Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_04s0069g01150.t01 | Wine grape | nucleus | 8.31 | 59.65 |
| CDY28083 | Canola | nucleus | 33.5 | 57.81 |
| Solyc01g108080.2.1 | Tomato | nucleus | 57.21 | 56.52 |
| VIT_18s0001g10450.t01 | Wine grape | nucleus | 61.61 | 56.38 |
| PGSC0003DMT400066603 | Potato | nucleus | 56.97 | 56.28 |
| CDX99242 | Canola | nucleus | 48.66 | 56.21 |
| CDY18575 | Canola | nucleus | 47.68 | 55.4 |
| CDY68227 | Canola | nucleus | 47.19 | 55.3 |
| CDX69020 | Canola | nucleus | 47.19 | 55.14 |
| KRH50289 | Soybean | nucleus | 56.97 | 54.95 |
| Bra022409.1-P | Field mustard | nucleus | 47.19 | 54.52 |
| CDX92320 | Canola | nucleus | 47.19 | 54.37 |
| GSMUA_Achr6P30550_001 | Banana | nucleus | 52.57 | 54.02 |
| PGSC0003DMT400059040 | Potato | nucleus | 47.92 | 53.55 |
| Bra001742.1-P | Field mustard | nucleus | 46.45 | 53.52 |
| CDY63041 | Canola | nucleus | 46.21 | 53.39 |
| Bra037533.1-P | Field mustard | nucleus | 50.61 | 53.35 |
| CDY58256 | Canola | nucleus | 50.61 | 52.94 |
| CDX82302 | Canola | nucleus | 46.94 | 52.75 |
| KRH71134 | Soybean | nucleus | 56.48 | 52.62 |
| GSMUA_Achr9P27130_001 | Banana | nucleus | 51.59 | 52.36 |
| Os06t0211200-01 | Rice | nucleus | 41.32 | 52.16 |
| CDY51041 | Canola | nucleus | 42.05 | 52.12 |
| AT3G19290.3 | Thale cress | nucleus | 54.77 | 51.85 |
| Solyc10g050210.1.1 | Tomato | nucleus | 49.14 | 51.8 |
| TraesCS6B01G364000.1 | Wheat | nucleus | 44.01 | 51.28 |
| HORVU6Hr1G080670.1 | Barley | nucleus | 44.74 | 51.26 |
| PGSC0003DMT400015892 | Potato | nucleus | 51.83 | 51.21 |
| TraesCS6A01G333600.2 | Wheat | nucleus | 43.77 | 51.14 |
| GSMUA_Achr5P05690_001 | Banana | nucleus | 50.86 | 51.11 |
| Os08t0472000-01 | Rice | nucleus | 39.61 | 50.94 |
| EES07580 | Sorghum | nucleus | 42.79 | 50.58 |
| GSMUA_Achr5P24570_001 | Banana | nucleus | 47.68 | 50.26 |
| CDX72445 | Canola | nucleus | 50.12 | 50.0 |
| TraesCS6D01G312800.1 | Wheat | nucleus | 43.77 | 49.72 |
| Bra018800.1-P | Field mustard | nucleus | 44.5 | 49.46 |
| EER96850 | Sorghum | nucleus | 44.25 | 49.45 |
| OQU80633 | Sorghum | nucleus | 45.97 | 49.21 |
| GSMUA_Achr6P04270_001 | Banana | nucleus | 45.97 | 49.09 |
| OQU78764 | Sorghum | nucleus | 37.41 | 49.04 |
| Solyc11g044560.1.1 | Tomato | nucleus | 47.68 | 48.87 |
| Zm00001d037170_P001 | Maize | nucleus | 40.34 | 48.82 |
| Os02t0766700-01 | Rice | nucleus | 42.54 | 48.74 |
| Zm00001d018178_P001 | Maize | nucleus | 41.81 | 48.72 |
| Os09t0456200-01 | Rice | nucleus | 44.74 | 48.67 |
| HORVU7Hr1G035500.2 | Barley | nucleus | 39.36 | 48.35 |
| TraesCS7B01G075600.1 | Wheat | nucleus | 39.61 | 47.65 |
| TraesCS7D01G171300.1 | Wheat | nucleus | 39.85 | 47.25 |
| TraesCS7A01G170600.1 | Wheat | nucleus | 39.61 | 47.23 |
| Zm00001d044940_P002 | Maize | nucleus | 40.34 | 47.01 |
| AT4G34000.2 | Thale cress | nucleus | 52.08 | 46.92 |
| KXG19586 | Sorghum | nucleus | 39.85 | 46.84 |
| HORVU5Hr1G068230.1 | Barley | nucleus | 41.56 | 46.32 |
| TraesCS5A01G237200.2 | Wheat | nucleus | 41.32 | 45.92 |
| TraesCS5B01G235600.2 | Wheat | nucleus | 41.08 | 45.9 |
| TraesCS5D01G244500.1 | Wheat | nucleus | 40.83 | 45.63 |
| AT1G49720.2 | Thale cress | nucleus | 44.01 | 44.66 |
| Bra011485.1-P | Field mustard | nucleus | 47.68 | 44.42 |
| Zm00001d031790_P002 | Maize | nucleus | 38.39 | 43.98 |
| GSMUA_Achr3P07000_001 | Banana | nucleus | 43.28 | 43.92 |
| KXG26981 | Sorghum | nucleus | 17.6 | 43.64 |
| VIT_06s0009g01790.t01 | Wine grape | nucleus | 26.16 | 43.15 |
| Zm00001d050018_P007 | Maize | nucleus | 39.85 | 41.69 |
| Zm00001d020711_P001 | Maize | nucleus | 40.83 | 41.23 |
| Bra017621.1-P | Field mustard | cytosol | 29.58 | 40.6 |
| VIT_13s0175g00120.t01 | Wine grape | nucleus | 31.3 | 39.38 |
| VIT_08s0007g03420.t01 | Wine grape | nucleus | 35.94 | 36.75 |
| Zm00001d005884_P002 | Maize | nucleus | 27.14 | 36.39 |
| VIT_12s0034g00110.t01 | Wine grape | nucleus | 8.56 | 35.35 |
| VIT_06s0080g00340.t01 | Wine grape | nucleus | 27.38 | 34.57 |
| VIT_12s0055g00420.t01 | Wine grape | nucleus | 23.72 | 32.44 |
| VIT_18s0001g04500.t01 | Wine grape | nucleus | 22.98 | 30.23 |
| VIT_18s0072g00470.t01 | Wine grape | nucleus, plastid | 20.05 | 29.82 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | EMBL:AM438711 | ProteinID:CAN64991 | ProteinID:CAN64991.1 | ProteinID:CCB56860 |
| ProteinID:CCB56860.1 | ncoils:Coil | UniProt:F6HQA3 | EMBL:FN596006 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 | PFAM:PF00170 | ScanProsite:PS00036 |
| PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF158 | SMART:SM00338 | SUPFAM:SSF57959 | TIGR:TC68088 |
| UniParc:UPI0002108577 | ArrayExpress:VIT_03s0063g00310 | EnsemblPlantsGene:VIT_03s0063g00310 | EnsemblPlants:VIT_03s0063g00310.t01 | InterPro:bZIP | SEG:seg |
Description
No Description!
Coordinates
chr3:-:3887073..3890514
Molecular Weight (calculated)
44360.5 Da
IEP (calculated)
10.301
GRAVY (calculated)
-0.668
Length
409 amino acids
Sequence
(BLAST)
(BLAST)
001: MNFKNFSDMP PEGNGGKPLG NFSLTRQPSI YSLTIDEFQN SLGGVGKDFG SMNMDELLKN IWTAEETQNM TSSAGGEGSV PGGNLQRQGS LTLPRTISQK
101: TVDEVWKDLL KENSALKEGS VGGPPNLQQR QPTLGEMTLE EFLVRVGVVR EDAQPIVRPN NSGFYGLSSQ PNHAGLGLGF QQSGRNNGAL TNQITESNYL
201: VPNQPPSLAL NMSGARSSQQ QQQDHHHQQQ HQPLFPKQAT VAFSSPMHLT NTTQLASSGV RGANGGLQSG GMAMIGLGTG AVLGASGSPA SHISSDVIGK
301: SNVNTSSLSP APYVFNGSQR GRKPGALEKV VERRQRRMIK NRESAARSRA RKQAYTLELE MEVAKLKEAN EELQKKQADM EVQKNQILET IRQRGGKRLC
401: LRRTLTGPW
101: TVDEVWKDLL KENSALKEGS VGGPPNLQQR QPTLGEMTLE EFLVRVGVVR EDAQPIVRPN NSGFYGLSSQ PNHAGLGLGF QQSGRNNGAL TNQITESNYL
201: VPNQPPSLAL NMSGARSSQQ QQQDHHHQQQ HQPLFPKQAT VAFSSPMHLT NTTQLASSGV RGANGGLQSG GMAMIGLGTG AVLGASGSPA SHISSDVIGK
301: SNVNTSSLSP APYVFNGSQR GRKPGALEKV VERRQRRMIK NRESAARSRA RKQAYTLELE MEVAKLKEAN EELQKKQADM EVQKNQILET IRQRGGKRLC
401: LRRTLTGPW
001: MDGSMNLGNE PPGDGGGGGG LTRQGSIYSL TFDEFQSSVG KDFGSMNMDE LLKNIWSAEE TQAMASGVVP VLGGGQEGLQ LQRQGSLTLP RTLSQKTVDQ
101: VWKDLSKVGS SGVGGSNLSQ VAQAQSQSQS QRQQTLGEVT LEEFLVRAGV VREEAQVAAR AQIAENNKGG YFGNDANTGF SVEFQQPSPR VVAAGVMGNL
201: GAETANSLQV QGSSLPLNVN GARTTYQQSQ QQQPIMPKQP GFGYGTQMGQ LNSPGIRGGG LVGLGDQSLT NNVGFVQGAS AAIPGALGVG AVSPVTPLSS
301: EGIGKSNGDS SSLSPSPYMF NGGVRGRKSG TVEKVVERRQ RRMIKNRESA ARSRARKQAY TVELEAEVAK LKEENDELQR KQARIMEMQK NQETEMRNLL
401: QGGPKKKLRR TESGPW
101: VWKDLSKVGS SGVGGSNLSQ VAQAQSQSQS QRQQTLGEVT LEEFLVRAGV VREEAQVAAR AQIAENNKGG YFGNDANTGF SVEFQQPSPR VVAAGVMGNL
201: GAETANSLQV QGSSLPLNVN GARTTYQQSQ QQQPIMPKQP GFGYGTQMGQ LNSPGIRGGG LVGLGDQSLT NNVGFVQGAS AAIPGALGVG AVSPVTPLSS
301: EGIGKSNGDS SSLSPSPYMF NGGVRGRKSG TVEKVVERRQ RRMIKNRESA ARSRARKQAY TVELEAEVAK LKEENDELQR KQARIMEMQK NQETEMRNLL
401: QGGPKKKLRR TESGPW
Arabidopsis Description
ABF2abscisic acid responsive elements-binding factor 2 [Source:TAIR;Acc:AT1G45249]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.