Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G244500.1 | Wheat | nucleus | 96.74 | 97.27 |
| TraesCS5B01G235600.2 | Wheat | nucleus | 96.47 | 96.99 |
| HORVU5Hr1G068230.1 | Barley | nucleus | 93.21 | 93.46 |
| Os09t0456200-01 | Rice | nucleus | 75.54 | 73.94 |
| EER96850 | Sorghum | nucleus | 71.2 | 71.58 |
| Zm00001d020711_P001 | Maize | nucleus | 65.49 | 59.51 |
| KRH52002 | Soybean | cytosol | 14.67 | 55.1 |
| CDY65560 | Canola | nucleus | 44.02 | 53.64 |
| Zm00001d005884_P002 | Maize | nucleus | 44.29 | 53.44 |
| CDY28083 | Canola | nucleus | 33.7 | 52.32 |
| CDY17109 | Canola | nucleus | 44.84 | 49.25 |
| CDX99242 | Canola | nucleus | 46.47 | 48.31 |
| TraesCS6A01G333600.2 | Wheat | nucleus | 45.92 | 48.29 |
| Bra022409.1-P | Field mustard | nucleus | 45.92 | 47.74 |
| CDX92320 | Canola | nucleus | 45.92 | 47.61 |
| CDY18575 | Canola | nucleus | 45.11 | 47.16 |
| GSMUA_Achr6P30550_001 | Banana | nucleus | 50.82 | 46.98 |
| CDY51041 | Canola | nucleus | 42.12 | 46.97 |
| TraesCS7A01G170600.1 | Wheat | nucleus | 42.66 | 45.77 |
| GSMUA_Achr5P24570_001 | Banana | nucleus | 48.1 | 45.62 |
| Bra040260.1-P | Field mustard | nucleus | 44.84 | 45.33 |
| GSMUA_Achr5P05690_001 | Banana | nucleus | 49.46 | 44.72 |
| Bra001742.1-P | Field mustard | nucleus | 42.93 | 44.51 |
| CDY63041 | Canola | nucleus | 42.66 | 44.35 |
| CDX82302 | Canola | nucleus | 43.75 | 44.23 |
| GSMUA_Achr6P04270_001 | Banana | nucleus | 45.92 | 44.13 |
| GSMUA_Achr9P27130_001 | Banana | nucleus | 48.1 | 43.92 |
| CDY68227 | Canola | nucleus | 41.58 | 43.84 |
| CDX69020 | Canola | nucleus | 41.3 | 43.43 |
| Bra018800.1-P | Field mustard | nucleus | 42.93 | 42.93 |
| Bra037533.1-P | Field mustard | nucleus | 45.11 | 42.78 |
| GSMUA_Achr3P07000_001 | Banana | nucleus | 46.47 | 42.43 |
| CDY58256 | Canola | nucleus | 44.57 | 41.94 |
| KRH61298 | Soybean | nucleus | 47.01 | 41.49 |
| VIT_03s0063g00310.t01 | Wine grape | nucleus | 45.92 | 41.32 |
| Solyc01g108080.2.1 | Tomato | nucleus | 46.2 | 41.06 |
| KRH50289 | Soybean | nucleus | 46.74 | 40.57 |
| PGSC0003DMT400059040 | Potato | nucleus | 40.22 | 40.44 |
| PGSC0003DMT400066603 | Potato | nucleus | 45.11 | 40.1 |
| AT3G19290.3 | Thale cress | nucleus | 47.01 | 40.05 |
| VIT_18s0001g10450.t01 | Wine grape | nucleus | 48.1 | 39.6 |
| AT1G45249.6 | Thale cress | nucleus | 45.92 | 39.21 |
| KRH71134 | Soybean | nucleus | 46.47 | 38.95 |
| CDX72445 | Canola | nucleus | 42.66 | 38.29 |
| Solyc04g078840.2.1 | Tomato | nucleus | 46.47 | 38.26 |
| PGSC0003DMT400015892 | Potato | nucleus | 42.39 | 37.68 |
| Solyc10g050210.1.1 | Tomato | nucleus | 39.67 | 37.63 |
| PGSC0003DMT400020670 | Potato | nucleus | 46.2 | 37.53 |
| AT1G49720.2 | Thale cress | nucleus | 40.76 | 37.22 |
| Solyc11g044560.1.1 | Tomato | nucleus | 39.95 | 36.84 |
| AT4G34000.2 | Thale cress | nucleus | 44.57 | 36.12 |
| TraesCS1A01G306300.1 | Wheat | nucleus | 30.71 | 34.88 |
| Bra011485.1-P | Field mustard | nucleus | 40.49 | 33.94 |
| KRH52003 | Soybean | nucleus | 29.89 | 33.43 |
| TraesCS3A01G337200.1 | Wheat | nucleus | 30.43 | 33.14 |
| TraesCS4A01G128900.1 | Wheat | nucleus | 20.11 | 32.89 |
| TraesCS2A01G099400.1 | Wheat | nucleus | 24.46 | 32.85 |
| TraesCS5A01G141500.1 | Wheat | nucleus | 25.27 | 29.71 |
| TraesCS3A01G371800.1 | Wheat | nucleus | 31.25 | 29.41 |
| Bra017621.1-P | Field mustard | cytosol | 23.64 | 29.19 |
| CDY22378 | Canola | nucleus | 30.98 | 28.86 |
| CDX71528 | Canola | nucleus | 30.43 | 28.64 |
| TraesCS3A01G378700.1 | Wheat | nucleus | 19.84 | 28.4 |
| TraesCS3A01G372000.1 | Wheat | nucleus | 29.35 | 28.2 |
| TraesCS1A01G273000.1 | Wheat | nucleus | 19.29 | 28.06 |
| TraesCS3A01G371900.3 | Wheat | nucleus | 28.8 | 27.75 |
| AT5G42910.1 | Thale cress | nucleus | 27.72 | 27.57 |
| Bra033649.1-P | Field mustard | nucleus | 30.43 | 27.05 |
| TraesCS3A01G372200.1 | Wheat | nucleus | 27.72 | 26.7 |
| TraesCS3A01G372100.2 | Wheat | nucleus | 28.26 | 26.6 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 |
| PFAM:PF00170 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF190 | SMART:SM00338 |
| SUPFAM:SSF57959 | EnsemblPlantsGene:TraesCS5A01G237200 | EnsemblPlants:TraesCS5A01G237200.2 | InterPro:bZIP | TIGR:cd14707 | SEG:seg |
Description
No Description!
Coordinates
chr5A:-:452934404..452937542
Molecular Weight (calculated)
39402.0 Da
IEP (calculated)
8.988
GRAVY (calculated)
-0.540
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MLKEDRWGGT EGIMDFRSSN GGSSSERRPA DGAPLTRQGS IYSLTFEEFQ STLGGGAGVG GSDLGKDFSS MNMDELLRSI WTAEESQAMA ASASGAGAGA
101: GPPPTSLQGQ GSLTLPRTLS AKTVDEVWRN LVRDDPLPVG PEGAEPQPHR QATLGEMTLE EFLVKAGVVR EIPTAPAVPP PPMQPRPVPV VPKGPSFYGN
201: FPSANDAGAA ALGFAPVAMG DLAMGNGLMP RAVGMGGAPL VVQTAVNPVD SGSKGSEDLS SPSEPMPYSF EGIVRGRRTG GGVEKVVERR QRRMIKNRES
301: AARSRARKQA YTMELEAEVQ KLKDLNQELV RKQAEILEMQ KREQAPEMKD QFGRKKRQCL RRTLTGPW
101: GPPPTSLQGQ GSLTLPRTLS AKTVDEVWRN LVRDDPLPVG PEGAEPQPHR QATLGEMTLE EFLVKAGVVR EIPTAPAVPP PPMQPRPVPV VPKGPSFYGN
201: FPSANDAGAA ALGFAPVAMG DLAMGNGLMP RAVGMGGAPL VVQTAVNPVD SGSKGSEDLS SPSEPMPYSF EGIVRGRRTG GGVEKVVERR QRRMIKNRES
301: AARSRARKQA YTMELEAEVQ KLKDLNQELV RKQAEILEMQ KREQAPEMKD QFGRKKRQCL RRTLTGPW
001: MGSRLNFKSF VDGVSEQQPT VGTSLPLTRQ NSVFSLTFDE FQNSWGGGIG KDFGSMNMDE LLKNIWTAEE SHSMMGNNTS YTNISNGNSG NTVINGGGNN
101: IGGLAVGVGG ESGGFFTGGS LQRQGSLTLP RTISQKRVDD VWKELMKEDD IGNGVVNGGT SGIPQRQQTL GEMTLEEFLV RAGVVREEPQ PVESVTNFNG
201: GFYGFGSNGG LGTASNGFVA NQPQDLSGNG VAVRQDLLTA QTQPLQMQQP QMVQQPQMVQ QPQQLIQTQE RPFPKQTTIA FSNTVDVVNR SQPATQCQEV
301: KPSILGIHNH PMNNNLLQAV DFKTGVTVAA VSPGSQMSPD LTPKSALDAS LSPVPYMFGR VRKTGAVLEK VIERRQKRMI KNRESAARSR ARKQAYTMEL
401: EAEIAQLKEL NEELQKKQVC LASSLSQLRI SRFSYFLEVV FTDQMFHAG
101: IGGLAVGVGG ESGGFFTGGS LQRQGSLTLP RTISQKRVDD VWKELMKEDD IGNGVVNGGT SGIPQRQQTL GEMTLEEFLV RAGVVREEPQ PVESVTNFNG
201: GFYGFGSNGG LGTASNGFVA NQPQDLSGNG VAVRQDLLTA QTQPLQMQQP QMVQQPQMVQ QPQQLIQTQE RPFPKQTTIA FSNTVDVVNR SQPATQCQEV
301: KPSILGIHNH PMNNNLLQAV DFKTGVTVAA VSPGSQMSPD LTPKSALDAS LSPVPYMFGR VRKTGAVLEK VIERRQKRMI KNRESAARSR ARKQAYTMEL
401: EAEIAQLKEL NEELQKKQVC LASSLSQLRI SRFSYFLEVV FTDQMFHAG
Arabidopsis Description
ABF3ABSCISIC ACID-INSENSITIVE 5-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9M7Q3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.