Factsheet for Bra005287.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75056	Canola	nucleus	89.73	98.5
CDX84141	Canola	nucleus	87.44	97.21
Bra017251.1-P	Field mustard	nucleus	81.96	90.66
AT2G36270.3	Thale cress	nucleus	80.82	79.73
KRG96191	Soybean	nucleus	52.28	59.17
VIT_08s0007g03420.t01	Wine grape	nucleus	51.37	56.25
KRH32737	Soybean	nucleus	53.42	52.35
GSMUA_Achr8P07740_001	Banana	nucleus	39.5	49.86
KRH20056	Soybean	nucleus	54.34	48.18
GSMUA_Achr3P22710_001	Banana	nucleus	35.84	44.73
Bra007276.1-P	Field mustard	nucleus	26.71	41.49
Bra007274.1-P	Field mustard	nucleus	26.71	41.49
Bra014668.1-P	Field mustard	nucleus	21.69	41.48
Bra016953.1-P	Field mustard	nucleus	25.11	41.2
Bra004597.1-P	Field mustard	nucleus	25.57	39.86
Os01t0859300-01	Rice	nucleus	28.77	39.01
TraesCS3D01G364900.1	Wheat	nucleus	34.47	38.72
Bra040260.1-P	Field mustard	nucleus	31.96	38.46
TraesCS3B01G404600.1	Wheat	nucleus	33.79	38.24
Bra019436.1-P	Field mustard	nucleus	29.22	38.1
TraesCS3B01G404200.1	Wheat	nucleus	33.33	37.44
TraesCS3A01G371800.1	Wheat	nucleus	33.33	37.34
TraesCS3B01G404400.1	Wheat	nucleus	32.88	36.83
TraesCS3B01G404300.1	Wheat	nucleus	32.88	36.83
TraesCS3B01G404500.1	Wheat	nucleus	32.42	36.32
KXG33733	Sorghum	nucleus	34.02	36.25
Zm00001d012296_P001	Maize	nucleus	34.02	36.16
TraesCS3A01G371900.3	Wheat	nucleus	31.51	36.13
TraesCS3A01G372000.1	Wheat	nucleus	31.51	36.03
Bra022409.1-P	Field mustard	nucleus	29.0	35.88
TraesCS3D01G365500.1	Wheat	nucleus	31.05	35.51
TraesCS3A01G372200.1	Wheat	nucleus	30.59	35.08
Bra001742.1-P	Field mustard	nucleus	28.08	34.65
TraesCS3D01G365000.1	Wheat	nucleus	31.28	34.6
TraesCS3A01G372100.2	Wheat	nucleus	30.82	34.53
HORVU3Hr1G084360.2	Barley	nucleus	33.1	34.28
Bra037533.1-P	Field mustard	nucleus	29.45	33.25
Bra018800.1-P	Field mustard	nucleus	27.85	33.15
Zm00001d042779_P001	Maize	nucleus	28.31	32.38
Bra011485.1-P	Field mustard	nucleus	28.08	28.02
Bra033719.1-P	Field mustard	nucleus, plastid	16.89	27.82
Bra003253.1-P	Field mustard	plastid	24.66	26.8
Bra015281.1-P	Field mustard	nucleus, plastid	15.98	26.12
Bra033649.1-P	Field mustard	nucleus	23.74	25.12
Bra017621.1-P	Field mustard	cytosol	16.44	24.16

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	InterPro:ABI5	EnsemblPlantsGene:Bra005287	EnsemblPlants:Bra005287.1	EnsemblPlants:Bra005287.1-P
ncoils:Coil	GO:GO:0003674	GO:GO:0003700	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009719	GO:GO:0009737	GO:GO:0009987	GO:GO:0045893	InterPro:IPR004827	UniProt:M4CM50
PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF217	SMART:SM00338
SUPFAM:SSF57959	UniParc:UPI0002547C6C	InterPro:bZIP	SEG:seg	:	:

Description

AT2G36270 (E=5e-133) ABI5, GIA1 | ABI5 (ABA INSENSITIVE 5); DNA binding / transcription activator/ transcription factor

Coordinates

chrA05:+:4559599..4561161

Molecular Weight (calculated)

46226.0 Da

IEP (calculated)

9.645

GRAVY (calculated)

-0.766

Length

438 amino acids

Sequence
(BLAST)

001: MVGRETEMMS EREVETSTAQ ARQNGGAGGG GGENHPFSSL GRQSSIYSLT LDEFQHALCE NGKNFGSMNM DEFLVSIWNA EENNNNNHQA SAAASHPVPP
101: SHNGFNNNNN GGTESGVFSG GGGSSGNQGV NKKPGIAKQP SLPRQGSLTL PAPLCRKTVE EVWSEIHRGG GSGGADNSNG RSTSSSNGQN NANNGGGESA
201: ARQPTFGEMT LEDFLVKAGV VREHPTNPKP MLNPTPTSVI PASTQQQQLY GVFSGGGDPS FPVGVGDYGK RTGGGGGYQQ APPVQPGVCY GGGGGFGAGG
301: QQMGMVGPLS PVSSDGLGHG QVDNIGGQYG VVMGGLRGRK RVVDGPVEKV VERRQRRMIK NRESAARSRA RKQAYTVELE AELNQLKEEN AQLKHALGEL
401: ERKRKQQYFE SLKTRAQPKV PKVSGRLRTL MRNPSCPL

Best Arabidopsis Sequence Match ( AT2G36270.1 )
(BLAST)

001: MVTRETKLTS EREVESSMAQ ARHNGGGGGE NHPFTSLGRQ SSIYSLTLDE FQHALCENGK NFGSMNMDEF LVSIWNAEEN NNNQQQAAAA AGSHSVPANH
101: NGFNNNNNNG GEGGVGVFSG GSRGNEDANN KRGIANESSL PRQGSLTLPA PLCRKTVDEV WSEIHRGGGS GNGGDSNGRS SSSNGQNNAQ NGGETAARQP
201: TFGEMTLEDF LVKAGVVREH PTNPKPNPNP NQNQNPSSVI PAAAQQQLYG VFQGTGDPSF PGQAMGVGDP SGYAKRTGGG GYQQAPPVQA GVCYGGGVGF
301: GAGGQQMGMV GPLSPVSSDG LGHGQVDNIG GQYGVDMGGL RGRKRVVDGP VEKVVERRQR RMIKNRESAA RSRARKQAYT VELEAELNQL KEENAQLKHA
401: LAELERKRKQ QYFESLKSRA QPKLPKSNGR LRTLMRNPSC PL

Arabidopsis Description

ABI5Basic-leucine zipper (bZIP) transcription factor family protein [Source:TAIR;Acc:AT2G36270]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.