Factsheet for HORVU6Hr1G080670.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 2
endoplasmic reticulum 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G333600.2	Wheat	nucleus	93.56	95.43
TraesCS6B01G364000.1	Wheat	nucleus	93.28	94.87
TraesCS6D01G312800.1	Wheat	nucleus	94.68	93.89
Os02t0766700-01	Rice	nucleus	75.07	75.07
EES07580	Sorghum	nucleus	70.87	73.12
Zm00001d018178_P001	Maize	nucleus	68.91	70.09
HORVU7Hr1G035500.2	Barley	nucleus	58.26	62.46
KRH52002	Soybean	cytosol	15.69	57.14
CDY65560	Canola	nucleus	46.78	55.3
CDY28083	Canola	nucleus	33.61	50.63
CDY17109	Canola	nucleus	47.06	50.15
CDY18575	Canola	nucleus	47.34	48.01
Bra040260.1-P	Field mustard	nucleus	48.74	47.8
GSMUA_Achr6P30550_001	Banana	nucleus	53.22	47.74
CDY51041	Canola	nucleus	43.7	47.27
CDX99242	Canola	nucleus	46.78	47.18
CDY68227	Canola	nucleus	45.94	46.99
CDX69020	Canola	nucleus	45.66	46.57
Bra022409.1-P	Field mustard	nucleus	45.94	46.33
CDX92320	Canola	nucleus	45.94	46.2
HORVU5Hr1G068230.1	Barley	nucleus	47.34	46.05
CDY63041	Canola	nucleus	45.66	46.05
Bra037533.1-P	Field mustard	nucleus	49.02	45.1
CDX82302	Canola	nucleus	45.94	45.05
Bra001742.1-P	Field mustard	nucleus	44.54	44.79
VIT_03s0063g00310.t01	Wine grape	nucleus	51.26	44.74
GSMUA_Achr5P24570_001	Banana	nucleus	47.9	44.07
KRH61298	Soybean	nucleus	51.26	43.88
GSMUA_Achr5P05690_001	Banana	nucleus	49.86	43.73
Bra018800.1-P	Field mustard	nucleus	44.54	43.21
VIT_18s0001g10450.t01	Wine grape	nucleus	54.06	43.18
CDY58256	Canola	nucleus	47.06	42.97
GSMUA_Achr9P27130_001	Banana	nucleus	48.46	42.93
GSMUA_Achr6P04270_001	Banana	nucleus	45.94	42.82
PGSC0003DMT400059040	Potato	nucleus	43.14	42.08
Solyc04g078840.2.1	Tomato	nucleus	52.38	41.83
AT1G45249.6	Thale cress	nucleus	50.14	41.53
PGSC0003DMT400020670	Potato	nucleus	52.1	41.06
KRH50289	Soybean	nucleus	48.74	41.04
Solyc01g108080.2.1	Tomato	nucleus	47.34	40.82
AT3G19290.3	Thale cress	nucleus	49.3	40.74
CDX72445	Canola	nucleus	46.78	40.73
Solyc10g050210.1.1	Tomato	nucleus	43.42	39.95
PGSC0003DMT400066603	Potato	nucleus	46.22	39.86
KRH71134	Soybean	nucleus	48.46	39.41
GSMUA_Achr3P07000_001	Banana	nucleus	43.98	38.96
PGSC0003DMT400015892	Potato	nucleus	45.1	38.89
Solyc11g044560.1.1	Tomato	nucleus	42.86	38.35
AT1G49720.2	Thale cress	nucleus	41.74	36.97
AT4G34000.2	Thale cress	nucleus	46.78	36.78
Bra011485.1-P	Field mustard	nucleus	44.54	36.22
KRH52003	Soybean	nucleus	33.05	35.87
HORVU2Hr1G017020.2	Barley	nucleus	11.2	35.71
Bra017621.1-P	Field mustard	cytosol	26.89	32.21
AT5G42910.1	Thale cress	nucleus	32.77	31.62
HORVU1Hr1G068760.1	Barley	nucleus	27.73	29.91
HORVU3Hr1G083250.2	Barley	nucleus	18.49	29.86
HORVU3Hr1G079640.5	Barley	nucleus	26.89	28.49
HORVU3Hr1G084360.2	Barley	nucleus	33.33	28.13
CDY22378	Canola	nucleus	31.09	28.1
CDX71528	Canola	nucleus	30.53	27.88
HORVU5Hr1G045180.1	Barley	nucleus	24.37	27.8
HORVU0Hr1G023640.4	Barley	nucleus	26.33	26.93
Bra033649.1-P	Field mustard	nucleus	31.09	26.81
HORVU1Hr1G074960.8	Barley	mitochondrion, nucleus, plastid	17.09	24.3

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003700	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0006950
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009414
GO:GO:0009628	GO:GO:0009651	GO:GO:0009719	GO:GO:0009738	GO:GO:0009987	EnsemblPlantsGene:HORVU6Hr1G080670
EnsemblPlants:HORVU6Hr1G080670.1	InterPro:IPR004827	UniProt:M0WPT5	PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217
PANTHER:PTHR22952	PANTHER:PTHR22952:SF103	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI0002955065	InterPro:bZIP
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:542474737..542479719

Molecular Weight (calculated)

38593.3 Da

IEP (calculated)

10.262

GRAVY (calculated)

-0.625

Length

357 amino acids

Sequence
(BLAST)

001: MDFPGGSGRP HQHQHQHQHQ PLPPMTPLPL TRQGSSVYSL TFDEFQSALG GPGKDFGSMN MDELLRNIWT AEESQAIGAG GAGPSTAAAG PDHGGIQRQG
101: SLTLPRTLSQ KTVDEVWRDM MFFGGPSAPA AAEAPPPAQR QQTLGEVTLE EFLVRAGVVR EDMPGPPAPV SPAPVAQAPP PQPQMLFPQS NMFAPMVNPL
201: SLANGLMTGA YGQGGGGGGG GAAAMVSPSP ARPVMSNGYG KMEGLNLSSL SPPPMPYVFN GGLRGRKPPA MEKVVERRQR RMIKNRESAA RSRQRKQSYM
301: MELETEVAKL KERNEELQRK QAEMLERQKN EVFEKVSRQA GPTSKRICLR RTLTGPW

Best Arabidopsis Sequence Match ( AT3G56850.1 )
(BLAST)

001: MDSQRGIVEQ AKSQSLNRQS SLYSLTLDEV QNHLGSSGKA LGSMNLDELL KSVCSVEANQ PSSMAVNGGA AAQEGLSRQG SLTLPRDLSK KTVDEVWKDI
101: QQNKNGGSAH ERRDKQPTLG EMTLEDLLLK AGVVTETIPG SNHDGPVGGG SAGSGAGLGQ NITQVGPWIQ YHQLPSMPQP QAFMPYPVSD MQAMVSQSSL
201: MGGLSDTQTP GRKRVASGEV VEKTVERRQK RMIKNRESAA RSRARKQAYT HELEIKVSRL EEENERLRKQ KEVEKILPSV PPPDPKRQLR RTSSAPF

Arabidopsis Description

DPBF3ABSCISIC ACID-INSENSITIVE 5-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LES3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.