Factsheet for AT2G36270.3

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75056	Canola	nucleus	73.42	81.7
CDX84141	Canola	nucleus	72.3	81.47
Bra005287.1-P	Field mustard	nucleus	79.73	80.82
Bra017251.1-P	Field mustard	nucleus	71.85	80.56
CDY43738	Canola	nucleus	72.97	80.2
KRG96191	Soybean	nucleus	48.65	55.81
VIT_08s0007g03420.t01	Wine grape	nucleus	48.42	53.75
KRH32737	Soybean	nucleus	51.35	51.01
GSMUA_Achr8P07740_001	Banana	nucleus	37.16	47.55
KRH20056	Soybean	nucleus	50.68	45.55
GSMUA_Achr3P22710_001	Banana	nucleus	35.14	44.44
AT3G56850.1	Thale cress	nucleus	27.48	41.08
AT2G41070.4	Thale cress	nucleus	24.77	40.59
AT3G44460.1	Thale cress	nucleus	28.83	38.67
Os01t0859300-01	Rice	nucleus	27.93	38.39
TraesCS3B01G404600.1	Wheat	nucleus	33.33	38.24
TraesCS3D01G364900.1	Wheat	nucleus	33.56	38.21
TraesCS3A01G371800.1	Wheat	nucleus	33.56	38.11
TraesCS3B01G404200.1	Wheat	nucleus	33.33	37.95
TraesCS3B01G404300.1	Wheat	nucleus	32.43	36.83
TraesCS3B01G404400.1	Wheat	nucleus	32.43	36.83
TraesCS3A01G371900.3	Wheat	nucleus	31.08	36.13
TraesCS3A01G372000.1	Wheat	nucleus	30.86	35.77
TraesCS3B01G404500.1	Wheat	nucleus	31.31	35.55
TraesCS3D01G365500.1	Wheat	nucleus	30.41	35.25
TraesCS3A01G372200.1	Wheat	nucleus	30.18	35.08
KXG33733	Sorghum	nucleus	32.21	34.79
Zm00001d012296_P001	Maize	nucleus	32.21	34.71
TraesCS3A01G372100.2	Wheat	nucleus	30.41	34.53
TraesCS3D01G365000.1	Wheat	nucleus	30.41	34.09
HORVU3Hr1G084360.2	Barley	nucleus	32.21	33.81
AT1G45249.6	Thale cress	nucleus	32.21	33.18
Zm00001d042779_P001	Maize	nucleus	27.48	31.85
AT1G49720.2	Thale cress	nucleus	27.25	30.02
AT3G19290.3	Thale cress	nucleus	28.83	29.63
AT4G34000.2	Thale cress	nucleus	29.73	29.07
AT5G44080.1	Thale cress	nucleus	18.69	26.35
AT5G42910.1	Thale cress	nucleus	21.62	25.95
AT1G03970.1	Thale cress	nucleus, plastid	15.54	25.56

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	EntrezGene:818199	UniProt:A0A1P8B106	InterPro:ABI5	Symbol:ABI5
ProteinID:ANM62586.1	ArrayExpress:AT2G36270	EnsemblPlantsGene:AT2G36270	RefSeq:AT2G36270	TAIR:AT2G36270	RefSeq:AT2G36270-TAIR-G
EnsemblPlants:AT2G36270.3	Unigene:At.14114	ncoils:Coil	GO:GO:0003674	GO:GO:0003700	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009737	GO:GO:0009987	GO:GO:0045893
InterPro:IPR004827	RefSeq:NP_001324734.1	PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952
PANTHER:PTHR22952:SF217	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI0008483953	InterPro:bZIP	SEG:seg

Description

ABI5Basic-leucine zipper (bZIP) transcription factor family protein [Source:TAIR;Acc:AT2G36270]

Coordinates

chr2:-:15204745..15207636

Molecular Weight (calculated)

47501.2 Da

IEP (calculated)

8.848

GRAVY (calculated)

-0.766

Length

444 amino acids

Sequence
(BLAST)

001: MVTRETKLTS EREVESSMAQ ARHNGGGGGE NHPFTSLGRQ SSIYSLTLDE FQHALCENGK NFGSMNMDEF LVSIWNAEEN NNNQQQAAAA AGSHSVPANH
101: NGFNNNNNNG GEGGVGVFSG GSRGNEDANN KRGIANESSL PRQGSLTLPA PLCRKTVDEV WSEIHRGGGS GNGGDSNGRS SSSNGQNNAQ NGGETAARQP
201: TFGEMTLEDF LVKAGVVREH PTNPKPNPNP NQNQNPSSVI PAAAQQQLYG VFQGTGDPSF PGQAMGVGDP SGYAKRTGGG GYQQAPPVQA GVCYGGGVGF
301: GAGGQQMGMV GPLSPVSSDG LGHGQVDNIG GQYGVDMGGL RGRKRVVDGP VEKVVERRQR RMIKNRESAA RSRARKQAYT VELEAELNQL KEENAQLKHA
401: LAELERKRKQ QVKTPIEFAL LRWLQYFGQK KTTKWNCWFM VAVF

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.