Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69020 | Canola | nucleus | 65.86 | 85.43 |
| CDY68227 | Canola | nucleus | 65.42 | 85.1 |
| CDX72445 | Canola | nucleus | 73.35 | 81.22 |
| Bra011485.1-P | Field mustard | nucleus | 71.81 | 74.26 |
| Bra017621.1-P | Field mustard | cytosol | 47.58 | 72.48 |
| VIT_03s0063g00310.t01 | Wine grape | nucleus | 46.92 | 52.08 |
| PGSC0003DMT400059040 | Potato | nucleus | 40.31 | 50.0 |
| AT3G19290.3 | Thale cress | nucleus | 46.7 | 49.07 |
| EES07580 | Sorghum | nucleus | 36.78 | 48.27 |
| Os02t0766700-01 | Rice | nucleus | 37.67 | 47.9 |
| Os06t0211200-01 | Rice | nucleus | 34.14 | 47.84 |
| TraesCS6B01G364000.1 | Wheat | nucleus | 36.78 | 47.58 |
| TraesCS6A01G333600.2 | Wheat | nucleus | 36.56 | 47.43 |
| KRH50289 | Soybean | nucleus | 44.27 | 47.41 |
| Os08t0472000-01 | Rice | nucleus | 33.04 | 47.17 |
| HORVU7Hr1G035500.2 | Barley | nucleus | 34.58 | 47.15 |
| Zm00001d018178_P001 | Maize | nucleus | 36.34 | 47.01 |
| GSMUA_Achr9P27130_001 | Banana | nucleus | 41.63 | 46.9 |
| Solyc01g108080.2.1 | Tomato | nucleus | 42.73 | 46.86 |
| HORVU6Hr1G080670.1 | Barley | nucleus | 36.78 | 46.78 |
| TraesCS7B01G075600.1 | Wheat | nucleus | 34.8 | 46.47 |
| Zm00001d037170_P001 | Maize | nucleus | 34.58 | 46.45 |
| TraesCS6D01G312800.1 | Wheat | nucleus | 36.78 | 46.39 |
| PGSC0003DMT400066603 | Potato | nucleus | 42.07 | 46.14 |
| OQU80633 | Sorghum | nucleus | 38.55 | 45.81 |
| GSMUA_Achr6P30550_001 | Banana | nucleus | 40.09 | 45.73 |
| Zm00001d044940_P002 | Maize | nucleus | 35.24 | 45.58 |
| KRH71134 | Soybean | nucleus | 44.05 | 45.56 |
| TraesCS7D01G171300.1 | Wheat | nucleus | 34.58 | 45.51 |
| Solyc11g044560.1.1 | Tomato | nucleus | 39.87 | 45.36 |
| GSMUA_Achr5P05690_001 | Banana | nucleus | 40.53 | 45.21 |
| TraesCS7A01G170600.1 | Wheat | nucleus | 34.14 | 45.19 |
| GSMUA_Achr5P24570_001 | Banana | nucleus | 38.55 | 45.1 |
| EER96850 | Sorghum | nucleus | 36.34 | 45.08 |
| OQU78764 | Sorghum | nucleus | 30.84 | 44.87 |
| KXG19586 | Sorghum | nucleus | 34.36 | 44.83 |
| TraesCS5B01G235600.2 | Wheat | nucleus | 36.12 | 44.81 |
| HORVU5Hr1G068230.1 | Barley | nucleus | 36.12 | 44.69 |
| Solyc10g050210.1.1 | Tomato | nucleus | 38.11 | 44.59 |
| TraesCS5A01G237200.2 | Wheat | nucleus | 36.12 | 44.57 |
| TraesCS5D01G244500.1 | Wheat | nucleus | 35.9 | 44.54 |
| GSMUA_Achr6P04270_001 | Banana | nucleus | 37.44 | 44.39 |
| Os09t0456200-01 | Rice | nucleus | 36.56 | 44.15 |
| AT1G45249.6 | Thale cress | nucleus | 41.85 | 44.08 |
| PGSC0003DMT400015892 | Potato | nucleus | 40.09 | 43.96 |
| AT1G49720.2 | Thale cress | nucleus | 37.67 | 42.43 |
| Zm00001d031790_P002 | Maize | nucleus | 31.06 | 39.5 |
| Zm00001d050018_P007 | Maize | nucleus | 33.48 | 38.87 |
| KXG26981 | Sorghum | nucleus | 14.1 | 38.79 |
| GSMUA_Achr3P07000_001 | Banana | nucleus | 34.36 | 38.71 |
| AT2G41070.4 | Thale cress | nucleus | 22.91 | 38.38 |
| AT3G56850.1 | Thale cress | nucleus | 24.67 | 37.71 |
| Zm00001d020711_P001 | Maize | nucleus | 33.04 | 37.04 |
| AT3G44460.1 | Thale cress | nucleus | 25.33 | 34.74 |
| AT5G42910.1 | Thale cress | nucleus | 26.21 | 32.16 |
| Zm00001d005884_P002 | Maize | nucleus | 21.37 | 31.8 |
| AT2G36270.3 | Thale cress | nucleus | 29.07 | 29.73 |
| AT1G03970.1 | Thale cress | nucleus, plastid | 15.64 | 26.3 |
| AT5G44080.1 | Thale cress | nucleus | 16.74 | 24.13 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | EntrezGene:829547 | Symbol:ABF3 | ProteinID:AEE86307.1 | ProteinID:AEE86308.1 |
| ProteinID:AEE86309.1 | EMBL:AF093546 | EMBL:AF334210 | EMBL:AK175851 | ProteinID:ANM67065.1 | ArrayExpress:AT4G34000 |
| EnsemblPlantsGene:AT4G34000 | RefSeq:AT4G34000 | TAIR:AT4G34000 | RefSeq:AT4G34000-TAIR-G | EnsemblPlants:AT4G34000.2 | TAIR:AT4G34000.2 |
| EMBL:AY054605 | EMBL:AY081467 | Unigene:At.21769 | ProteinID:CAA17571.1 | ProteinID:CAA19882.1 | ProteinID:CAA19883.1 |
| ProteinID:CAB80117.1 | ProteinID:CAB80118.1 | ncoils:Coil | GO:GO:0000976 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009414 |
| GO:GO:0009628 | GO:GO:0009651 | GO:GO:0009719 | GO:GO:0009737 | GO:GO:0009738 | GO:GO:0009987 |
| GO:GO:0043565 | InterPro:IPR004827 | RefSeq:NP_001031785.2 | RefSeq:NP_001320130.1 | RefSeq:NP_567949.1 | RefSeq:NP_849490.2 |
| PFAM:PF00170 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF158 | UniProt:Q9M7Q3 |
| SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI000003B2EB | InterPro:bZIP | SEG:seg | : |
Description
ABF3ABSCISIC ACID-INSENSITIVE 5-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9M7Q3]
Coordinates
chr4:+:16295334..16298285
Molecular Weight (calculated)
49680.1 Da
IEP (calculated)
8.800
GRAVY (calculated)
-0.545
Length
454 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSRLNFKSF VDGVSEQQPT VGTSLPLTRQ NSVFSLTFDE FQNSWGGGIG KDFGSMNMDE LLKNIWTAEE SHSMMGNNTS YTNISNGNSG NTVINGGGNN
101: IGGLAVGVGG ESGGFFTGGS LQRQGSLTLP RTISQKRVDD VWKELMKEDD IGNGVVNGGT SGIPQRQQTL GEMTLEEFLV RAGVVREEPQ PVESVTNFNG
201: GFYGFGSNGG LGTASNGFVA NQPQDLSGNG VAVRQDLLTA QTQPLQMQQP QMVQQPQMVQ QPQQLIQTQE RPFPKQTTIA FSNTVDVVNR SQPATQCQEV
301: KPSILGIHNH PMNNNLLQAV DFKTGVTVAA VSPGSQMSPD LTPKSALDAS LSPVPYMFGR VRKTGAVLEK VIERRQKRMI KNRESAARSR ARKQAYTMEL
401: EAEIAQLKEL NEELQKKQVE IMEKQKNQLL EPLRQPWGMG CKRQCLRRTL TGPW
101: IGGLAVGVGG ESGGFFTGGS LQRQGSLTLP RTISQKRVDD VWKELMKEDD IGNGVVNGGT SGIPQRQQTL GEMTLEEFLV RAGVVREEPQ PVESVTNFNG
201: GFYGFGSNGG LGTASNGFVA NQPQDLSGNG VAVRQDLLTA QTQPLQMQQP QMVQQPQMVQ QPQQLIQTQE RPFPKQTTIA FSNTVDVVNR SQPATQCQEV
301: KPSILGIHNH PMNNNLLQAV DFKTGVTVAA VSPGSQMSPD LTPKSALDAS LSPVPYMFGR VRKTGAVLEK VIERRQKRMI KNRESAARSR ARKQAYTMEL
401: EAEIAQLKEL NEELQKKQVE IMEKQKNQLL EPLRQPWGMG CKRQCLRRTL TGPW
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.