Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
- plastid 2
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr10P... | Banana | nucleus | 71.88 | 68.91 |
HORVU3Hr1G083250.2 | Barley | nucleus | 44.92 | 52.04 |
GSMUA_Achr9P08900_001 | Banana | nucleus | 50.0 | 51.61 |
Zm00001d042721_P001 | Maize | nucleus | 52.34 | 51.54 |
EES03943 | Sorghum | nucleus | 51.95 | 50.76 |
TraesCS3B01G411300.1 | Wheat | nucleus | 49.22 | 50.4 |
TraesCS3D01G371900.1 | Wheat | nucleus | 49.22 | 50.4 |
TraesCS3A01G378700.1 | Wheat | nucleus | 50.0 | 49.81 |
GSMUA_Achr2P20490_001 | Banana | nucleus | 46.48 | 48.97 |
Os01t0867300-01 | Rice | nucleus | 49.22 | 47.37 |
KRH10463 | Soybean | nucleus | 23.83 | 46.92 |
TraesCS1B01G282800.1 | Wheat | nucleus | 45.31 | 46.03 |
TraesCS1D01G273100.1 | Wheat | nucleus | 45.31 | 46.03 |
TraesCS1A01G273000.1 | Wheat | nucleus | 45.31 | 45.85 |
KRH43979 | Soybean | nucleus | 28.52 | 45.62 |
Zm00001d038311_P001 | Maize | nucleus | 44.53 | 44.88 |
EES18296 | Sorghum | nucleus, plastid | 46.48 | 44.57 |
Zm00001d012273_P001 | Maize | plastid | 41.41 | 43.44 |
VIT_18s0072g00470.t01 | Wine grape | nucleus, plastid | 46.48 | 43.27 |
VIT_12s0055g00420.t01 | Wine grape | nucleus | 48.83 | 41.81 |
KRH58352 | Soybean | nucleus | 36.33 | 41.52 |
KRH42235 | Soybean | nucleus, plastid | 38.28 | 41.0 |
Os05t0437700-01 | Rice | plastid | 39.45 | 40.89 |
HORVU1Hr1G074960.8 | Barley | mitochondrion, nucleus, plastid | 39.45 | 40.24 |
PGSC0003DMT400076576 | Potato | nucleus | 42.19 | 38.03 |
KRH35126 | Soybean | nucleus | 36.33 | 37.65 |
Solyc01g104650.2.1 | Tomato | nucleus | 43.36 | 37.37 |
Solyc04g071510.2.1 | Tomato | nucleus, plastid | 44.53 | 37.01 |
AT1G03970.1 | Thale cress | nucleus, plastid | 38.67 | 36.67 |
CDY22311 | Canola | nucleus, plastid | 37.89 | 36.47 |
Bra033719.1-P | Field mustard | nucleus, plastid | 37.11 | 35.71 |
CDY54481 | Canola | nucleus | 39.84 | 35.66 |
Bra015281.1-P | Field mustard | nucleus, plastid | 36.72 | 35.07 |
CDX89852 | Canola | nucleus, plastid | 36.72 | 35.07 |
CDY18197 | Canola | nucleus, plastid | 36.72 | 34.94 |
AT5G44080.1 | Thale cress | nucleus | 39.45 | 32.06 |
GSMUA_Achr8P21560_001 | Banana | nucleus | 28.91 | 31.09 |
GSMUA_Achr11P... | Banana | nucleus | 28.52 | 30.04 |
GSMUA_Achr2P07520_001 | Banana | nucleus | 25.0 | 29.36 |
GSMUA_AchrUn_... | Banana | nucleus | 30.86 | 28.83 |
GSMUA_Achr6P15970_001 | Banana | nucleus | 21.48 | 28.35 |
GSMUA_Achr10P... | Banana | nucleus | 25.78 | 28.21 |
GSMUA_Achr10P... | Banana | mitochondrion, nucleus | 20.7 | 26.24 |
GSMUA_Achr8P07740_001 | Banana | nucleus | 31.25 | 23.05 |
GSMUA_Achr3P22710_001 | Banana | nucleus | 30.86 | 22.51 |
GSMUA_Achr5P24570_001 | Banana | nucleus | 32.42 | 21.39 |
GSMUA_Achr6P30550_001 | Banana | nucleus | 32.03 | 20.6 |
GSMUA_Achr5P05690_001 | Banana | nucleus | 32.42 | 20.39 |
GSMUA_Achr9P27130_001 | Banana | nucleus | 30.86 | 19.6 |
GSMUA_Achr6P04270_001 | Banana | nucleus | 29.3 | 19.58 |
GSMUA_Achr3P07000_001 | Banana | nucleus | 30.08 | 19.11 |
Protein Annotations
Gene3D:1.20.5.170 | MapMan:15.5.4.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 |
GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr3G22470_001 |
EnsemblPlants:GSMUA_Achr3P22470_001 | EnsemblPlants:GSMUA_Achr3T22470_001 | InterPro:IPR004827 | UniProt:M0SGW3 | PFAM:PF00170 | ScanProsite:PS00036 |
PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF175 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI0002964546 |
InterPro:bZIP | SEG:seg | : | : | : | : |
Description
Putative G-box-binding factor 4 [Source:GMGC_GENE;Acc:GSMUA_Achr3G22470_001]
Coordinates
chr3:+:23449921..23454405
Molecular Weight (calculated)
27438.6 Da
IEP (calculated)
8.648
GRAVY (calculated)
-0.495
Length
256 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSRVMASS SSANSDLTRQ SSICSLPVTD LQSSISGGGE LTKNLGSMSM DDLFRNICGD NPVAFAGGAE GGVSVSRQGS FAFPKSVGEK SVDEVWREIT
101: AGRKADGGDG PGSEMTLEDF LARAGAVGED DVGVPSGSSQ NPALGLGNGA EGVGKVGRGK KRSVLDPVDR AALQRQKRMI KNRESAARSR ERKQAYIAEL
201: ESLVAQLEEE NAQLLRSQEQ QQKMRVKQLL ENIVPVTEMK KPRRILRRTC SMECLF
101: AGRKADGGDG PGSEMTLEDF LARAGAVGED DVGVPSGSSQ NPALGLGNGA EGVGKVGRGK KRSVLDPVDR AALQRQKRMI KNRESAARSR ERKQAYIAEL
201: ESLVAQLEEE NAQLLRSQEQ QQKMRVKQLL ENIVPVTEMK KPRRILRRTC SMECLF
001: MASFKLMSSS NSDLSRRNSS SASSSPSIRS SHHLRPNPHA DHSRISFAYG GGVNDYTFAS DSKPFEMAID VDRSIGDRNS VNNGKSVDDV WKEIVSGEQK
101: TIMMKEEEPE DIMTLEDFLA KAEMDEGASD EIDVKIPTER LNNDGSYTFD FPMQRHSSFQ MVEGSMGGGV TRGKRGRVMM EAMDKAAAQR QKRMIKNRES
201: AARSRERKQA YQVELETLAA KLEEENEQLL KEIEESTKER YKKLMEVLIP VDEKPRPPSR PLSRSHSLEW
101: TIMMKEEEPE DIMTLEDFLA KAEMDEGASD EIDVKIPTER LNNDGSYTFD FPMQRHSSFQ MVEGSMGGGV TRGKRGRVMM EAMDKAAAQR QKRMIKNRES
201: AARSRERKQA YQVELETLAA KLEEENEQLL KEIEESTKER YKKLMEVLIP VDEKPRPPSR PLSRSHSLEW
Arabidopsis Description
GBF4G-box-binding factor 4 [Source:UniProtKB/Swiss-Prot;Acc:P42777]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.