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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_04s0069g01150.t01 Wine grape nucleus 11.9 64.91
GSMUA_Achr2P07520_001 Banana nucleus 34.73 49.54
VIT_06s0009g01790.t01 Wine grape nucleus 32.8 41.13
VIT_12s0034g00110.t01 Wine grape nucleus 12.86 40.4
VIT_13s0175g00120.t01 Wine grape nucleus 40.19 38.46
KRH18840 Soybean nucleus 25.72 29.63
KRH16634 Soybean mitochondrion 26.69 28.23
VIT_12s0055g00420.t01 Wine grape nucleus 24.44 25.42
VIT_06s0080g00340.t01 Wine grape nucleus 25.72 24.69
VIT_18s0072g00470.t01 Wine grape nucleus, plastid 20.58 23.27
VIT_18s0001g10450.t01 Wine grape nucleus 33.12 23.04
VIT_03s0063g00310.t01 Wine grape nucleus 30.23 22.98
VIT_08s0007g03420.t01 Wine grape nucleus 28.94 22.5
KRH26009 Soybean nucleus, plastid 11.25 18.92
Protein Annotations
Gene3D:1.20.5.170EntrezGene:100242121wikigene:100242121MapMan:15.5.4.1ProteinID:CCB45538ProteinID:CCB45538.1
UniProt:F6H0P1EMBL:FN595227GO:GO:0003674GO:GO:0003700GO:GO:0006139GO:GO:0006355
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987InterPro:IPR004827EntrezGene:LOC100242121
wikigene:LOC100242121PFAM:PF00170ScanProsite:PS00036PFscan:PS50217PANTHER:PTHR22952PANTHER:PTHR22952:SF137
SMART:SM00338SUPFAM:SSF57959UniParc:UPI00015C74F4ArrayExpress:VIT_18s0001g04500EnsemblPlantsGene:VIT_18s0001g04500EnsemblPlants:VIT_18s0001g04500.t01
RefSeq:XP_002284298RefSeq:XP_002284298.2InterPro:bZIPSEG:seg::
Description
No Description!
Coordinates
chr18:+:3875315..3878509
Molecular Weight (calculated)
34874.4 Da
IEP (calculated)
8.450
GRAVY (calculated)
-0.516
Length
311 amino acids
Sequence
(BLAST)
001: MASANRSQQS KFPQGYLYHL IFNELQTQLG NVGKPLSSMY LDELLKHVIS AEKGQYFMQN PAASSSSSSS SPASLFLGNF NLNGVLDKKT VEEVWEEILH
101: HQHLSGADNG PIQHLSTLGE TTLEEFLVRA GVISLGNQNG STANAQPFMT MDPMAVVPQQ PADWFQLPVE AAQQQQPGVL DSSFHVSESV FEGPAIEIGY
201: SKNQMAMSTA VPAVTTSSPN SPVAVERKRW FSDEMMKTIE RRQKRMIKNR ESAARSRARK QAYTNHLEHE VHQLKKENDL LIRLKELQMR WSLNPTPGPK
301: YQLRRTSSCL F
Best Arabidopsis Sequence Match ( AT2G41070.4 )
(BLAST)
001: MSSQLKATYM GSIRGNIEEP ISQSLTRQNS LYSLKLHEVQ THLGSSGKPL GSMNLDELLK TVLPPAEEGL VRQGSLTLPR DLSKKTVDEV WRDIQQDKNG
101: NGTSTTTTHK QPTLGEITLE DLLLRAGVVT ETVVPQENVV NIASNGQWVE YHHQPQQQQG FMTYPVCEMQ DMVMMGGLSD TPQAPGRKRV AGEIVEKTVE
201: RRQKRMIKNR ESAARSRARK QAYTHELEIK VSRLEEENEK LRRLKEVEKI LPSEPPPDPK WKLRRTNSAS L
Arabidopsis Description
EELBasic-leucine zipper (bZIP) transcription factor family protein [Source:TAIR;Acc:AT2G41070]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.