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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
  • plastid 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr10P... Banana nucleus 71.88 68.91
HORVU3Hr1G083250.2 Barley nucleus 44.92 52.04
GSMUA_Achr9P08900_001 Banana nucleus 50.0 51.61
Zm00001d042721_P001 Maize nucleus 52.34 51.54
EES03943 Sorghum nucleus 51.95 50.76
TraesCS3B01G411300.1 Wheat nucleus 49.22 50.4
TraesCS3D01G371900.1 Wheat nucleus 49.22 50.4
TraesCS3A01G378700.1 Wheat nucleus 50.0 49.81
GSMUA_Achr2P20490_001 Banana nucleus 46.48 48.97
Os01t0867300-01 Rice nucleus 49.22 47.37
KRH10463 Soybean nucleus 23.83 46.92
TraesCS1B01G282800.1 Wheat nucleus 45.31 46.03
TraesCS1D01G273100.1 Wheat nucleus 45.31 46.03
TraesCS1A01G273000.1 Wheat nucleus 45.31 45.85
KRH43979 Soybean nucleus 28.52 45.62
Zm00001d038311_P001 Maize nucleus 44.53 44.88
EES18296 Sorghum nucleus, plastid 46.48 44.57
Zm00001d012273_P001 Maize plastid 41.41 43.44
VIT_18s0072g00470.t01 Wine grape nucleus, plastid 46.48 43.27
VIT_12s0055g00420.t01 Wine grape nucleus 48.83 41.81
KRH58352 Soybean nucleus 36.33 41.52
KRH42235 Soybean nucleus, plastid 38.28 41.0
Os05t0437700-01 Rice plastid 39.45 40.89
HORVU1Hr1G074960.8 Barley mitochondrion, nucleus, plastid 39.45 40.24
PGSC0003DMT400076576 Potato nucleus 42.19 38.03
KRH35126 Soybean nucleus 36.33 37.65
Solyc01g104650.2.1 Tomato nucleus 43.36 37.37
Solyc04g071510.2.1 Tomato nucleus, plastid 44.53 37.01
AT1G03970.1 Thale cress nucleus, plastid 38.67 36.67
CDY22311 Canola nucleus, plastid 37.89 36.47
Bra033719.1-P Field mustard nucleus, plastid 37.11 35.71
CDY54481 Canola nucleus 39.84 35.66
Bra015281.1-P Field mustard nucleus, plastid 36.72 35.07
CDX89852 Canola nucleus, plastid 36.72 35.07
CDY18197 Canola nucleus, plastid 36.72 34.94
AT5G44080.1 Thale cress nucleus 39.45 32.06
GSMUA_Achr8P21560_001 Banana nucleus 28.91 31.09
GSMUA_Achr11P... Banana nucleus 28.52 30.04
GSMUA_Achr2P07520_001 Banana nucleus 25.0 29.36
GSMUA_AchrUn_... Banana nucleus 30.86 28.83
GSMUA_Achr6P15970_001 Banana nucleus 21.48 28.35
GSMUA_Achr10P... Banana nucleus 25.78 28.21
GSMUA_Achr10P... Banana mitochondrion, nucleus 20.7 26.24
GSMUA_Achr8P07740_001 Banana nucleus 31.25 23.05
GSMUA_Achr3P22710_001 Banana nucleus 30.86 22.51
GSMUA_Achr5P24570_001 Banana nucleus 32.42 21.39
GSMUA_Achr6P30550_001 Banana nucleus 32.03 20.6
GSMUA_Achr5P05690_001 Banana nucleus 32.42 20.39
GSMUA_Achr9P27130_001 Banana nucleus 30.86 19.6
GSMUA_Achr6P04270_001 Banana nucleus 29.3 19.58
GSMUA_Achr3P07000_001 Banana nucleus 30.08 19.11
Protein Annotations
Gene3D:1.20.5.170MapMan:15.5.4.1ncoils:CoilGO:GO:0003674GO:GO:0003700GO:GO:0006139
GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987EnsemblPlantsGene:GSMUA_Achr3G22470_001
EnsemblPlants:GSMUA_Achr3P22470_001EnsemblPlants:GSMUA_Achr3T22470_001InterPro:IPR004827UniProt:M0SGW3PFAM:PF00170ScanProsite:PS00036
PFscan:PS50217PANTHER:PTHR22952PANTHER:PTHR22952:SF175SMART:SM00338SUPFAM:SSF57959UniParc:UPI0002964546
InterPro:bZIPSEG:seg::::
Description
Putative G-box-binding factor 4 [Source:GMGC_GENE;Acc:GSMUA_Achr3G22470_001]
Coordinates
chr3:+:23449921..23454405
Molecular Weight (calculated)
27438.6 Da
IEP (calculated)
8.648
GRAVY (calculated)
-0.495
Length
256 amino acids
Sequence
(BLAST)
001: MASSRVMASS SSANSDLTRQ SSICSLPVTD LQSSISGGGE LTKNLGSMSM DDLFRNICGD NPVAFAGGAE GGVSVSRQGS FAFPKSVGEK SVDEVWREIT
101: AGRKADGGDG PGSEMTLEDF LARAGAVGED DVGVPSGSSQ NPALGLGNGA EGVGKVGRGK KRSVLDPVDR AALQRQKRMI KNRESAARSR ERKQAYIAEL
201: ESLVAQLEEE NAQLLRSQEQ QQKMRVKQLL ENIVPVTEMK KPRRILRRTC SMECLF
Best Arabidopsis Sequence Match ( AT1G03970.1 )
(BLAST)
001: MASFKLMSSS NSDLSRRNSS SASSSPSIRS SHHLRPNPHA DHSRISFAYG GGVNDYTFAS DSKPFEMAID VDRSIGDRNS VNNGKSVDDV WKEIVSGEQK
101: TIMMKEEEPE DIMTLEDFLA KAEMDEGASD EIDVKIPTER LNNDGSYTFD FPMQRHSSFQ MVEGSMGGGV TRGKRGRVMM EAMDKAAAQR QKRMIKNRES
201: AARSRERKQA YQVELETLAA KLEEENEQLL KEIEESTKER YKKLMEVLIP VDEKPRPPSR PLSRSHSLEW
Arabidopsis Description
GBF4G-box-binding factor 4 [Source:UniProtKB/Swiss-Prot;Acc:P42777]
SUBAcon: [plastid,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.