Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 2
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
VIT_04s0069g01150.t01 | Wine grape | nucleus | 11.9 | 64.91 |
GSMUA_Achr2P07520_001 | Banana | nucleus | 34.73 | 49.54 |
VIT_06s0009g01790.t01 | Wine grape | nucleus | 32.8 | 41.13 |
VIT_12s0034g00110.t01 | Wine grape | nucleus | 12.86 | 40.4 |
VIT_13s0175g00120.t01 | Wine grape | nucleus | 40.19 | 38.46 |
KRH18840 | Soybean | nucleus | 25.72 | 29.63 |
KRH16634 | Soybean | mitochondrion | 26.69 | 28.23 |
VIT_12s0055g00420.t01 | Wine grape | nucleus | 24.44 | 25.42 |
VIT_06s0080g00340.t01 | Wine grape | nucleus | 25.72 | 24.69 |
VIT_18s0072g00470.t01 | Wine grape | nucleus, plastid | 20.58 | 23.27 |
VIT_18s0001g10450.t01 | Wine grape | nucleus | 33.12 | 23.04 |
VIT_03s0063g00310.t01 | Wine grape | nucleus | 30.23 | 22.98 |
VIT_08s0007g03420.t01 | Wine grape | nucleus | 28.94 | 22.5 |
KRH26009 | Soybean | nucleus, plastid | 11.25 | 18.92 |
Protein Annotations
Gene3D:1.20.5.170 | EntrezGene:100242121 | wikigene:100242121 | MapMan:15.5.4.1 | ProteinID:CCB45538 | ProteinID:CCB45538.1 |
UniProt:F6H0P1 | EMBL:FN595227 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 | EntrezGene:LOC100242121 |
wikigene:LOC100242121 | PFAM:PF00170 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF137 |
SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI00015C74F4 | ArrayExpress:VIT_18s0001g04500 | EnsemblPlantsGene:VIT_18s0001g04500 | EnsemblPlants:VIT_18s0001g04500.t01 |
RefSeq:XP_002284298 | RefSeq:XP_002284298.2 | InterPro:bZIP | SEG:seg | : | : |
Description
No Description!
Coordinates
chr18:+:3875315..3878509
Molecular Weight (calculated)
34874.4 Da
IEP (calculated)
8.450
GRAVY (calculated)
-0.516
Length
311 amino acids
Sequence
(BLAST)
(BLAST)
001: MASANRSQQS KFPQGYLYHL IFNELQTQLG NVGKPLSSMY LDELLKHVIS AEKGQYFMQN PAASSSSSSS SPASLFLGNF NLNGVLDKKT VEEVWEEILH
101: HQHLSGADNG PIQHLSTLGE TTLEEFLVRA GVISLGNQNG STANAQPFMT MDPMAVVPQQ PADWFQLPVE AAQQQQPGVL DSSFHVSESV FEGPAIEIGY
201: SKNQMAMSTA VPAVTTSSPN SPVAVERKRW FSDEMMKTIE RRQKRMIKNR ESAARSRARK QAYTNHLEHE VHQLKKENDL LIRLKELQMR WSLNPTPGPK
301: YQLRRTSSCL F
101: HQHLSGADNG PIQHLSTLGE TTLEEFLVRA GVISLGNQNG STANAQPFMT MDPMAVVPQQ PADWFQLPVE AAQQQQPGVL DSSFHVSESV FEGPAIEIGY
201: SKNQMAMSTA VPAVTTSSPN SPVAVERKRW FSDEMMKTIE RRQKRMIKNR ESAARSRARK QAYTNHLEHE VHQLKKENDL LIRLKELQMR WSLNPTPGPK
301: YQLRRTSSCL F
001: MSSQLKATYM GSIRGNIEEP ISQSLTRQNS LYSLKLHEVQ THLGSSGKPL GSMNLDELLK TVLPPAEEGL VRQGSLTLPR DLSKKTVDEV WRDIQQDKNG
101: NGTSTTTTHK QPTLGEITLE DLLLRAGVVT ETVVPQENVV NIASNGQWVE YHHQPQQQQG FMTYPVCEMQ DMVMMGGLSD TPQAPGRKRV AGEIVEKTVE
201: RRQKRMIKNR ESAARSRARK QAYTHELEIK VSRLEEENEK LRRLKEVEKI LPSEPPPDPK WKLRRTNSAS L
101: NGTSTTTTHK QPTLGEITLE DLLLRAGVVT ETVVPQENVV NIASNGQWVE YHHQPQQQQG FMTYPVCEMQ DMVMMGGLSD TPQAPGRKRV AGEIVEKTVE
201: RRQKRMIKNR ESAARSRARK QAYTHELEIK VSRLEEENEK LRRLKEVEKI LPSEPPPDPK WKLRRTNSAS L
Arabidopsis Description
EELBasic-leucine zipper (bZIP) transcription factor family protein [Source:TAIR;Acc:AT2G41070]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.