Factsheet for GSMUA_Achr6P04270_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P24570_001	Banana	nucleus	64.49	63.66
GSMUA_Achr6P30550_001	Banana	nucleus	65.8	63.32
CDY65560	Canola	nucleus	44.39	56.29
GSMUA_Achr9P27130_001	Banana	nucleus	56.92	54.09
KRH52002	Soybean	cytosol	13.58	53.06
GSMUA_Achr5P05690_001	Banana	nucleus	54.57	51.35
CDY17109	Canola	nucleus	44.91	51.34
CDY28083	Canola	nucleus	30.81	49.79
Bra040260.1-P	Field mustard	nucleus	47.0	49.45
Os06t0211200-01	Rice	nucleus	41.78	49.38
Os08t0472000-01	Rice	nucleus	40.99	49.37
CDY18575	Canola	nucleus	44.65	48.58
EES07580	Sorghum	nucleus	43.6	48.27
KRH61298	Soybean	nucleus	52.22	47.96
Os02t0766700-01	Rice	nucleus	44.65	47.9
CDX99242	Canola	nucleus	44.13	47.74
Bra022409.1-P	Field mustard	nucleus	44.13	47.74
OQU80633	Sorghum	nucleus	47.52	47.64
CDX92320	Canola	nucleus	44.13	47.61
Zm00001d044940_P002	Maize	nucleus	43.6	47.58
CDY68227	Canola	nucleus	43.34	47.56
OQU78764	Sorghum	nucleus	38.64	47.44
CDX69020	Canola	nucleus	43.34	47.43
Zm00001d037170_P001	Maize	nucleus	41.78	47.34
EER96850	Sorghum	nucleus	45.17	47.27
Zm00001d018178_P001	Maize	nucleus	43.08	47.01
CDY51041	Canola	nucleus	40.21	46.67
GSMUA_Achr3P07000_001	Banana	nucleus	49.09	46.65
HORVU7Hr1G035500.2	Barley	nucleus	40.47	46.55
Bra001742.1-P	Field mustard	nucleus	43.08	46.48
CDY63041	Canola	nucleus	42.82	46.33
KXG19586	Sorghum	nucleus	42.04	46.26
TraesCS6A01G333600.2	Wheat	nucleus	42.04	46.0
VIT_03s0063g00310.t01	Wine grape	nucleus	49.09	45.97
HORVU6Hr1G080670.1	Barley	nucleus	42.82	45.94
TraesCS5A01G237200.2	Wheat	nucleus	44.13	45.92
CDX82302	Canola	nucleus	43.6	45.88
Bra037533.1-P	Field mustard	nucleus	46.21	45.62
TraesCS7B01G075600.1	Wheat	nucleus	40.47	45.59
VIT_18s0001g10450.t01	Wine grape	nucleus	53.0	45.41
TraesCS6B01G364000.1	Wheat	nucleus	41.51	45.3
Os09t0456200-01	Rice	nucleus	44.39	45.21
TraesCS5D01G244500.1	Wheat	nucleus	43.08	45.08
CDY58256	Canola	nucleus	45.95	45.01
TraesCS7D01G171300.1	Wheat	nucleus	40.47	44.93
TraesCS7A01G170600.1	Wheat	nucleus	40.21	44.9
TraesCS5B01G235600.2	Wheat	nucleus	42.82	44.81
TraesCS6D01G312800.1	Wheat	nucleus	42.04	44.72
Solyc04g078840.2.1	Tomato	nucleus	51.96	44.52
HORVU5Hr1G068230.1	Barley	nucleus	42.56	44.41
KRH50289	Soybean	nucleus	48.83	44.1
PGSC0003DMT400020670	Potato	nucleus	51.17	43.27
PGSC0003DMT400059040	Potato	nucleus	41.25	43.17
Bra018800.1-P	Field mustard	nucleus	41.25	42.93
AT1G45249.6	Thale cress	nucleus	48.3	42.92
KRH71134	Soybean	nucleus	49.09	42.82
Solyc01g108080.2.1	Tomato	nucleus	46.21	42.75
KRH52003	Soybean	nucleus	35.77	41.64
PGSC0003DMT400066603	Potato	nucleus	44.65	41.3
KXG26981	Sorghum	nucleus	17.75	41.21
CDX72445	Canola	nucleus	43.86	40.98
AT3G19290.3	Thale cress	nucleus	46.21	40.97
Zm00001d031790_P002	Maize	nucleus	37.6	40.34
Solyc10g050210.1.1	Tomato	nucleus	40.73	40.21
PGSC0003DMT400015892	Potato	nucleus	43.34	40.1
Solyc11g044560.1.1	Tomato	nucleus	41.51	39.85
GSMUA_Achr8P21560_001	Banana	nucleus	24.54	39.5
Zm00001d050018_P007	Maize	nucleus	40.21	39.39
Zm00001d020711_P001	Maize	nucleus	41.51	39.26
AT1G49720.2	Thale cress	nucleus	41.25	39.21
GSMUA_AchrUn_...	Banana	nucleus	27.42	38.32
GSMUA_Achr10P...	Banana	mitochondrion, nucleus	19.84	37.62
Bra011485.1-P	Field mustard	nucleus	43.08	37.59
GSMUA_Achr11P...	Banana	nucleus	23.76	37.45
AT4G34000.2	Thale cress	nucleus	44.39	37.44
GSMUA_Achr6P15970_001	Banana	nucleus	18.8	37.11
GSMUA_Achr3P22710_001	Banana	nucleus	32.9	35.9
GSMUA_Achr8P07740_001	Banana	nucleus	32.38	35.73
GSMUA_Achr2P20490_001	Banana	nucleus	21.93	34.57
Zm00001d005884_P002	Maize	nucleus	26.89	33.77
GSMUA_Achr10P...	Banana	nucleus	20.37	33.33
GSMUA_Achr2P07520_001	Banana	nucleus	18.02	31.65
GSMUA_Achr9P08900_001	Banana	nucleus	19.32	29.84
AT5G42910.1	Thale cress	nucleus	28.72	29.73
GSMUA_Achr3P22470_001	Banana	nucleus	19.58	29.3
Bra017621.1-P	Field mustard	cytosol	22.72	29.19
CDX71528	Canola	nucleus	29.77	29.16
CDY22378	Canola	nucleus	29.77	28.86
Bra033649.1-P	Field mustard	nucleus	29.77	27.54
GSMUA_Achr10P...	Banana	nucleus	18.54	26.59

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr6G04270_001
EnsemblPlants:GSMUA_Achr6P04270_001	EnsemblPlants:GSMUA_Achr6T04270_001	InterPro:IPR004827	UniProt:M0T425	PFAM:PF00170	ScanProsite:PS00036
PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF368	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI000296D2FC
InterPro:bZIP	SEG:seg	:	:	:	:

Description

Putative ABSCISIC ACID-INSENSITIVE 5-like protein 3 [Source:GMGC_GENE;Acc:GSMUA_Achr6G04270_001]

Coordinates

chr6:-:2912800..2915687

Molecular Weight (calculated)

41597.6 Da

IEP (calculated)

8.423

GRAVY (calculated)

-0.504

Length

383 amino acids

Sequence
(BLAST)

001: MNLENFGGGR GADREAPPLA RQGSIYSLTF DELQTTLGGL GKDFGSMNMD ELLKNVWTAE ETYAMTAAFG EGRGGTAAGP GLQQQGLLTL PRTLSQKTVD
101: EVWRDLAGGP TASYVQGIAG GGADVPQQTS LGEITLEEFL VKAGVVREDS TPSPALPRSA GNRSSSTNVL FDDMPTINNA TGLALGFEHR SNTNTINACI
201: PRSSAADLGM MVTVARPYAA PIPVRSRGLV SFDDAEMTDG LMTGIIGPDR ARVVVVTGSP GNHLSPDILE KANRDLSSVP KVPYMFSGGM RGRKRSGSVE
301: KVIERRQRRM IKNRESAARS RARKQAYTME LEAEVEKLKE QNQELQEKQA EMMEMQKNQD LQMISQLHGT KKHLLRRTQT GPW

Best Arabidopsis Sequence Match ( AT1G45249.1 )
(BLAST)

001: MDGSMNLGNE PPGDGGGGGG LTRQGSIYSL TFDEFQSSVG KDFGSMNMDE LLKNIWSAEE TQAMASGVVP VLGGGQEGLQ LQRQGSLTLP RTLSQKTVDQ
101: VWKDLSKVGS SGVGGSNLSQ VAQAQSQSQS QRQQTLGEVT LEEFLVRAGV VREEAQVAAR AQIAENNKGG YFGNDANTGF SVEFQQPSPR VVAAGVMGNL
201: GAETANSLQV QGSSLPLNVN GARTTYQQSQ QQQPIMPKQP GFGYGTQMGQ LNSPGIRGGG LVGLGDQSLT NNVGFVQGAS AAIPGALGVG AVSPVTPLSS
301: EGIGKSNGDS SSLSPSPYMF NGGVRGRKSG TVEKVVERRQ RRMIKNRESA ARSRARKQAY TVELEAEVAK LKEENDELQR KQARIMEMQK NQETEMRNLL
401: QGGPKKKLRR TESGPW

Arabidopsis Description

ABF2abscisic acid responsive elements-binding factor 2 [Source:TAIR;Acc:AT1G45249]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.