CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
EER89528
EER92642

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G44460.1	EER89528	AT1G13740.1	18484180
AT3G44460.1	EER92642	AT1G13740.1	18484180
AT3G44460.1	EER89528	AT1G69260.1	18484180
AT3G44460.1	EER92642	AT1G69260.1	18484180
AT3G44460.1	EER89528	AT3G02140.1	18484180
AT3G44460.1	EER92642	AT3G02140.1	18484180
AT3G44460.1	EER89528	AT3G29575.1	18484180
AT3G44460.1	EER92642	AT3G29575.1	18484180

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012296_P001	Maize	nucleus	86.13	85.92
Zm00001d042779_P001	Maize	nucleus	75.91	81.46
Os01t0859300-01	Rice	nucleus	53.53	68.11
TraesCS3D01G364900.1	Wheat	nucleus	60.1	63.33
TraesCS3B01G404600.1	Wheat	nucleus	58.88	62.53
TraesCS3A01G371800.1	Wheat	nucleus	58.88	61.89
TraesCS3B01G404200.1	Wheat	nucleus	58.15	61.28
TraesCS3B01G404300.1	Wheat	nucleus	57.91	60.87
TraesCS3B01G404500.1	Wheat	nucleus	57.18	60.1
TraesCS3B01G404400.1	Wheat	nucleus	56.69	59.59
TraesCS3A01G371900.3	Wheat	nucleus	54.01	58.12
TraesCS3D01G365500.1	Wheat	nucleus	54.01	57.96
TraesCS3A01G372200.1	Wheat	nucleus	53.28	57.33
TraesCS3A01G372000.1	Wheat	nucleus	53.28	57.18
TraesCS3D01G365000.1	Wheat	nucleus	54.74	56.82
HORVU3Hr1G084360.2	Barley	nucleus	57.66	56.03
TraesCS3A01G372100.2	Wheat	nucleus	53.28	56.01
GSMUA_Achr8P07740_001	Banana	nucleus	33.09	39.19
CDX75056	Canola	nucleus	36.74	37.84
CDX84141	Canola	nucleus	36.25	37.82
OQU78764	Sorghum	nucleus	28.22	37.18
GSMUA_Achr3P22710_001	Banana	nucleus	31.63	37.04
EER96850	Sorghum	nucleus	32.6	36.61
KXG19586	Sorghum	nucleus	30.9	36.49
EES07580	Sorghum	nucleus	30.66	36.42
EES03785	Sorghum	nucleus	28.95	35.74
EES18419	Sorghum	nucleus	27.98	35.49
KRG96191	Soybean	nucleus	33.33	35.4
OQU80633	Sorghum	nucleus	32.85	35.34
VIT_06s0080g00340.t01	Wine grape	nucleus	27.74	35.19
KRH22688	Soybean	nucleus	28.71	35.12
AT3G44460.1	Thale cress	nucleus	27.98	34.74
Bra017251.1-P	Field mustard	nucleus	33.33	34.6
KXG39483	Sorghum	nucleus	20.44	34.43
Bra019436.1-P	Field mustard	nucleus	27.98	34.23
CDY43738	Canola	nucleus	33.58	34.16
Bra005287.1-P	Field mustard	nucleus	36.25	34.02
CDY10500	Canola	nucleus	28.47	33.81
VIT_08s0007g03420.t01	Wine grape	nucleus	32.85	33.75
CDY08701	Canola	nucleus	28.22	33.53
EES03943	Sorghum	nucleus	21.17	33.21
PGSC0003DMT400006851	Potato	nucleus	34.06	32.71
Solyc09g009490.2.1	Tomato	nucleus	33.58	32.39
AT2G36270.3	Thale cress	nucleus	34.79	32.21
KRH32737	Soybean	nucleus	34.31	31.54
EES18296	Sorghum	nucleus, plastid	19.95	30.71
OQU90534	Sorghum	nucleus	23.11	29.87
KXG26981	Sorghum	nucleus	11.92	29.7
KRH20056	Soybean	nucleus	35.04	29.15
KRH37750	Soybean	nucleus	14.84	28.91
KRH26633	Soybean	mitochondrion	27.74	17.7

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	UniProt:A0A1B6Q731	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009409	GO:GO:0009414	GO:GO:0009628	GO:GO:0009651
GO:GO:0009719	GO:GO:0009737	GO:GO:0009987	GO:GO:0010152	GO:GO:0043565	InterPro:IPR004827
EnsemblPlants:KXG33733	ProteinID:KXG33733	ProteinID:KXG33733.1	PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217
PANTHER:PTHR22952	PANTHER:PTHR22952:SF187	SMART:SM00338	EnsemblPlantsGene:SORBI_3003G363400	SUPFAM:SSF57959	UniParc:UPI0003C6955C
InterPro:bZIP	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:68089024..68096305

Molecular Weight (calculated)

43418.7 Da

IEP (calculated)

6.385

GRAVY (calculated)

-0.487

Length

411 amino acids

Sequence
(BLAST)

001: MASDMSKNVR ALDEQEVTSQ QRAGRTSAAA TEEQDPLARQ SSIMSLTLEE LQNSLCEPGR NFGSMNMDEF MANIWNAEEF QAATGTGGCS KEGTEREPMM
101: MPVAAAAAGT GENGAGASGL VRQGSFALPP PLSRKTVEEV WAEINQDPAD SQANANATPQ AVVQPQMGSG GVGGVAGSGR QVTLGEMTLE DFLVKAGVVR
201: GAFAGHGGQA VGMVPAGPMG MQHAAAPMMY QVAAPVPHNA VYPVMGDGMG YHNGYPGGMA VVPPPPPSQC VAAAAVSPGS SDGMSAMTQA EMMNCIGNGG
301: MVRNGGGGGA RKRDSPEDGC TEKTVERRQR RMIKNRESAA RSRARKQAYT VELEAELNHL KEENERLRAE EKTILLSKKK MLVEKMMEQA RENVSAKKGG
401: RGLRRWGSAM W

Best Arabidopsis Sequence Match ( AT2G36270.1 )
(BLAST)

001: MVTRETKLTS EREVESSMAQ ARHNGGGGGE NHPFTSLGRQ SSIYSLTLDE FQHALCENGK NFGSMNMDEF LVSIWNAEEN NNNQQQAAAA AGSHSVPANH
101: NGFNNNNNNG GEGGVGVFSG GSRGNEDANN KRGIANESSL PRQGSLTLPA PLCRKTVDEV WSEIHRGGGS GNGGDSNGRS SSSNGQNNAQ NGGETAARQP
201: TFGEMTLEDF LVKAGVVREH PTNPKPNPNP NQNQNPSSVI PAAAQQQLYG VFQGTGDPSF PGQAMGVGDP SGYAKRTGGG GYQQAPPVQA GVCYGGGVGF
301: GAGGQQMGMV GPLSPVSSDG LGHGQVDNIG GQYGVDMGGL RGRKRVVDGP VEKVVERRQR RMIKNRESAA RSRARKQAYT VELEAELNQL KEENAQLKHA
401: LAELERKRKQ QYFESLKSRA QPKLPKSNGR LRTLMRNPSC PL

Arabidopsis Description

ABI5Basic-leucine zipper (bZIP) transcription factor family protein [Source:TAIR;Acc:AT2G36270]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.