Factsheet for Bra017621.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX72445	Canola	nucleus	84.9	61.71
Bra011485.1-P	Field mustard	nucleus	74.16	50.34
AT4G34000.2	Thale cress	nucleus	72.48	47.58
Bra022409.1-P	Field mustard	nucleus	35.91	30.23
VIT_03s0063g00310.t01	Wine grape	nucleus	40.6	29.58
Bra001742.1-P	Field mustard	nucleus	34.23	28.73
Bra037533.1-P	Field mustard	nucleus	36.58	28.09
Solyc01g108080.2.1	Tomato	nucleus	37.92	27.29
TraesCS6A01G333600.2	Wheat	nucleus	31.88	27.14
PGSC0003DMT400066603	Potato	nucleus	37.58	27.05
Bra040260.1-P	Field mustard	nucleus	32.89	26.92
HORVU6Hr1G080670.1	Barley	nucleus	32.21	26.89
KRH50289	Soybean	nucleus	38.26	26.89
EES07580	Sorghum	nucleus	31.21	26.88
TraesCS6B01G364000.1	Wheat	nucleus	31.54	26.78
PGSC0003DMT400059040	Potato	nucleus	32.89	26.78
Os02t0766700-01	Rice	nucleus	31.88	26.61
TraesCS6D01G312800.1	Wheat	nucleus	31.88	26.39
OQU78764	Sorghum	nucleus	27.52	26.28
Bra018800.1-P	Field mustard	nucleus	32.21	26.09
GSMUA_Achr9P27130_001	Banana	nucleus	34.9	25.81
Os06t0211200-01	Rice	nucleus	27.52	25.31
KRH71134	Soybean	nucleus	37.25	25.28
HORVU7Hr1G035500.2	Barley	nucleus	28.19	25.23
Zm00001d037170_P001	Maize	nucleus	28.52	25.15
GSMUA_Achr6P30550_001	Banana	nucleus	33.56	25.13
Zm00001d018178_P001	Maize	nucleus	29.53	25.07
Zm00001d031790_P002	Maize	nucleus	29.87	24.93
TraesCS7B01G075600.1	Wheat	nucleus	28.19	24.71
Solyc11g044560.1.1	Tomato	nucleus	32.89	24.56
OQU80633	Sorghum	nucleus	31.21	24.35
Zm00001d044940_P002	Maize	nucleus	28.52	24.22
TraesCS7A01G170600.1	Wheat	nucleus	27.85	24.2
TraesCS7D01G171300.1	Wheat	nucleus	27.85	24.06
EER96850	Sorghum	nucleus	29.53	24.04
GSMUA_Achr5P24570_001	Banana	nucleus	31.21	23.97
TraesCS5A01G237200.2	Wheat	nucleus	29.19	23.64
TraesCS5B01G235600.2	Wheat	nucleus	28.86	23.5
HORVU5Hr1G068230.1	Barley	nucleus	28.86	23.43
GSMUA_Achr5P05690_001	Banana	nucleus	31.88	23.34
KXG19586	Sorghum	nucleus	27.18	23.28
TraesCS5D01G244500.1	Wheat	nucleus	28.52	23.22
PGSC0003DMT400015892	Potato	nucleus	32.21	23.19
Os09t0456200-01	Rice	nucleus	29.19	23.14
Zm00001d050018_P007	Maize	nucleus	29.87	22.76
GSMUA_Achr6P04270_001	Banana	nucleus	29.19	22.72
Solyc10g050210.1.1	Tomato	nucleus	29.19	22.42
Zm00001d020711_P001	Maize	nucleus	29.53	21.73
GSMUA_Achr3P07000_001	Banana	nucleus	29.19	21.59
Os08t0472000-01	Rice	nucleus	22.48	21.07
Bra007276.1-P	Field mustard	nucleus	19.8	20.92
Bra007274.1-P	Field mustard	nucleus	19.46	20.57
Bra016953.1-P	Field mustard	nucleus	17.79	19.85
Bra004597.1-P	Field mustard	nucleus	18.46	19.57
Zm00001d005884_P002	Maize	nucleus	18.46	18.03
Bra014668.1-P	Field mustard	nucleus	13.76	17.9
Bra019436.1-P	Field mustard	nucleus	20.13	17.86
Bra017251.1-P	Field mustard	nucleus	22.82	17.17
Bra005287.1-P	Field mustard	nucleus	24.16	16.44
Bra033649.1-P	Field mustard	nucleus	22.15	15.94
Bra003253.1-P	Field mustard	plastid	18.46	13.65
Bra015281.1-P	Field mustard	nucleus, plastid	9.4	10.45
Bra033719.1-P	Field mustard	nucleus, plastid	7.72	8.65
KXG26981	Sorghum	nucleus	0.34	0.61

Protein Annotations

EnsemblPlants:Bra017621.1	EnsemblPlants:Bra017621.1-P	EnsemblPlantsGene:Bra017621	PANTHER:PTHR22952	PANTHER:PTHR22952:SF158	SEG:seg
UniParc:UPI00025411ED	UniProt:M4DM89	MapMan:35.1	:	:	:

Description

AT3G19290 (E=1e-037) ABF4, AREB2 | ABF4 (ABRE BINDING FACTOR 4); DNA binding / protein binding / transcription activator/ transcription factor

Coordinates

chrA03:+:29372225..29373216

Molecular Weight (calculated)

33023.3 Da

IEP (calculated)

5.021

GRAVY (calculated)

-0.542

Length

298 amino acids

Sequence
(BLAST)

001: MGSRMNFVDV VRDEVINAKQ PALGSGLPLT RQNSVFSLTF DEFQNSWGGG IGKDFGFMNM DELLKSIWTA EESHSVMANN TVINRVDNNG GLSVGVGGEV
101: GDSGLQRQGS ITLPRTISQK RVDDVWKELM KEDDTGASGI PQRQQTLGEM TLEEFLLKAG VVREEPQQQV ERLDNINGGF YGFGTNAGLG SAPNEFGPNQ
201: PHGSMVRPQP LQMLQPHKVQ QPQQLIQKQV EPFPKQTTLA FSNPVGLDNR SQPPTQYQEV KLSILGVRPM NNNNLQDVDF KQELQLGKYL MEARCHLI

Best Arabidopsis Sequence Match ( AT4G34000.3 )
(BLAST)

001: MGSRLNFKSF VDGVSEQQPT VGTSLPLTRQ NSVFSLTFDE FQNSWGGGIG KDFGSMNMDE LLKNIWTAEE SHSMMGNNTS YTNISNGNSG NTVINGGGNN
101: IGGLAVGVGG ESGGFFTGGS LQRQGSLTLP RTISQKRVDD VWKELMKEDD IGNGVVNGGT SGIPQRQQTL GEMTLEEFLV RAGVVREEPQ PVESVTNFNG
201: GFYGFGSNGG LGTASNGFVA NQPQDLSGNG VAVRQDLLTA QTQPLQMQQP QMVQQPQMVQ QPQQLIQTQE RPFPKQTTIA FSNTVDVVNR SQPATQCQEV
301: KPSILGIHNH PMNNNLLQAV DFKTGVTVAA VSPGSQMSPD LTPKSALDAS LSPVPYMFGR VRKTGAVLEK VIERRQKRMI KNRESAARSR ARKQAYTMEL
401: EAEIAQLKEL NEELQKKQVC LASSLSQLRI SRFSYFLEVV FTDQMFHAG

Arabidopsis Description

ABF3ABSCISIC ACID-INSENSITIVE 5-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9M7Q3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.