CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75056	Canola	nucleus	96.19	94.99
Bra005287.1-P	Field mustard	nucleus	97.21	87.44
CDY43738	Canola	nucleus	82.49	80.45
AT2G36270.3	Thale cress	nucleus	81.47	72.3
KRG96191	Soybean	nucleus	56.35	57.36
VIT_08s0007g03420.t01	Wine grape	nucleus	56.09	55.25
KRH32737	Soybean	nucleus	57.87	51.01
GSMUA_Achr8P07740_001	Banana	nucleus	43.4	49.28
KRH20056	Soybean	nucleus	58.38	46.56
CDX72108	Canola	nucleus	28.17	44.22
GSMUA_Achr3P22710_001	Banana	nucleus	39.34	44.16
CDY65560	Canola	nucleus	33.25	43.38
CDY51261	Canola	nucleus	27.41	43.2
CDY27189	Canola	nucleus	26.4	42.11
CDX76014	Canola	nucleus	28.17	40.96
CDX67659	Canola	nucleus	26.9	40.93
CDY28083	Canola	nucleus	24.37	40.51
CDY57581	Canola	nucleus	27.92	40.44
CDY17109	Canola	nucleus	34.01	40.0
CDY53679	Canola	nucleus	27.66	39.78
CDY06946	Canola	nucleus	27.66	39.49
CDY47381	Canola	nucleus	28.68	38.97
CDX79959	Canola	nucleus	27.66	38.65
Os01t0859300-01	Rice	nucleus	31.47	38.39
CDY10500	Canola	nucleus	32.99	37.57
TraesCS3D01G364900.1	Wheat	nucleus	37.06	37.44
CDY08701	Canola	nucleus	32.74	37.28
TraesCS3B01G404600.1	Wheat	nucleus	36.29	36.95
CDY51041	Canola	nucleus	30.71	36.67
KXG33733	Sorghum	nucleus	37.82	36.25
Zm00001d012296_P001	Maize	nucleus	37.82	36.16
TraesCS3B01G404200.1	Wheat	nucleus	35.79	36.15
TraesCS3A01G371800.1	Wheat	nucleus	35.79	36.06
TraesCS3B01G404300.1	Wheat	nucleus	35.28	35.55
TraesCS3B01G404400.1	Wheat	nucleus	35.28	35.55
TraesCS3B01G404500.1	Wheat	nucleus	34.77	35.04
CDY18575	Canola	nucleus	31.22	34.94
CDX99242	Canola	nucleus	31.22	34.75
TraesCS3D01G365500.1	Wheat	nucleus	33.76	34.73
CDX92320	Canola	nucleus	31.22	34.65
TraesCS3A01G371900.3	Wheat	nucleus	33.5	34.55
TraesCS3A01G372000.1	Wheat	nucleus	33.5	34.46
CDY63041	Canola	nucleus	30.71	34.18
CDY68227	Canola	nucleus	30.2	34.1
CDX69020	Canola	nucleus	30.2	34.0
TraesCS3A01G372200.1	Wheat	nucleus	32.74	33.77
TraesCS3D01G365000.1	Wheat	nucleus	33.25	33.08
TraesCS3A01G372100.2	Wheat	nucleus	32.74	32.99
HORVU3Hr1G084360.2	Barley	nucleus	35.28	32.86
CDX82302	Canola	nucleus	30.2	32.69
Zm00001d042779_P001	Maize	nucleus	31.22	32.11
CDY58256	Canola	nucleus	30.96	31.2
CDX72445	Canola	nucleus	30.96	29.76
CDY54481	Canola	nucleus	20.05	27.62
CDY22311	Canola	nucleus, plastid	18.27	27.07
CDY22378	Canola	nucleus	26.14	26.08
CDY18197	Canola	nucleus, plastid	17.51	25.65
CDX71528	Canola	nucleus	25.38	25.58
CDX89852	Canola	nucleus, plastid	17.26	25.37

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	GO:A0A078D455	InterPro:ABI5	EnsemblPlants:CDX84141	ProteinID:CDX84141
ProteinID:CDX84141.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003700	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009719	GO:GO:0009737	GO:GO:0009987	GO:GO:0045893	EnsemblPlantsGene:GSBRNA2T00141156001
InterPro:IPR004827	PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF217
SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI0004EECA5E	InterPro:bZIP	SEG:seg	:

Description

BnaC04g09030D

Coordinates

chrLK031836:+:149987..152671

Molecular Weight (calculated)

42394.9 Da

IEP (calculated)

9.929

GRAVY (calculated)

-0.811

Length

394 amino acids

Sequence
(BLAST)

001: MVGRETEMMS EREVETSTAQ ARQNGGAGGG ENHPFSSLGR QSSIYSLTLD EFQHALCENG KNFGSMNMDE FLVSIWNAEE NNNNNHQAAA ASHPVPPRVN
101: KKPGIGIAKQ PSLSRQGSLT LPAPLCRKTV EEVWSEIHRG GGSGGGDNNN GRSTSSSNGQ NNANNGGGES AARQPTFGEM TLEDFLVKAG VVREHPTNPK
201: PMLNPTPTSV IPASTQQQQL YGVFPGGGDP TFPMGVGDYG KRAGGGGGYQ QAPPGGQQMG MVGPLSPVSS DGLGHGQVDN IGGQYGVDMG GLRGRKRVVD
301: GPVEKVVERR QRRMIKNRES AARSRARKQA YTVELEAELN QLKEENAQLK HALGELERKR KQQYFESLKT RAQPKVPKVS GRLRTLMRNP SCPL

Best Arabidopsis Sequence Match ( AT2G36270.1 )
(BLAST)

001: MVTRETKLTS EREVESSMAQ ARHNGGGGGE NHPFTSLGRQ SSIYSLTLDE FQHALCENGK NFGSMNMDEF LVSIWNAEEN NNNQQQAAAA AGSHSVPANH
101: NGFNNNNNNG GEGGVGVFSG GSRGNEDANN KRGIANESSL PRQGSLTLPA PLCRKTVDEV WSEIHRGGGS GNGGDSNGRS SSSNGQNNAQ NGGETAARQP
201: TFGEMTLEDF LVKAGVVREH PTNPKPNPNP NQNQNPSSVI PAAAQQQLYG VFQGTGDPSF PGQAMGVGDP SGYAKRTGGG GYQQAPPVQA GVCYGGGVGF
301: GAGGQQMGMV GPLSPVSSDG LGHGQVDNIG GQYGVDMGGL RGRKRVVDGP VEKVVERRQR RMIKNRESAA RSRARKQAYT VELEAELNQL KEENAQLKHA
401: LAELERKRKQ QYFESLKSRA QPKLPKSNGR LRTLMRNPSC PL

Arabidopsis Description

ABI5Basic-leucine zipper (bZIP) transcription factor family protein [Source:TAIR;Acc:AT2G36270]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.