Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH58352 | Soybean | nucleus | 81.59 | 87.05 |
| KRH10463 | Soybean | nucleus | 29.71 | 54.62 |
| KRH43979 | Soybean | nucleus | 35.56 | 53.12 |
| GSMUA_Achr9P08900_001 | Banana | nucleus | 40.17 | 38.71 |
| GSMUA_Achr3P22470_001 | Banana | nucleus | 41.0 | 38.28 |
| VIT_12s0055g00420.t01 | Wine grape | nucleus | 47.28 | 37.79 |
| PGSC0003DMT400076576 | Potato | nucleus | 44.35 | 37.32 |
| KRH35126 | Soybean | nucleus | 38.08 | 36.84 |
| Solyc01g104650.2.1 | Tomato | nucleus | 45.61 | 36.7 |
| GSMUA_Achr2P20490_001 | Banana | nucleus | 36.4 | 35.8 |
| HORVU3Hr1G083250.2 | Barley | nucleus | 30.13 | 32.58 |
| EES03943 | Sorghum | nucleus | 35.56 | 32.44 |
| Zm00001d042721_P001 | Maize | nucleus | 35.15 | 32.31 |
| GSMUA_Achr10P... | Banana | nucleus | 35.98 | 32.21 |
| TraesCS3D01G371900.1 | Wheat | nucleus | 32.64 | 31.2 |
| TraesCS1D01G273100.1 | Wheat | nucleus | 32.64 | 30.95 |
| TraesCS1B01G282800.1 | Wheat | nucleus | 32.64 | 30.95 |
| TraesCS1A01G273000.1 | Wheat | nucleus | 32.64 | 30.83 |
| TraesCS3B01G411300.1 | Wheat | nucleus | 32.22 | 30.8 |
| TraesCS3A01G378700.1 | Wheat | nucleus | 33.05 | 30.74 |
| Zm00001d038311_P001 | Maize | nucleus | 31.38 | 29.53 |
| Os01t0867300-01 | Rice | nucleus | 32.64 | 29.32 |
| Os05t0437700-01 | Rice | plastid | 30.13 | 29.15 |
| EES18296 | Sorghum | nucleus, plastid | 32.22 | 28.84 |
| HORVU1Hr1G074960.8 | Barley | mitochondrion, nucleus, plastid | 28.45 | 27.09 |
| Zm00001d012273_P001 | Maize | plastid | 26.78 | 26.23 |
| KRG89815 | Soybean | nucleus | 28.45 | 24.82 |
| KRH13203 | Soybean | nucleus | 28.03 | 22.19 |
| KRH56272 | Soybean | nucleus | 28.87 | 21.84 |
| KRH62689 | Soybean | nucleus | 28.45 | 21.52 |
| KRG94206 | Soybean | nucleus | 28.87 | 21.5 |
| KRH44714 | Soybean | nucleus | 28.87 | 21.36 |
| KRH18666 | Soybean | nucleus | 24.69 | 21.22 |
| KRH64894 | Soybean | nucleus | 28.03 | 21.2 |
| KRG94991 | Soybean | nucleus | 28.03 | 20.94 |
| KRH57716 | Soybean | nucleus | 28.03 | 20.55 |
| KRG96191 | Soybean | nucleus | 30.96 | 19.12 |
| KRH22688 | Soybean | nucleus | 25.52 | 18.15 |
| KRH61298 | Soybean | nucleus | 29.29 | 16.79 |
| KRH52003 | Soybean | nucleus | 23.01 | 16.72 |
| KRH32737 | Soybean | nucleus | 30.96 | 16.55 |
| KRH50289 | Soybean | nucleus | 28.03 | 15.8 |
| KRH37750 | Soybean | nucleus | 13.81 | 15.64 |
| KRH20056 | Soybean | nucleus | 31.8 | 15.38 |
| KRH71134 | Soybean | nucleus | 27.2 | 14.81 |
| KRH18840 | Soybean | nucleus | 15.48 | 13.7 |
| KRH16634 | Soybean | mitochondrion | 15.9 | 12.93 |
| KRH52002 | Soybean | cytosol | 4.18 | 10.2 |
| KRH26633 | Soybean | mitochondrion | 24.27 | 9.01 |
| KRH26009 | Soybean | nucleus, plastid | 5.02 | 6.49 |
Protein Annotations
| Gene3D:1.20.5.170 | EntrezGene:100101890 | MapMan:15.5.4.1 | UniProt:A4ZGU1 | EMBL:ACUP02004791 | ncoils:Coil |
| EMBL:DQ792749 | EnsemblPlantsGene:GLYMA_08G077400 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR004827 | EnsemblPlants:KRH42235 | ProteinID:KRH42235 | ProteinID:KRH42235.1 | PFAM:PF00170 |
| ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF175 | SMART:SM00338 | SUPFAM:SSF57959 |
| UniParc:UPI00015091AF | InterPro:bZIP | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr8:-:5878345..5881483
Molecular Weight (calculated)
26188.9 Da
IEP (calculated)
8.472
GRAVY (calculated)
-0.654
Length
239 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSKVVSTN PDLPRNSSSS SSSSSTSPIS PLSSLLSDLH PMDDILKSIS PKSVDDVWND IVTGATVHDA VSATTTDNAD AAMTLEDFLT KAIREEDVRG
101: APPPPPPPPP SSFLPFPADG SSSSVEPFAN GVSAAPSNSV QKGKRRAVEE PVDKATLQKQ RRMIKNRESA ARSRERKQAY TSELEYLVHQ LEQENVQLLN
201: EEAEMRRQRK KQLFECIIPI EVMPKPKKKL RRVNSAQSL
101: APPPPPPPPP SSFLPFPADG SSSSVEPFAN GVSAAPSNSV QKGKRRAVEE PVDKATLQKQ RRMIKNRESA ARSRERKQAY TSELEYLVHQ LEQENVQLLN
201: EEAEMRRQRK KQLFECIIPI EVMPKPKKKL RRVNSAQSL
001: MASFKLMSSS NSDLSRRNSS SASSSPSIRS SHHLRPNPHA DHSRISFAYG GGVNDYTFAS DSKPFEMAID VDRSIGDRNS VNNGKSVDDV WKEIVSGEQK
101: TIMMKEEEPE DIMTLEDFLA KAEMDEGASD EIDVKIPTER LNNDGSYTFD FPMQRHSSFQ MVEGSMGGGV TRGKRGRVMM EAMDKAAAQR QKRMIKNRES
201: AARSRERKQA YQVELETLAA KLEEENEQLL KEIEESTKER YKKLMEVLIP VDEKPRPPSR PLSRSHSLEW
101: TIMMKEEEPE DIMTLEDFLA KAEMDEGASD EIDVKIPTER LNNDGSYTFD FPMQRHSSFQ MVEGSMGGGV TRGKRGRVMM EAMDKAAAQR QKRMIKNRES
201: AARSRERKQA YQVELETLAA KLEEENEQLL KEIEESTKER YKKLMEVLIP VDEKPRPPSR PLSRSHSLEW
Arabidopsis Description
GBF4G-box-binding factor 4 [Source:UniProtKB/Swiss-Prot;Acc:P42777]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.