Factsheet for Solyc01g008980.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400058469	Potato	nucleus	96.58	96.58
VIT_06s0009g01790.t01	Wine grape	nucleus	59.59	35.08
KRG89815	Soybean	nucleus	65.07	34.67
KRH18666	Soybean	nucleus	58.9	30.94
Solyc10g081350.1.1	Tomato	nucleus	54.79	22.86
Solyc10g076920.1.1	Tomato	nucleus	36.99	19.08
Solyc04g071510.2.1	Tomato	nucleus, plastid	36.3	17.21
Solyc01g104650.2.1	Tomato	nucleus	34.93	17.17
Solyc01g009510.1.1	Tomato	nucleus	21.23	16.32
Solyc10g050210.1.1	Tomato	nucleus	36.99	13.92
Solyc01g108080.2.1	Tomato	nucleus	37.67	13.29
Solyc11g044560.1.1	Tomato	nucleus	36.3	13.28
Solyc04g078840.2.1	Tomato	nucleus	38.36	12.53
Solyc09g009490.2.1	Tomato	nucleus	35.62	12.21

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827
UniProt:K4AT94	PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF263
SMART:SM00338	SUPFAM:SSF57959	EnsemblPlantsGene:Solyc01g008980.2	EnsemblPlants:Solyc01g008980.2.1	UniParc:UPI000276332B	InterPro:bZIP
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1:+:2995054..2999268

Molecular Weight (calculated)

16690.9 Da

IEP (calculated)

9.808

GRAVY (calculated)

-0.864

Length

146 amino acids

Sequence
(BLAST)

001: MNSQERELTL GETTLEDYLV KAGLFVADAS LGHTMSLDNP TAMQNFVPPI GLSPSPSLSD TPVSDRKRGA MDIDKTIDRR LRRKIKNRES AARSRARKQA
101: YHNELVNKVS HLEEENMKLK KEKELENMLS ELSSEPRYQL RRTTSF

Best Arabidopsis Sequence Match ( AT2G41070.3 )
(BLAST)

001: MGSIRGNIEE PISQSLTRQN SLYSLKLHEV QTHLGSSGKP LGSMNLDELL KTVLPPAEEG LVRQGSLTLP RDLSKKTVDE VWRDIQQDKN GNGTSTTTTH
101: KQPTLGEITL EDLLLRAGVV TETVVPQENV VNIASNGQWV EYHHQPQQQQ GFMTYPVCEM QDMVMMGGLS DTPQAPGRKR VAGEIVEKTV ERRQKRMIKN
201: RESAARSRAR KQAYTHELEI KVSRLEEENE KLRRLKEVEK ILPSEPPPDP KWKLRRTNSA SL

Arabidopsis Description

EELBasic-leucine zipper (bZIP) transcription factor family protein [Source:TAIR;Acc:AT2G41070]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.