Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU80633 | Sorghum | nucleus | 96.47 | 78.8 |
| Zm00001d031790_P002 | Maize | nucleus | 83.33 | 72.83 |
| Os08t0472000-01 | Rice | nucleus | 68.27 | 66.98 |
| KXG26981 | Sorghum | nucleus | 34.94 | 66.06 |
| Zm00001d050018_P007 | Maize | nucleus | 81.41 | 64.96 |
| EER96850 | Sorghum | nucleus | 62.82 | 53.55 |
| KRH52002 | Soybean | cytosol | 14.74 | 46.94 |
| CDY65560 | Canola | nucleus | 44.87 | 46.36 |
| CDY17109 | Canola | nucleus | 45.51 | 42.39 |
| CDY28083 | Canola | nucleus | 32.05 | 42.19 |
| EES07580 | Sorghum | nucleus | 45.51 | 41.04 |
| GSMUA_Achr6P30550_001 | Banana | nucleus | 51.6 | 40.45 |
| KXG19586 | Sorghum | nucleus | 44.23 | 39.66 |
| GSMUA_Achr5P24570_001 | Banana | nucleus | 49.04 | 39.43 |
| Bra040260.1-P | Field mustard | nucleus | 45.83 | 39.29 |
| CDX99242 | Canola | nucleus | 44.23 | 38.98 |
| Bra022409.1-P | Field mustard | nucleus | 44.23 | 38.98 |
| CDX92320 | Canola | nucleus | 44.23 | 38.87 |
| GSMUA_Achr5P05690_001 | Banana | nucleus | 50.64 | 38.82 |
| GSMUA_Achr6P04270_001 | Banana | nucleus | 47.44 | 38.64 |
| CDY68227 | Canola | nucleus | 42.95 | 38.4 |
| CDX69020 | Canola | nucleus | 42.63 | 38.0 |
| CDY18575 | Canola | nucleus | 42.63 | 37.78 |
| KRH61298 | Soybean | nucleus | 50.0 | 37.41 |
| VIT_03s0063g00310.t01 | Wine grape | nucleus | 49.04 | 37.41 |
| GSMUA_Achr9P27130_001 | Banana | nucleus | 48.08 | 37.22 |
| Bra001742.1-P | Field mustard | nucleus | 42.31 | 37.18 |
| CDX82302 | Canola | nucleus | 42.63 | 36.54 |
| CDY63041 | Canola | nucleus | 41.35 | 36.44 |
| CDY51041 | Canola | nucleus | 38.46 | 36.36 |
| VIT_18s0001g10450.t01 | Wine grape | nucleus | 51.92 | 36.24 |
| PGSC0003DMT400059040 | Potato | nucleus | 42.31 | 36.07 |
| Solyc01g108080.2.1 | Tomato | nucleus | 47.44 | 35.75 |
| GSMUA_Achr3P07000_001 | Banana | nucleus | 45.83 | 35.48 |
| PGSC0003DMT400066603 | Potato | nucleus | 46.15 | 34.78 |
| Solyc04g078840.2.1 | Tomato | nucleus | 49.68 | 34.68 |
| AT1G45249.6 | Thale cress | nucleus | 47.44 | 34.34 |
| Bra037533.1-P | Field mustard | nucleus | 42.63 | 34.28 |
| PGSC0003DMT400015892 | Potato | nucleus | 45.19 | 34.06 |
| Bra018800.1-P | Field mustard | nucleus | 40.06 | 33.97 |
| KRH50289 | Soybean | nucleus | 46.15 | 33.96 |
| PGSC0003DMT400020670 | Potato | nucleus | 49.04 | 33.77 |
| Solyc10g050210.1.1 | Tomato | nucleus | 41.99 | 33.76 |
| CDY58256 | Canola | nucleus | 42.31 | 33.76 |
| CDX72445 | Canola | nucleus | 43.91 | 33.41 |
| AT3G19290.3 | Thale cress | nucleus | 45.83 | 33.1 |
| Solyc11g044560.1.1 | Tomato | nucleus | 41.99 | 32.83 |
| KRH71134 | Soybean | nucleus | 45.51 | 32.35 |
| AT1G49720.2 | Thale cress | nucleus | 41.35 | 32.01 |
| Bra011485.1-P | Field mustard | nucleus | 44.87 | 31.89 |
| EES18419 | Sorghum | nucleus | 32.37 | 31.17 |
| AT4G34000.2 | Thale cress | nucleus | 44.87 | 30.84 |
| KRH52003 | Soybean | nucleus | 32.05 | 30.4 |
| KXG39483 | Sorghum | nucleus | 23.72 | 30.33 |
| CDY22378 | Canola | nucleus | 36.86 | 29.11 |
| CDX71528 | Canola | nucleus | 36.22 | 28.9 |
| EES03785 | Sorghum | nucleus | 30.77 | 28.83 |
| KXG33733 | Sorghum | nucleus | 37.18 | 28.22 |
| AT5G42910.1 | Thale cress | nucleus | 33.01 | 27.84 |
| Bra033649.1-P | Field mustard | nucleus | 36.86 | 27.78 |
| OQU90534 | Sorghum | nucleus | 28.21 | 27.67 |
| Bra017621.1-P | Field mustard | cytosol | 26.28 | 27.52 |
| EES03943 | Sorghum | nucleus | 21.47 | 25.57 |
| EES18296 | Sorghum | nucleus, plastid | 20.51 | 23.97 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | UniProt:A0A1Z5R4Q7 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR004827 | EnsemblPlants:OQU78764 | ProteinID:OQU78764 | ProteinID:OQU78764.1 | PFAM:PF00170 | ScanProsite:PS00036 |
| PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF190 | SMART:SM00338 | EnsemblPlantsGene:SORBI_3008G043900 | SUPFAM:SSF57959 |
| UniParc:UPI000B8BA7CC | InterPro:bZIP | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr8:-:4302105..4303317
Molecular Weight (calculated)
32072.0 Da
IEP (calculated)
7.059
GRAVY (calculated)
-0.328
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPKDGERRG AARPGPGPLS RQGTRSVGWG GGLGKDFGSM NMDELLRSIW TAEESQAIAS ASASAAGAGP VGDGGAALQR QGSLTLPRTL SVKTVDEVWR
101: DFAREGPPGP TAGGAEPQPN RQPTLGEMTL EEFLVRAGVV RDNPAAAAAA AAAAVSAQPV APRPIQAVNN GASIFLGNFG GANDAGAGAM GFAPVGIGDQ
201: AMGNGLMPGV PGMAGGAVTV VSPVDTSVAQ LDSMGKGNGD LSSPMALVPY PFEGVIRGRR SGAGVEMVVE RRQRRMIKNR ESAARSRARK QAYTMELEAE
301: VQKLKEQNEE LQ
101: DFAREGPPGP TAGGAEPQPN RQPTLGEMTL EEFLVRAGVV RDNPAAAAAA AAAAVSAQPV APRPIQAVNN GASIFLGNFG GANDAGAGAM GFAPVGIGDQ
201: AMGNGLMPGV PGMAGGAVTV VSPVDTSVAQ LDSMGKGNGD LSSPMALVPY PFEGVIRGRR SGAGVEMVVE RRQRRMIKNR ESAARSRARK QAYTMELEAE
301: VQKLKEQNEE LQ
001: MDGSMNLGNE PPGDGGGGGG LTRQGSIYSL TFDEFQSSVG KDFGSMNMDE LLKNIWSAEE TQAMASGVVP VLGGGQEGLQ LQRQGSLTLP RTLSQKTVDQ
101: VWKDLSKVGS SGVGGSNLSQ VAQAQSQSQS QRQQTLGEVT LEEFLVRAGV VREEAQVAAR AQIAENNKGG YFGNDANTGF SVEFQQPSPR VVAAGVMGNL
201: GAETANSLQV QGSSLPLNVN GARTTYQQSQ QQQPIMPKQP GFGYGTQMGQ LNSPGIRGGG LVGLGDQSLT NNVGFVQGAS AAIPGALGVG AVSPVTPLSS
301: EGIGKSNGDS SSLSPSPYMF NGGVRGRKSG TVEKVVERRQ RRMIKNRESA ARSRARKQAY TVELEAEVAK LKEENDELQR KQARIMEMQK NQETEMRNLL
401: QGGPKKKLRR TESGPW
101: VWKDLSKVGS SGVGGSNLSQ VAQAQSQSQS QRQQTLGEVT LEEFLVRAGV VREEAQVAAR AQIAENNKGG YFGNDANTGF SVEFQQPSPR VVAAGVMGNL
201: GAETANSLQV QGSSLPLNVN GARTTYQQSQ QQQPIMPKQP GFGYGTQMGQ LNSPGIRGGG LVGLGDQSLT NNVGFVQGAS AAIPGALGVG AVSPVTPLSS
301: EGIGKSNGDS SSLSPSPYMF NGGVRGRKSG TVEKVVERRQ RRMIKNRESA ARSRARKQAY TVELEAEVAK LKEENDELQR KQARIMEMQK NQETEMRNLL
401: QGGPKKKLRR TESGPW
Arabidopsis Description
ABF2abscisic acid responsive elements-binding factor 2 [Source:TAIR;Acc:AT1G45249]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.