Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019436.1-P | Field mustard | nucleus | 96.24 | 99.11 |
| CDY08701 | Canola | nucleus | 95.95 | 95.95 |
| AT3G44460.1 | Thale cress | nucleus | 78.9 | 82.48 |
| KRH22688 | Soybean | nucleus | 39.6 | 40.77 |
| VIT_06s0080g00340.t01 | Wine grape | nucleus | 34.97 | 37.35 |
| CDX72108 | Canola | nucleus | 26.59 | 36.65 |
| CDY27189 | Canola | nucleus | 26.01 | 36.44 |
| CDY51261 | Canola | nucleus | 26.3 | 36.4 |
| CDY53679 | Canola | nucleus | 28.32 | 35.77 |
| CDY28083 | Canola | nucleus | 24.28 | 35.44 |
| CDY65560 | Canola | nucleus | 30.92 | 35.43 |
| CDX76014 | Canola | nucleus | 27.46 | 35.06 |
| CDX79959 | Canola | nucleus | 28.03 | 34.4 |
| CDY06946 | Canola | nucleus | 26.88 | 33.7 |
| CDX67659 | Canola | nucleus | 25.14 | 33.59 |
| CDY57581 | Canola | nucleus | 26.3 | 33.46 |
| GSMUA_Achr8P07740_001 | Banana | nucleus | 33.53 | 33.43 |
| CDY17109 | Canola | nucleus | 32.08 | 33.13 |
| CDX84141 | Canola | nucleus | 37.57 | 32.99 |
| CDY47381 | Canola | nucleus | 27.46 | 32.76 |
| KRH37750 | Soybean | nucleus | 19.94 | 32.7 |
| CDX75056 | Canola | nucleus | 37.57 | 32.58 |
| CDY43738 | Canola | nucleus | 37.28 | 31.93 |
| CDY51041 | Canola | nucleus | 30.06 | 31.52 |
| Os01t0859300-01 | Rice | nucleus | 28.9 | 30.96 |
| TraesCS3D01G364900.1 | Wheat | nucleus | 34.39 | 30.51 |
| Solyc09g009490.2.1 | Tomato | nucleus | 37.28 | 30.28 |
| PGSC0003DMT400006851 | Potato | nucleus | 37.28 | 30.14 |
| TraesCS3B01G404300.1 | Wheat | nucleus | 33.81 | 29.92 |
| CDY68227 | Canola | nucleus | 30.06 | 29.8 |
| TraesCS3B01G404600.1 | Wheat | nucleus | 32.95 | 29.46 |
| CDX69020 | Canola | nucleus | 29.77 | 29.43 |
| TraesCS3A01G371800.1 | Wheat | nucleus | 33.24 | 29.41 |
| GSMUA_Achr3P22710_001 | Banana | nucleus | 29.77 | 29.34 |
| CDY18575 | Canola | nucleus | 29.77 | 29.26 |
| TraesCS3B01G404200.1 | Wheat | nucleus | 32.95 | 29.23 |
| TraesCS3B01G404400.1 | Wheat | nucleus | 32.95 | 29.16 |
| CDX92320 | Canola | nucleus | 29.77 | 29.01 |
| Zm00001d012296_P001 | Maize | nucleus | 34.39 | 28.88 |
| CDY63041 | Canola | nucleus | 29.19 | 28.53 |
| CDX99242 | Canola | nucleus | 29.19 | 28.53 |
| KXG33733 | Sorghum | nucleus | 33.81 | 28.47 |
| TraesCS3B01G404500.1 | Wheat | nucleus | 32.08 | 28.39 |
| TraesCS3A01G371900.3 | Wheat | nucleus | 30.35 | 27.49 |
| TraesCS3A01G372000.1 | Wheat | nucleus | 30.35 | 27.42 |
| CDX82302 | Canola | nucleus | 28.61 | 27.2 |
| HORVU3Hr1G084360.2 | Barley | nucleus | 32.95 | 26.95 |
| TraesCS3D01G365500.1 | Wheat | nucleus | 29.77 | 26.89 |
| Zm00001d042779_P001 | Maize | nucleus | 29.77 | 26.89 |
| TraesCS3A01G372200.1 | Wheat | nucleus | 29.19 | 26.44 |
| CDY58256 | Canola | nucleus | 29.77 | 26.34 |
| TraesCS3A01G372100.2 | Wheat | nucleus | 29.48 | 26.09 |
| CDX72445 | Canola | nucleus | 30.64 | 25.85 |
| TraesCS3D01G365000.1 | Wheat | nucleus | 29.48 | 25.76 |
| CDY22311 | Canola | nucleus, plastid | 18.21 | 23.68 |
| CDY54481 | Canola | nucleus | 19.36 | 23.43 |
| CDY18197 | Canola | nucleus, plastid | 17.63 | 22.68 |
| CDX89852 | Canola | nucleus, plastid | 17.34 | 22.39 |
| CDX71528 | Canola | nucleus | 24.86 | 21.99 |
| CDY22378 | Canola | nucleus | 24.86 | 21.77 |
| KRH26633 | Soybean | mitochondrion | 39.31 | 21.12 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | GO:A0A078F7P7 | UniProt:A0A078F7P7 | EnsemblPlants:CDY10500 | ProteinID:CDY10500 |
| ProteinID:CDY10500.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00032443001 | InterPro:IPR004827 |
| PFAM:PF00170 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF119 | SMART:SM00338 |
| SUPFAM:SSF57959 | UniParc:UPI0004EDBEDC | InterPro:bZIP | SEG:seg | : | : |
Description
BnaCnng04010DBnaCnng04010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F7P7]
Coordinates
chrLK032003:-:894035..896222
Molecular Weight (calculated)
39240.7 Da
IEP (calculated)
8.078
GRAVY (calculated)
-0.809
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MHVHITRFIG LKTMPGPESE TSTFHVFNHD LQTQLQTYPQ ETAVEEHAPV GRQNSIMSLT LDEIQMKSGK SFGAMNMDEL LANMWMTVEE NNGGGAGAQQ
101: DGEKPTILPR QGSLSVPVPL CKKTVEEVWF EIQNGVQQPP PSSIAGQNPD EDNRRQQTLG EITLEDFLVK AGVVQEPLKT TMKISSSDFG YNPEFGVGLH
201: CQTQNNYGDN RTVYNENRPF YSGMGESSSC MTGNGRSGQY LTGLNAFRIQ KRIIDGPPEI LMERRQRRMI KNRESAARSR ARRQAYTVEL ELELNQLTEE
301: NMKLKKIVEE NDKKRRQEVM NRSTQITKEK NGDKLRRIRR MASAGW
101: DGEKPTILPR QGSLSVPVPL CKKTVEEVWF EIQNGVQQPP PSSIAGQNPD EDNRRQQTLG EITLEDFLVK AGVVQEPLKT TMKISSSDFG YNPEFGVGLH
201: CQTQNNYGDN RTVYNENRPF YSGMGESSSC MTGNGRSGQY LTGLNAFRIQ KRIIDGPPEI LMERRQRRMI KNRESAARSR ARRQAYTVEL ELELNQLTEE
301: NMKLKKIVEE NDKKRRQEVM NRSTQITKEK NGDKLRRIRR MASAGW
001: MSVFESETSN FHVYNNHEIQ TQPQMQTFLS EEEPVGRQNS ILSLTLDEIQ MKSGKSFGAM NMDEFLANLW TTVEENDNEG GGAHNDGEKP AVLPRQGSLS
101: LPVPLCKKTV DEVWLEIQNG VQQHPPSSNS GQNSAENIRR QQTLGEITLE DFLVKAGVVQ EPLKTTMRMS SSDFGYNPEF GVGLHCQNQN NYGDNRSVYS
201: ENRPFYSVLG ESSSCMTGNG RSNQYLTGLD AFRIKKRIID GPPEILMERR QRRMIKNRES AARSRARRQA YTVELELELN NLTEENTKLK EIVEENEKKR
301: RQEIISRSKQ VTKEKSGDKL RKIRRMASAG W
101: LPVPLCKKTV DEVWLEIQNG VQQHPPSSNS GQNSAENIRR QQTLGEITLE DFLVKAGVVQ EPLKTTMRMS SSDFGYNPEF GVGLHCQNQN NYGDNRSVYS
201: ENRPFYSVLG ESSSCMTGNG RSNQYLTGLD AFRIKKRIID GPPEILMERR QRRMIKNRES AARSRARRQA YTVELELELN NLTEENTKLK EIVEENEKKR
301: RQEIISRSKQ VTKEKSGDKL RKIRRMASAG W
Arabidopsis Description
DPBF2ABSCISIC ACID-INSENSITIVE 5-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RYD6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.