	28.53
HORVU3Hr1G083250.2	Barley	nucleus	19.81	28.05
HORVU5Hr1G068230.1	Barley	nucleus	29.71	25.34
HORVU6Hr1G080670.1	Barley	nucleus	27.8	24.37
HORVU1Hr1G074960.8	Barley	mitochondrion, nucleus, plastid	19.49	24.3
Solyc01g009510.1.1	Tomato	nucleus	14.38	23.68
HORVU3Hr1G084360.2	Barley	nucleus	29.07	21.51

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	UniProt:A1XXJ1	ncoils:Coil	EMBL:DQ786410	GO:GO:0003674
GO:GO:0003700	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	EnsemblPlantsGene:HORVU5Hr1G045180	EnsemblPlants:HORVU5Hr1G045180.1	InterPro:IPR004827	PFAM:PF00170	ScanProsite:PS00036
PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF137	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI0000ED5D1B
InterPro:bZIP	SEG:seg	:	:	:	:

Description

ABA responsive element binding factor 3 [Source:UniProtKB/TrEMBL;Acc:A1XXJ1]

Coordinates

chrchr5H:-:349701419..349705399

Molecular Weight (calculated)

34867.3 Da

IEP (calculated)

6.922

GRAVY (calculated)

-0.667

Length

313 amino acids

Sequence
(BLAST)

001: MSCEGGGTAI TGKKRDRAHI QTLVREGSLY NLTLSEVESH LGAPLLSMNL DEFVRSVLPD EKNLPLPNGA GNSGSQSTSA FGLERQGSSI TVPLPLSKKT
101: VDEIWRDIQQ DQDNSDDEKR SSGCEAQMSF GEITLEEFLQ RAGIVTGQCQ KDAEELIDFV GTGESAHLMT RVQDFPQGTS AIDAYIVRQS IAQPLSVAIP
201: STMDAIYPDR QMSISSSLEL SDLQSPSRKR MSSQDVVYKV ADRRQKRMIK NRESAARSRA RKQAYTNELE CKLSCLEEEN KRLKREKELD MLLKSAPPPE
301: PKKHLRRTRS TSF

Best Arabidopsis Sequence Match ( AT2G41070.4 )
(BLAST)

001: MSSQLKATYM GSIRGNIEEP ISQSLTRQNS LYSLKLHEVQ THLGSSGKPL GSMNLDELLK TVLPPAEEGL VRQGSLTLPR DLSKKTVDEV WRDIQQDKNG
101: NGTSTTTTHK QPTLGEITLE DLLLRAGVVT ETVVPQENVV NIASNGQWVE YHHQPQQQQG FMTYPVCEMQ DMVMMGGLSD TPQAPGRKRV AGEIVEKTVE
201: RRQKRMIKNR ESAARSRARK QAYTHELEIK VSRLEEENEK LRRLKEVEKI LPSEPPPDPK WKLRRTNSAS L

Arabidopsis Description

EELBasic-leucine zipper (bZIP) transcription factor family protein [Source:TAIR;Acc:AT2G41070]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.