Factsheet for Bra019436.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra001031.1-P
Bra003253.1-P
Bra004004.1-P
Bra004368.1-P
Bra007274.1-P
Bra007276.1-P
Bra014668.1-P
Bra019706.1-P
Bra020600.1-P
Bra025400.1-P
Bra026891.1-P
Bra033105.1-P
Bra036210.1-P
Bra039157.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G44460.1	Bra019706.1-P	AT1G13740.1	18484180
AT3G44460.1	Bra026891.1-P	AT1G13740.1	18484180
AT3G44460.1	Bra020600.1-P	AT1G48150.1	15805477
AT3G44460.1	Bra004004.1-P	AT1G69260.1	18484180
AT3G44460.1	Bra004368.1-P	AT1G69260.1	18484180
AT3G44460.1	Bra001031.1-P	AT3G02140.1	18484180
AT3G44460.1	Bra039157.1-P	AT3G02140.1	18484180
AT3G44460.1	Bra025400.1-P	AT3G29575.1	18484180
AT3G44460.1	Bra033105.1-P	AT3G29575.1	18484180
AT3G44460.1	Bra036210.1-P	AT3G29575.1	18484180
AT3G44460.1	Bra003253.1-P	AT3G56850.1	21798944
AT3G44460.1	Bra007274.1-P	AT3G56850.1	21798944
AT3G44460.1	Bra007276.1-P	AT3G56850.1	21798944
AT3G44460.1	Bra014668.1-P	AT3G56850.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY10500	Canola	nucleus	99.11	96.24
CDY08701	Canola	nucleus	96.73	93.93
AT3G44460.1	Thale cress	nucleus	78.57	79.76
KRH22688	Soybean	nucleus	39.29	39.29
VIT_06s0080g00340.t01	Wine grape	nucleus	35.42	36.73
Bra014668.1-P	Field mustard	nucleus	24.7	36.24
Bra007276.1-P	Field mustard	nucleus	29.17	34.75
Bra016953.1-P	Field mustard	nucleus	27.38	34.46
Bra007274.1-P	Field mustard	nucleus	28.87	34.4
Bra004597.1-P	Field mustard	nucleus	28.57	34.16
GSMUA_Achr8P07740_001	Banana	nucleus	33.93	32.85
KRH37750	Soybean	nucleus	20.54	32.7
Bra017251.1-P	Field mustard	nucleus	36.9	31.31
Bra040260.1-P	Field mustard	nucleus	33.04	30.49
Os01t0859300-01	Rice	nucleus	28.87	30.03
TraesCS3D01G364900.1	Wheat	nucleus	34.52	29.74
Solyc09g009490.2.1	Tomato	nucleus	37.2	29.34
Bra005287.1-P	Field mustard	nucleus	38.1	29.22
PGSC0003DMT400006851	Potato	nucleus	37.2	29.21
TraesCS3B01G404600.1	Wheat	nucleus	33.63	29.2
TraesCS3B01G404300.1	Wheat	nucleus	33.93	29.16
GSMUA_Achr3P22710_001	Banana	nucleus	30.06	28.77
TraesCS3B01G404400.1	Wheat	nucleus	33.33	28.64
TraesCS3A01G371800.1	Wheat	nucleus	33.33	28.64
Bra022409.1-P	Field mustard	nucleus	30.06	28.53
TraesCS3B01G404200.1	Wheat	nucleus	33.04	28.46
Zm00001d012296_P001	Maize	nucleus	34.82	28.4
Bra018800.1-P	Field mustard	nucleus	30.65	27.99
KXG33733	Sorghum	nucleus	34.23	27.98
TraesCS3B01G404500.1	Wheat	nucleus	32.14	27.62
Bra001742.1-P	Field mustard	nucleus	28.87	27.32
TraesCS3A01G371900.3	Wheat	nucleus	30.36	26.7
Zm00001d042779_P001	Maize	nucleus	30.36	26.63
TraesCS3A01G372000.1	Wheat	nucleus	30.36	26.63
HORVU3Hr1G084360.2	Barley	nucleus	33.33	26.48
Bra037533.1-P	Field mustard	nucleus	30.36	26.29
TraesCS3D01G365500.1	Wheat	nucleus	29.76	26.11
TraesCS3A01G372200.1	Wheat	nucleus	29.17	25.65
TraesCS3A01G372100.2	Wheat	nucleus	29.46	25.32
TraesCS3D01G365000.1	Wheat	nucleus	29.46	25.0
Bra003253.1-P	Field mustard	plastid	27.68	23.08
Bra011485.1-P	Field mustard	nucleus	30.06	23.01
Bra033719.1-P	Field mustard	nucleus, plastid	16.96	21.43
Bra015281.1-P	Field mustard	nucleus, plastid	16.96	21.27
Bra033649.1-P	Field mustard	nucleus	25.3	20.53
KRH26633	Soybean	mitochondrion	39.29	20.5
Bra017621.1-P	Field mustard	cytosol	17.86	20.13

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	EnsemblPlantsGene:Bra019436	EnsemblPlants:Bra019436.1	EnsemblPlants:Bra019436.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0033613	GO:GO:0045893	InterPro:IPR004827	UniProt:M4DSE3
PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF119	SMART:SM00338
SUPFAM:SSF57959	UniParc:UPI000253F1C7	InterPro:bZIP	SEG:seg	:	:

Description

AT3G44460 (E=6e-117) DPBF2, AtbZIP67 | DPBF2; DNA binding / transcription activator/ transcription activator binding / transcription factor

Coordinates

chrA06:-:13763586..13765137

Molecular Weight (calculated)

37976.2 Da

IEP (calculated)

7.597

GRAVY (calculated)

-0.730

Length

336 amino acids

Sequence
(BLAST)

001: MHVHITRFIG LKTMPGPESE TSTFHVFNHD LQTQLQTYPQ ETAVEEHAPV GRQNSIMSLT LDEIQMKSGK SFGAMNMDEL LANMWMTVEE NNGGGAGAQQ
101: DGEKPTILPR QGSLSVPVPL CKKTVEEVWF EIQNGVQQPP PSSIAGQNPD EDNRRQQTLG EITLEDFLVK AGVVQEPLKT TMKMSSSDFG YNPEFGVGLH
201: CQTQNNYGDN RTVYNENRPF YSGMGESSSC MTGSGRSDQY LTGLNAFRIQ KRIIDGPPEI LMERRQRRMI KNRESAARSR ARRQAYTVEL ELELNQLTEE
301: NMKLKKIVVM NRSTQITKEK NGDKLRRIRR MASAGW

Best Arabidopsis Sequence Match ( AT3G44460.1 )
(BLAST)

001: MSVFESETSN FHVYNNHEIQ TQPQMQTFLS EEEPVGRQNS ILSLTLDEIQ MKSGKSFGAM NMDEFLANLW TTVEENDNEG GGAHNDGEKP AVLPRQGSLS
101: LPVPLCKKTV DEVWLEIQNG VQQHPPSSNS GQNSAENIRR QQTLGEITLE DFLVKAGVVQ EPLKTTMRMS SSDFGYNPEF GVGLHCQNQN NYGDNRSVYS
201: ENRPFYSVLG ESSSCMTGNG RSNQYLTGLD AFRIKKRIID GPPEILMERR QRRMIKNRES AARSRARRQA YTVELELELN NLTEENTKLK EIVEENEKKR
301: RQEIISRSKQ VTKEKSGDKL RKIRRMASAG W

Arabidopsis Description

DPBF2ABSCISIC ACID-INSENSITIVE 5-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RYD6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.