Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G372000.1 | Wheat | nucleus | 89.0 | 90.86 |
| TraesCS3A01G371900.3 | Wheat | nucleus | 87.21 | 89.27 |
| TraesCS3A01G372200.1 | Wheat | nucleus | 86.96 | 89.01 |
| TraesCS3A01G371800.1 | Wheat | nucleus | 79.28 | 79.28 |
| TraesCS3B01G404300.1 | Wheat | nucleus | 78.26 | 78.26 |
| TraesCS3D01G365000.1 | Wheat | nucleus | 78.77 | 77.78 |
| TraesCS3B01G404400.1 | Wheat | nucleus | 77.49 | 77.49 |
| TraesCS3B01G404500.1 | Wheat | nucleus | 77.49 | 77.49 |
| HORVU3Hr1G084360.2 | Barley | nucleus | 71.1 | 65.72 |
| Os01t0859300-01 | Rice | nucleus | 48.85 | 59.13 |
| KXG33733 | Sorghum | nucleus | 56.01 | 53.28 |
| Zm00001d012296_P001 | Maize | nucleus | 53.71 | 50.97 |
| Zm00001d042779_P001 | Maize | nucleus | 47.06 | 48.04 |
| CDX75056 | Canola | nucleus | 33.76 | 33.08 |
| CDX84141 | Canola | nucleus | 32.99 | 32.74 |
| KRG96191 | Soybean | nucleus | 31.97 | 32.3 |
| GSMUA_Achr8P07740_001 | Banana | nucleus | 28.64 | 32.28 |
| KRH22688 | Soybean | nucleus | 27.62 | 32.14 |
| VIT_06s0080g00340.t01 | Wine grape | nucleus | 26.6 | 32.1 |
| Bra017251.1-P | Field mustard | nucleus | 31.97 | 31.57 |
| CDY43738 | Canola | nucleus | 32.48 | 31.44 |
| TraesCS4A01G128900.1 | Wheat | nucleus | 17.9 | 31.11 |
| GSMUA_Achr3P22710_001 | Banana | nucleus | 27.88 | 31.05 |
| Bra005287.1-P | Field mustard | nucleus | 34.53 | 30.82 |
| TraesCS7A01G170600.1 | Wheat | nucleus | 26.85 | 30.61 |
| AT3G44460.1 | Thale cress | nucleus | 25.83 | 30.51 |
| AT2G36270.3 | Thale cress | nucleus | 34.53 | 30.41 |
| VIT_08s0007g03420.t01 | Wine grape | nucleus | 30.43 | 29.75 |
| TraesCS1A01G273000.1 | Wheat | nucleus | 19.18 | 29.64 |
| TraesCS1A01G306300.1 | Wheat | nucleus | 24.55 | 29.63 |
| CDY10500 | Canola | nucleus | 26.09 | 29.48 |
| Bra019436.1-P | Field mustard | nucleus | 25.32 | 29.46 |
| TraesCS3A01G337200.1 | Wheat | nucleus | 25.32 | 29.29 |
| TraesCS2A01G099400.1 | Wheat | nucleus | 20.46 | 29.2 |
| CDY08701 | Canola | nucleus | 25.83 | 29.19 |
| TraesCS6A01G333600.2 | Wheat | nucleus | 26.09 | 29.14 |
| PGSC0003DMT400006851 | Potato | nucleus | 31.71 | 28.97 |
| Solyc09g009490.2.1 | Tomato | nucleus | 31.46 | 28.87 |
| KRH32737 | Soybean | nucleus | 32.99 | 28.86 |
| TraesCS5A01G237200.2 | Wheat | nucleus | 26.6 | 28.26 |
| TraesCS3A01G378700.1 | Wheat | nucleus | 17.9 | 27.24 |
| KRH37750 | Soybean | nucleus | 14.58 | 27.01 |
| TraesCS5A01G141500.1 | Wheat | nucleus | 21.48 | 26.84 |
| KRH20056 | Soybean | nucleus | 33.76 | 26.72 |
| KRH26633 | Soybean | mitochondrion | 26.6 | 16.15 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G372100.2 | EnsemblPlantsGene:TraesCS3A01G372100 | Gene3D:1.20.5.170 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 |
| InterPro:bZIP | ncoils:Coil | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF187 | PFAM:PF00170 | SEG:seg |
| SMART:SM00338 | SUPFAM:SSF57959 | TIGR:cd14707 | MapMan:15.5.4.1 | : | : |
Description
No Description!
Coordinates
chr3A:+:622818413..622819925
Molecular Weight (calculated)
42289.5 Da
IEP (calculated)
6.097
GRAVY (calculated)
-0.501
Length
391 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSDMSKDVN FSKEEVTSHP RVLEGEEQTI APARQSSIFA PTLDELQYSM CEAGHNFGSM NMDEFMSNIW NAKEFQEATG GVLVGMEVAP VVGADGGRGG
101: EDAGGSNQAR QESFSLPPPL CRKMVEEVWA EINRETRLVH SQPQSARPSP LIPVEPPAGN GGGVAANEQR GTLGEMTLEQ FLVKVGVVRG SGTGGQAPVP
201: VGMVHGQMNP APANDMFQVM GDGMVYIPNG YAGIVVVPPP PPPQGGVGIV SPGSSDGRST MMEVDMMNCM GDKTMMDNSG ARKRGAPEDQ SCEGSIERRH
301: HHMIKNHESA AQSCGRKQAY TKELEAKLNH LKEENARLKA EEKTILLTKK QMVCTFSHHH VLVEKMMEQS KENVNTKKGG TLSRRCASCI W
101: EDAGGSNQAR QESFSLPPPL CRKMVEEVWA EINRETRLVH SQPQSARPSP LIPVEPPAGN GGGVAANEQR GTLGEMTLEQ FLVKVGVVRG SGTGGQAPVP
201: VGMVHGQMNP APANDMFQVM GDGMVYIPNG YAGIVVVPPP PPPQGGVGIV SPGSSDGRST MMEVDMMNCM GDKTMMDNSG ARKRGAPEDQ SCEGSIERRH
301: HHMIKNHESA AQSCGRKQAY TKELEAKLNH LKEENARLKA EEKTILLTKK QMVCTFSHHH VLVEKMMEQS KENVNTKKGG TLSRRCASCI W
001: MVTRETKLTS EREVESSMAQ ARHNGGGGGE NHPFTSLGRQ SSIYSLTLDE FQHALCENGK NFGSMNMDEF LVSIWNAEEN NNNQQQAAAA AGSHSVPANH
101: NGFNNNNNNG GEGGVGVFSG GSRGNEDANN KRGIANESSL PRQGSLTLPA PLCRKTVDEV WSEIHRGGGS GNGGDSNGRS SSSNGQNNAQ NGGETAARQP
201: TFGEMTLEDF LVKAGVVREH PTNPKPNPNP NQNQNPSSVI PAAAQQQLYG VFQGTGDPSF PGQAMGVGDP SGYAKRTGGG GYQQAPPVQA GVCYGGGVGF
301: GAGGQQMGMV GPLSPVSSDG LGHGQVDNIG GQYGVDMGGL RGRKRVVDGP VEKVVERRQR RMIKNRESAA RSRARKQAYT VELEAELNQL KEENAQLKHA
401: LAELERKRKQ QVKTPIEFAL LRWLQYFGQK KTTKWNCWFM VAVF
101: NGFNNNNNNG GEGGVGVFSG GSRGNEDANN KRGIANESSL PRQGSLTLPA PLCRKTVDEV WSEIHRGGGS GNGGDSNGRS SSSNGQNNAQ NGGETAARQP
201: TFGEMTLEDF LVKAGVVREH PTNPKPNPNP NQNQNPSSVI PAAAQQQLYG VFQGTGDPSF PGQAMGVGDP SGYAKRTGGG GYQQAPPVQA GVCYGGGVGF
301: GAGGQQMGMV GPLSPVSSDG LGHGQVDNIG GQYGVDMGGL RGRKRVVDGP VEKVVERRQR RMIKNRESAA RSRARKQAYT VELEAELNQL KEENAQLKHA
401: LAELERKRKQ QVKTPIEFAL LRWLQYFGQK KTTKWNCWFM VAVF
Arabidopsis Description
ABI5Basic-leucine zipper (bZIP) transcription factor family protein [Source:TAIR;Acc:AT2G36270]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.