Factsheet for Solyc01g104650.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 4
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400076576	Potato	nucleus	92.59	96.83
KRH10463	Soybean	nucleus	25.25	57.69
KRH43979	Soybean	nucleus	29.29	54.38
VIT_12s0055g00420.t01	Wine grape	nucleus	53.54	53.18
KRH42235	Soybean	nucleus, plastid	36.7	45.61
GSMUA_Achr9P08900_001	Banana	nucleus	37.37	44.76
KRH58352	Soybean	nucleus	33.67	44.64
GSMUA_Achr3P22470_001	Banana	nucleus	37.37	43.36
GSMUA_Achr2P20490_001	Banana	nucleus	35.35	43.21
HORVU3Hr1G083250.2	Barley	nucleus	31.65	42.53
TraesCS3D01G371900.1	Wheat	nucleus	35.69	42.4
Zm00001d042721_P001	Maize	nucleus	36.7	41.92
TraesCS3B01G411300.1	Wheat	nucleus	35.02	41.6
TraesCS3A01G378700.1	Wheat	nucleus	35.35	40.86
EES03943	Sorghum	nucleus	36.03	40.84
TraesCS1A01G273000.1	Wheat	nucleus	34.68	40.71
TraesCS1D01G273100.1	Wheat	nucleus	34.34	40.48
TraesCS1B01G282800.1	Wheat	nucleus	34.34	40.48
GSMUA_Achr10P...	Banana	nucleus	35.35	39.33
Os01t0867300-01	Rice	nucleus	35.02	39.1
Zm00001d038311_P001	Maize	nucleus	33.33	38.98
Solyc04g071510.2.1	Tomato	nucleus, plastid	40.4	38.96
EES18296	Sorghum	nucleus, plastid	34.68	38.58
Os05t0437700-01	Rice	plastid	31.65	38.06
HORVU1Hr1G074960.8	Barley	mitochondrion, nucleus, plastid	29.63	35.06
Solyc01g008980.2.1	Tomato	nucleus	17.17	34.93
Zm00001d012273_P001	Maize	plastid	27.95	34.02
Solyc10g081350.1.1	Tomato	nucleus	25.93	22.0
Solyc01g009510.1.1	Tomato	nucleus	13.8	21.58
Solyc11g044560.1.1	Tomato	nucleus	27.27	20.3
Solyc01g108080.2.1	Tomato	nucleus	27.27	19.57
Solyc09g009490.2.1	Tomato	nucleus	27.95	19.48
Solyc10g076920.1.1	Tomato	nucleus	18.52	19.43
Solyc10g050210.1.1	Tomato	nucleus	24.92	19.07
Solyc04g078840.2.1	Tomato	nucleus	28.62	19.02

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827
UniProt:K4B239	PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF175
SMART:SM00338	SUPFAM:SSF57959	EnsemblPlantsGene:Solyc01g104650.2	EnsemblPlants:Solyc01g104650.2.1	UniParc:UPI0002768B7A	InterPro:bZIP
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1:+:93081545..93085085

Molecular Weight (calculated)

32081.9 Da

IEP (calculated)

8.242

GRAVY (calculated)

-0.675

Length

297 amino acids

Sequence
(BLAST)

001: MASKVMPSAS TTPNSDRSLH PQNPSSSLNH SHPSRNFDSM NMDEILKNIY SDSDPFACSV SATAAVHTPS ATAAGVGDVG PTKTVDEVWR EIVAGGGGGG
101: GSREPEMTLE DFLTKAGAVT EEDVRVPVIA PPPPPPPPPA TGAPSARGFV VDNMMGTGNC QFPVAMQNGP GGYGMEPQPH MGFGNGVVAI TGSGSGSGRG
201: KRRSTVEELP ADRATQQKQR RMIKNRESAA RSRERKQAYT VELESLVTQL EEENARLLRE EEEKNKERLK QIMENLIPVV EKRRPPRVLR RVRSMSW

Best Arabidopsis Sequence Match ( AT5G44080.1 )
(BLAST)

001: MTSFQVMRSS NSRNSDLSRR ISSASTSSSS IRPQQQFRRD LTSVGYGGRN DGLYSSNSMT VEGILHDTFA SDPPAPTESS LLDASINLMD ASPAPMEITT
101: TTASDVVDHG GGTETTRGGK SVDEIWREMV SGEGKGMKEE TSEEIMTLED FLAKAAVEDE TAVTASAEDL DVKIPVTNYG FDHSAPPHNP FQMIDKVEGS
201: IVAFGNGLDV YGGGARGKRA RVMVEPLDKA AAQRQRRMIK NRESAARSRE RKQAYQVELE ALAAKLEEEN ELLSKEIEDK RKERYQKLME FVIPVVEKPK
301: QQPPRFLRRI RSLEW

Arabidopsis Description

Basic leucine zipper transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9FNB9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.