CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH18666	Soybean	nucleus	85.4	84.17
Solyc01g008980.2.1	Tomato	nucleus	34.67	65.07
PGSC0003DMT400058469	Potato	nucleus	34.67	65.07
VIT_06s0009g01790.t01	Wine grape	nucleus	58.76	64.92
KRH56272	Soybean	nucleus	55.11	47.78
KRH44714	Soybean	nucleus	56.2	47.68
KRH62689	Soybean	nucleus	54.74	47.47
KRH13203	Soybean	nucleus	51.46	46.69
KRG94206	Soybean	nucleus	51.46	43.93
KRH57716	Soybean	nucleus	50.37	42.33
KRG94991	Soybean	nucleus	47.81	40.94
KRH64894	Soybean	nucleus	46.72	40.51
KRH52002	Soybean	cytosol	14.23	39.8
KRH10463	Soybean	nucleus	16.79	35.38
KRH43979	Soybean	nucleus	18.98	32.5
KRH58352	Soybean	nucleus	24.45	29.91
KRH42235	Soybean	nucleus, plastid	24.82	28.45
KRG96191	Soybean	nucleus	39.42	27.91
KRH61298	Soybean	nucleus	41.97	27.58
KRH22688	Soybean	nucleus	33.21	27.08
KRH35126	Soybean	nucleus	24.09	26.72
KRH50289	Soybean	nucleus	37.96	24.53
KRH16634	Soybean	mitochondrion	26.28	24.49
KRH71134	Soybean	nucleus	38.69	24.15
KRH32737	Soybean	nucleus	37.96	23.27
KRH18840	Soybean	nucleus	21.9	22.22
KRH20056	Soybean	nucleus	38.69	21.46
KRH37750	Soybean	nucleus	16.06	20.85
KRH52003	Soybean	nucleus	23.72	19.76
KRH26009	Soybean	nucleus, plastid	10.22	15.14
KRH26633	Soybean	mitochondrion	31.75	13.51

Protein Annotations

Gene3D:1.20.5.170	EntrezGene:100807027	MapMan:15.5.4.1	EMBL:ACUP02012279	ncoils:Coil	EnsemblPlantsGene:GLYMA_20G049200
GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	UniProt:I1NE19	InterPro:IPR004827	EnsemblPlants:KRG89815	ProteinID:KRG89815
ProteinID:KRG89815.1	PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217	SMART:SM00338	SUPFAM:SSF57959
UniParc:UPI0001B37322	InterPro:bZIP	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr20:-:9648054..9659172

Molecular Weight (calculated)

30427.8 Da

IEP (calculated)

8.948

GRAVY (calculated)

-0.704

Length

274 amino acids

Sequence
(BLAST)

001: MGIQTVGSLG NGQQSHLQPS SLSRQGSWYS LTLDEVNCQL GDMGKPLGSM NLDELLQNVW TAEASKSSVV VGVESENMSS SSSSLQRQAS LTLARALSGK
101: TVDDVWREIQ QGQKKKYGED VRSQEGEMTL GETTLEDFLV QAGLFAEASI SPAVGLDAMD SLATQGFQQK TGLLSSSPSI GSLSDTRLGR KRDASDAYEK
201: TLERRLRRKI KNRESAARSR ARKQAYHNEL VGKVSRLEEE NVKLKKEKEF EERLLPDPLP ERKYQLRRHN SAFF

Best Arabidopsis Sequence Match ( AT2G41070.1 )
(BLAST)

001: MGSIRGNIEE PISQSLTRQN SLYSLKLHEV QTHLGSSGKP LGSMNLDELL KTVLPPAEEG LVRQGSLTLP RDLSKKTVDE VWRDIQQDKN GNGTSTTTTH
101: KQPTLGEITL EDLLLRAGVV TETVVPQENV VNIASNGQWV EYHHQPQQQQ GFMTYPVCEM QDMVMMGGLS DTPQAPGRKR VAGEIVEKTV ERRQKRMIKN
201: RESAARSRAR KQAYTHELEI KVSRLEEENE KLRRLKEVEK ILPSEPPPDP KWKLRRTNSA SL

Arabidopsis Description

EELBasic-leucine zipper (bZIP) transcription factor family protein [Source:TAIR;Acc:AT2G41070]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.