Factsheet for Zm00001d012296_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d048085_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G44460.1	Zm00001d048085_P002	AT1G13740.1	18484180
AT3G44460.1	Zm00001d048085_P002	AT1G69260.1	18484180
AT3G44460.1	Zm00001d048085_P002	AT3G02140.1	18484180
AT3G44460.1	Zm00001d048085_P002	AT3G29575.1	18484180

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG33733	Sorghum	nucleus	85.92	86.13
Zm00001d042779_P001	Maize	nucleus	71.6	77.02
Os01t0859300-01	Rice	nucleus	52.18	66.56
TraesCS3D01G364900.1	Wheat	nucleus	59.22	62.56
TraesCS3B01G404600.1	Wheat	nucleus	58.01	61.76
TraesCS3A01G371800.1	Wheat	nucleus	58.25	61.38
TraesCS3B01G404200.1	Wheat	nucleus	57.77	61.03
TraesCS3B01G404300.1	Wheat	nucleus	57.04	60.1
TraesCS3B01G404500.1	Wheat	nucleus	56.55	59.59
TraesCS3B01G404400.1	Wheat	nucleus	56.31	59.34
TraesCS3D01G365000.1	Wheat	nucleus	53.88	56.06
TraesCS3A01G371900.3	Wheat	nucleus	51.94	56.02
TraesCS3D01G365500.1	Wheat	nucleus	51.94	55.87
TraesCS3A01G372200.1	Wheat	nucleus	51.46	55.5
HORVU3Hr1G084360.2	Barley	nucleus	56.55	55.08
TraesCS3A01G372000.1	Wheat	nucleus	50.97	54.83
TraesCS3A01G372100.2	Wheat	nucleus	50.97	53.71
Zm00001d037170_P001	Maize	nucleus	31.31	38.17
GSMUA_Achr8P07740_001	Banana	nucleus	32.04	38.04
CDX75056	Canola	nucleus	36.65	37.84
CDX84141	Canola	nucleus	36.16	37.82
GSMUA_Achr3P22710_001	Banana	nucleus	31.31	36.75
Zm00001d044940_P002	Maize	nucleus	31.31	36.75
KRG96191	Soybean	nucleus	33.74	35.92
AT3G44460.1	Thale cress	nucleus	28.64	35.65
Zm00001d018178_P001	Maize	nucleus	29.85	35.04
Bra019436.1-P	Field mustard	nucleus	28.4	34.82
Bra017251.1-P	Field mustard	nucleus	33.25	34.6
CDY10500	Canola	nucleus	28.88	34.39
VIT_06s0080g00340.t01	Wine grape	nucleus	26.94	34.26
CDY43738	Canola	nucleus	33.5	34.16
CDY08701	Canola	nucleus	28.64	34.1
Bra005287.1-P	Field mustard	nucleus	36.16	34.02
Zm00001d043117_P002	Maize	nucleus	27.43	33.93
KRH22688	Soybean	nucleus	27.67	33.93
Zm00001d042721_P001	Maize	nucleus	21.36	33.85
VIT_08s0007g03420.t01	Wine grape	nucleus	32.77	33.75
Zm00001d010638_P001	Maize	nucleus	28.16	33.72
Zm00001d022550_P001	Maize	nucleus	22.82	32.98
PGSC0003DMT400006851	Potato	nucleus	33.98	32.71
Solyc09g009490.2.1	Tomato	nucleus	33.74	32.63
AT2G36270.3	Thale cress	nucleus	34.71	32.21
Zm00001d031790_P002	Maize	nucleus	27.67	31.93
KRH32737	Soybean	nucleus	34.47	31.77
Zm00001d038311_P001	Maize	nucleus	19.42	31.5
Zm00001d050018_P007	Maize	nucleus	28.16	29.67
Zm00001d020711_P001	Maize	nucleus	29.13	29.63
Zm00001d012273_P001	Maize	plastid	17.23	29.1
KRH20056	Soybean	nucleus	34.71	28.95
Zm00001d012538_P001	Maize	nucleus	19.42	28.57
KRH37750	Soybean	nucleus	14.56	28.44
Zm00001d005884_P002	Maize	nucleus	20.87	28.2
KRH26633	Soybean	mitochondrion	26.7	17.08

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	ProteinID:AQK99305.1	UniProt:B6UI01	ncoils:Coil	EMBL:EU976866
GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827	PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217
PANTHER:PTHR22952	PANTHER:PTHR22952:SF187	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI000182FE97	EnsemblPlantsGene:Zm00001d012296
EnsemblPlants:Zm00001d012296_P001	EnsemblPlants:Zm00001d012296_T001	InterPro:bZIP	SEG:seg	:	:

Description

bZIP-transcription factor 75ABA response element binding factor%3B Putative bZIP transcription factor superfamily protein

Coordinates

chr8:-:172051538..172056127

Molecular Weight (calculated)

43449.5 Da

IEP (calculated)

6.277

GRAVY (calculated)

-0.514

Length

412 amino acids

Sequence
(BLAST)

001: MASEMSKNVK ALDEQEVTSQ HSRAQTSDAA EEQQQQQQAV DPLARQSSIM SLTLEELQNS LCEPGRNFGS MNMDEFMANI WNAEEFQAAT AGCNKEGAER
101: EPVPVATTTG TGENGGGGGS GRGLVRQGSF ALPPPLSRKT VEEVWAEISQ GPADFQASAA PQPVAQPQAA SGGGVAASGR QATLGEMTLE DFLVKAGVVR
201: GAFAGHGHGV GMVPAGPMGM QHNAAPPMMY QVAAAAAPPP GAVYPVMGDG MGYHGGGYPG GVAVVPPPPP SQCVAAAASP GSSDGMSAMT QAEMMNCIGN
301: GGVVRNGGGG ARKRDFPEDG CTEKTVERRQ RRMIKNRESA ARSRARKQAY TVELEAELNH LKEENERLRA EERTILLSKK KMLVEKMMEQ ARENVSAKKV
401: GPGLRRWGSA MW

Best Arabidopsis Sequence Match ( AT1G49720.1 )
(BLAST)

001: MGTHIDINNL GGDTSRGNES KPLARQSSLY SLTFDELQST LGEPGKDFGS MNMDELLKNI WTAEDTQAFM TTTSSVAAPG PSGFVPGGNG LQRQGSLTLP
101: RTLSQKTVDE VWKYLNSKEG SNGNTGTDAL ERQQTLGEMT LEDFLLRAGV VKEDNTQQNE NSSSGFYANN GAAGLEFGFG QPNQNSISFN GNNSSMIMNQ
201: APGLGLKVGG TMQQQQQPHQ QQLQQPHQRL PPTIFPKQAN VTFAAPVNMV NRGLFETSAD GPANSNMGGA GGTVTATSPG TSSAENNTWS SPVPYVFGRG
301: RRSNTGLEKV VERRQKRMIK NRESAARSRA RKQAYTLELE AEIESLKLVN QDLQKKQAEI MKTHNSELKE FSKQPPLLAK RQCLRRTLTG PW

Arabidopsis Description

ABF1Abscisic acid responsive element-binding factor 1 [Source:UniProtKB/TrEMBL;Acc:F4I3C9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.