Factsheet for Os05t0437700-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
endoplasmic reticulum 1
mitochondrion 1
plastid 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G273000.1	Wheat	nucleus	70.85	69.17
TraesCS1B01G282800.1	Wheat	nucleus	70.45	69.05
TraesCS1D01G273100.1	Wheat	nucleus	70.45	69.05
HORVU1Hr1G074960.8	Barley	mitochondrion, nucleus, plastid	68.83	67.73
EES18296	Sorghum	nucleus, plastid	61.94	57.3
Zm00001d038311_P001	Maize	nucleus	58.7	57.09
Os01t0867300-01	Rice	nucleus	54.66	50.75
GSMUA_Achr9P08900_001	Banana	nucleus	40.89	40.73
GSMUA_Achr3P22470_001	Banana	nucleus	40.89	39.45
KRH10463	Soybean	nucleus	18.62	35.38
GSMUA_Achr10P...	Banana	nucleus	37.65	34.83
GSMUA_Achr2P20490_001	Banana	nucleus	33.2	33.74
VIT_12s0055g00420.t01	Wine grape	nucleus	39.27	32.44
VIT_18s0072g00470.t01	Wine grape	nucleus, plastid	36.03	32.36
KRH43979	Soybean	nucleus	20.65	31.88
Solyc01g104650.2.1	Tomato	nucleus	38.06	31.65
PGSC0003DMT400076576	Potato	nucleus	35.63	30.99
KRH58352	Soybean	nucleus	27.53	30.36
KRH42235	Soybean	nucleus, plastid	29.15	30.13
CDY54481	Canola	nucleus	34.82	30.07
CDY22311	Canola	nucleus, plastid	31.58	29.32
Bra033719.1-P	Field mustard	nucleus, plastid	31.17	28.95
Solyc04g071510.2.1	Tomato	nucleus, plastid	35.63	28.57
AT1G03970.1	Thale cress	nucleus, plastid	31.17	28.52
KRH35126	Soybean	nucleus	27.94	27.94
Bra015281.1-P	Field mustard	nucleus, plastid	29.15	26.87
CDY18197	Canola	nucleus, plastid	29.15	26.77
CDX89852	Canola	nucleus, plastid	28.74	26.49
AT5G44080.1	Thale cress	nucleus	33.2	26.03
Os03t0322700-00	Rice	nucleus	24.7	25.0
Os07t0686100-01	Rice	nucleus	26.72	24.09
Os06t0211200-01	Rice	nucleus	27.94	21.3
Os01t0813100-00	Rice	nucleus	29.15	20.81
Os05t0489700-01	Rice	nucleus	26.72	19.7
Os01t0859300-01	Rice	nucleus	25.1	19.2
Os02t0766700-01	Rice	nucleus	25.91	17.93
Os08t0472000-01	Rice	nucleus	22.67	17.61
Os09t0456200-01	Rice	nucleus	26.72	17.55

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	ProteinID:AAT07607.1	ProteinID:AAV59310.1	ProteinID:BAS94215.1	ncoils:Coil
GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827	EnsemblPlantsGene:Os05g0437700	EnsemblPlants:Os05t0437700-01	PFAM:PF00170
ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF175	UniProt:Q75HX9	SMART:SM00338
SUPFAM:SSF57959	UniParc:UPI000035DFF8	InterPro:bZIP	SEG:seg	:	:

Description

b-ZIP TRANSCRIPTION FACTOR 40Similar to G-box-binding factor 4. (Os05t0437700-01)

Coordinates

chr5:+:21432457..21435612

Molecular Weight (calculated)

25160.6 Da

IEP (calculated)

6.094

GRAVY (calculated)

-0.467

Length

247 amino acids

Sequence
(BLAST)

001: MASSRVMAAA AASSSSSPPP PPPAAAAAGG AADLARFRST SSGIGSMNMD DILRNIYGEA APPPGAAGSA PAPPPAGEAA GAPVAEVAAR RTAEEVWKEI
101: SSSGGLSAPA PAPAAGAAGR GGGPEMTLED FLAREDDPRA TAVEGNMVVG FPNVTEGVGT AGGGRGGGGG GRGRKRTLMD PADRAAMQRQ KRMIKNRESA
201: ARSRERKQAY IAELEAQVAE LEEEHAQLLR EQEEKNQKRL KEVSLIV

Best Arabidopsis Sequence Match ( AT1G03970.1 )
(BLAST)

001: MASFKLMSSS NSDLSRRNSS SASSSPSIRS SHHLRPNPHA DHSRISFAYG GGVNDYTFAS DSKPFEMAID VDRSIGDRNS VNNGKSVDDV WKEIVSGEQK
101: TIMMKEEEPE DIMTLEDFLA KAEMDEGASD EIDVKIPTER LNNDGSYTFD FPMQRHSSFQ MVEGSMGGGV TRGKRGRVMM EAMDKAAAQR QKRMIKNRES
201: AARSRERKQA YQVELETLAA KLEEENEQLL KEIEESTKER YKKLMEVLIP VDEKPRPPSR PLSRSHSLEW

Arabidopsis Description

GBF4G-box-binding factor 4 [Source:UniProtKB/Swiss-Prot;Acc:P42777]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.