Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G411300.1 | Wheat | nucleus | 87.78 | 77.6 |
| TraesCS3D01G371900.1 | Wheat | nucleus | 87.33 | 77.2 |
| TraesCS3A01G378700.1 | Wheat | nucleus | 87.33 | 75.1 |
| Zm00001d042721_P001 | Maize | nucleus | 72.85 | 61.92 |
| EES03943 | Sorghum | nucleus | 71.49 | 60.31 |
| Os01t0867300-01 | Rice | nucleus | 66.97 | 55.64 |
| Zm00001d012273_P001 | Maize | plastid | 59.73 | 54.1 |
| HORVU1Hr1G074960.8 | Barley | mitochondrion, nucleus, plastid | 53.39 | 47.01 |
| GSMUA_Achr3P22470_001 | Banana | nucleus | 52.04 | 44.92 |
| GSMUA_Achr9P08900_001 | Banana | nucleus | 47.06 | 41.94 |
| GSMUA_Achr10P... | Banana | nucleus | 48.87 | 40.45 |
| GSMUA_Achr2P20490_001 | Banana | nucleus | 43.44 | 39.51 |
| KRH10463 | Soybean | nucleus | 22.17 | 37.69 |
| VIT_18s0072g00470.t01 | Wine grape | nucleus, plastid | 45.25 | 36.36 |
| KRH43979 | Soybean | nucleus | 25.79 | 35.62 |
| PGSC0003DMT400076576 | Potato | nucleus | 42.53 | 33.1 |
| CDY22311 | Canola | nucleus, plastid | 38.91 | 32.33 |
| VIT_12s0055g00420.t01 | Wine grape | nucleus | 43.44 | 32.11 |
| Bra033719.1-P | Field mustard | nucleus, plastid | 38.46 | 31.95 |
| Solyc01g104650.2.1 | Tomato | nucleus | 42.53 | 31.65 |
| CDY54481 | Canola | nucleus | 40.72 | 31.47 |
| KRH58352 | Soybean | nucleus | 31.67 | 31.25 |
| KRH35126 | Soybean | nucleus | 34.39 | 30.77 |
| AT1G03970.1 | Thale cress | nucleus, plastid | 37.56 | 30.74 |
| Bra015281.1-P | Field mustard | nucleus, plastid | 37.1 | 30.6 |
| CDY18197 | Canola | nucleus, plastid | 37.1 | 30.48 |
| CDX89852 | Canola | nucleus, plastid | 36.65 | 30.22 |
| Solyc04g071510.2.1 | Tomato | nucleus, plastid | 42.08 | 30.19 |
| KRH42235 | Soybean | nucleus, plastid | 32.58 | 30.13 |
| HORVU2Hr1G017020.2 | Barley | nucleus | 14.93 | 29.46 |
| AT5G44080.1 | Thale cress | nucleus | 40.72 | 28.57 |
| HORVU3Hr1G079640.5 | Barley | nucleus | 31.67 | 20.77 |
| HORVU7Hr1G035500.2 | Barley | nucleus | 31.22 | 20.72 |
| HORVU1Hr1G068760.1 | Barley | nucleus | 30.77 | 20.54 |
| HORVU5Hr1G045180.1 | Barley | nucleus | 28.05 | 19.81 |
| HORVU0Hr1G023640.4 | Barley | nucleus | 30.32 | 19.2 |
| HORVU5Hr1G068230.1 | Barley | nucleus | 31.22 | 18.8 |
| HORVU6Hr1G080670.1 | Barley | nucleus | 29.86 | 18.49 |
| HORVU3Hr1G084360.2 | Barley | nucleus | 30.77 | 16.08 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | UniProt:A0A287LZP8 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009719 | GO:GO:0009789 |
| GO:GO:0009987 | GO:GO:0043565 | GO:GO:0045893 | GO:GO:1901002 | GO:GO:1902584 | EnsemblPlantsGene:HORVU3Hr1G083250 |
| EnsemblPlants:HORVU3Hr1G083250.2 | InterPro:IPR004827 | PFAM:PF00170 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 |
| PANTHER:PTHR22952:SF175 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI000B47E6CA | InterPro:bZIP | SEG:seg |
Description
No Description!
Coordinates
chrchr3H:+:602641085..602642135
Molecular Weight (calculated)
23339.3 Da
IEP (calculated)
6.824
GRAVY (calculated)
-0.692
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSRVMASS KPSHTASDLA RFAQAAGRPG GGGGSGLGSM NVEELLRGIY GDAPTPAPDR PASPPVPPPP AAVTARRTAD EVWREITGGS GGEEEASAGG
101: AAEMTLEDFL AREDGAVVRA PGPSSAAPEE HAATPTTGFI GGARGGGVRG RKRQLLDPMD RAAMQRQKRM IKNRESAARS RERKQAYIAE LESLVTQLEE
201: ENAHLSKEQE EANQRRLKEF L
101: AAEMTLEDFL AREDGAVVRA PGPSSAAPEE HAATPTTGFI GGARGGGVRG RKRQLLDPMD RAAMQRQKRM IKNRESAARS RERKQAYIAE LESLVTQLEE
201: ENAHLSKEQE EANQRRLKEF L
001: MTSFQVMRSS NSRNSDLSRR ISSASTSSSS IRPQQQFRRD LTSVGYGGRN DGLYSSNSMT VEGILHDTFA SDPPAPTESS LLDASINLMD ASPAPMEITT
101: TTASDVVDHG GGTETTRGGK SVDEIWREMV SGEGKGMKEE TSEEIMTLED FLAKAAVEDE TAVTASAEDL DVKIPVTNYG FDHSAPPHNP FQMIDKVEGS
201: IVAFGNGLDV YGGGARGKRA RVMVEPLDKA AAQRQRRMIK NRESAARSRE RKQAYQVELE ALAAKLEEEN ELLSKEIEDK RKERYQKLME FVIPVVEKPK
301: QQPPRFLRRI RSLEW
101: TTASDVVDHG GGTETTRGGK SVDEIWREMV SGEGKGMKEE TSEEIMTLED FLAKAAVEDE TAVTASAEDL DVKIPVTNYG FDHSAPPHNP FQMIDKVEGS
201: IVAFGNGLDV YGGGARGKRA RVMVEPLDKA AAQRQRRMIK NRESAARSRE RKQAYQVELE ALAAKLEEEN ELLSKEIEDK RKERYQKLME FVIPVVEKPK
301: QQPPRFLRRI RSLEW
Arabidopsis Description
Basic leucine zipper transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9FNB9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.