Factsheet for Solyc04g071510.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 5
plastid 4
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0072g00470.t01	Wine grape	nucleus, plastid	56.49	63.27
KRH35126	Soybean	nucleus	42.21	52.63
CDY22311	Canola	nucleus, plastid	41.88	48.5
CDY54481	Canola	nucleus	44.81	48.25
Bra033719.1-P	Field mustard	nucleus, plastid	41.56	48.12
AT5G44080.1	Thale cress	nucleus	45.78	44.76
GSMUA_Achr3P22470_001	Banana	nucleus	37.01	44.53
GSMUA_Achr9P08900_001	Banana	nucleus	35.39	43.95
Bra015281.1-P	Field mustard	nucleus, plastid	37.99	43.66
CDY18197	Canola	nucleus, plastid	37.99	43.49
CDX89852	Canola	nucleus, plastid	37.66	43.28
GSMUA_Achr2P20490_001	Banana	nucleus	33.44	42.39
HORVU3Hr1G083250.2	Barley	nucleus	30.19	42.08
TraesCS3D01G371900.1	Wheat	nucleus	34.09	42.0
AT1G03970.1	Thale cress	nucleus, plastid	36.69	41.85
TraesCS3B01G411300.1	Wheat	nucleus	33.77	41.6
GSMUA_Achr10P...	Banana	nucleus	36.04	41.57
TraesCS3A01G378700.1	Wheat	nucleus	34.42	41.25
Zm00001d042721_P001	Maize	nucleus	34.42	40.77
EES03943	Sorghum	nucleus	34.42	40.46
Solyc01g104650.2.1	Tomato	nucleus	38.96	40.4
TraesCS1D01G273100.1	Wheat	nucleus	31.17	38.1
TraesCS1B01G282800.1	Wheat	nucleus	31.17	38.1
TraesCS1A01G273000.1	Wheat	nucleus	31.17	37.94
Os01t0867300-01	Rice	nucleus	32.47	37.59
EES18296	Sorghum	nucleus, plastid	31.82	36.7
Solyc01g008980.2.1	Tomato	nucleus	17.21	36.3
Zm00001d038311_P001	Maize	nucleus	29.87	36.22
Os05t0437700-01	Rice	plastid	28.57	35.63
Zm00001d012273_P001	Maize	plastid	26.95	34.02
HORVU1Hr1G074960.8	Barley	mitochondrion, nucleus, plastid	27.27	33.47
Solyc10g081350.1.1	Tomato	nucleus	26.62	23.43
Solyc01g009510.1.1	Tomato	nucleus	14.29	23.16
Solyc10g050210.1.1	Tomato	nucleus	26.95	21.39
Solyc10g076920.1.1	Tomato	nucleus	19.48	21.2
Solyc01g108080.2.1	Tomato	nucleus	27.6	20.53
Solyc11g044560.1.1	Tomato	nucleus	26.3	20.3
Solyc09g009490.2.1	Tomato	nucleus	27.27	19.72
Solyc04g078840.2.1	Tomato	nucleus	28.25	19.46

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827
UniProt:K4BTE3	PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF184
SMART:SM00338	SUPFAM:SSF57959	EnsemblPlantsGene:Solyc04g071510.2	EnsemblPlants:Solyc04g071510.2.1	UniParc:UPI0002766A0A	InterPro:bZIP
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4:-:58488408..58495581

Molecular Weight (calculated)

33876.1 Da

IEP (calculated)

7.273

GRAVY (calculated)

-0.579

Length

308 amino acids

Sequence
(BLAST)

001: MASTKLMASS ASRNSDRRKS SAASSSSSST MPNDLLNQQY SNNGSNNSSN LEATSMTVDG FLRNVYGEGQ GTEANTLLNA NITLLDAAGA ITPISDSETA
101: TVSGIPLVRR TVDDVWREIV EGKREQRRAA VAGCKEEAVD EIMTLEDFLV KAGAVEEEAL AGEGPVQGEV KVELGTERLS GGIFAFDSPY MAMPQQSVQG
201: YGNGIDVIGG GRGKRKAILE PLDKAALQRQ RRMIKNRESA ARSRERKQAY QVELESIAVR LEEENEQLLK EKEERTRAHY KQIIEKVIPV VEKRKPPRVL
301: RRVCSMQW

Best Arabidopsis Sequence Match ( AT5G44080.1 )
(BLAST)

001: MTSFQVMRSS NSRNSDLSRR ISSASTSSSS IRPQQQFRRD LTSVGYGGRN DGLYSSNSMT VEGILHDTFA SDPPAPTESS LLDASINLMD ASPAPMEITT
101: TTASDVVDHG GGTETTRGGK SVDEIWREMV SGEGKGMKEE TSEEIMTLED FLAKAAVEDE TAVTASAEDL DVKIPVTNYG FDHSAPPHNP FQMIDKVEGS
201: IVAFGNGLDV YGGGARGKRA RVMVEPLDKA AAQRQRRMIK NRESAARSRE RKQAYQVELE ALAAKLEEEN ELLSKEIEDK RKERYQKLME FVIPVVEKPK
301: QQPPRFLRRI RSLEW

Arabidopsis Description

Basic leucine zipper transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9FNB9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.