Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d048085_P002 | Maize | nucleus | 77.41 | 77.61 |
| Solyc02g066850.1.1 | Tomato | cytosol | 10.15 | 60.61 |
| EER89528 | Sorghum | nucleus | 48.98 | 54.06 |
| Solyc06g083290.1.1 | Tomato | cytosol, extracellular, plastid | 8.12 | 47.06 |
| Os03t0214200-01 | Rice | nucleus | 45.18 | 44.39 |
| Bra027018.1-P | Field mustard | cytosol | 6.6 | 44.07 |
| HORVU4Hr1G035770.1 | Barley | plastid | 11.68 | 41.44 |
| AT3G29575.1 | Thale cress | nucleus | 24.11 | 41.13 |
| CDY00093 | Canola | nucleus | 25.63 | 39.76 |
| Bra036210.1-P | Field mustard | nucleus | 25.63 | 39.61 |
| CDY19988 | Canola | nucleus | 25.63 | 39.61 |
| KXG39123 | Sorghum | nucleus | 30.46 | 38.46 |
| CDY36406 | Canola | nucleus | 28.17 | 38.01 |
| CDY44386 | Canola | nucleus | 24.11 | 37.85 |
| CDY04085 | Canola | nucleus | 23.86 | 37.75 |
| GSMUA_Achr4P14370_001 | Banana | nucleus | 31.73 | 37.31 |
| GSMUA_Achr3P30390_001 | Banana | nucleus | 31.22 | 37.16 |
| CDX85274 | Canola | nucleus | 24.62 | 36.6 |
| CDY16104 | Canola | nucleus | 28.68 | 36.57 |
| Bra025400.1-P | Field mustard | nucleus | 24.62 | 36.33 |
| CDX86364 | Canola | nucleus | 24.62 | 36.33 |
| PGSC0003DMT400036544 | Potato | cytosol | 11.68 | 36.22 |
| Bra026891.1-P | Field mustard | nucleus | 27.92 | 35.6 |
| CDY33807 | Canola | nucleus | 27.92 | 35.6 |
| TraesCS3B01G594200.1 | Wheat | cytosol | 19.8 | 34.51 |
| Solyc02g032680.1.1 | Tomato | cytosol | 10.41 | 34.17 |
| TraesCS3D01G532000.1 | Wheat | nucleus | 14.72 | 34.12 |
| Bra019706.1-P | Field mustard | nucleus | 27.16 | 33.86 |
| CDX98125 | Canola | nucleus | 27.16 | 33.54 |
| EER99676 | Sorghum | nucleus | 28.93 | 33.33 |
| PGSC0003DMT400089614 | Potato | cytosol | 11.42 | 33.09 |
| Bra033105.1-P | Field mustard | nucleus | 18.27 | 33.03 |
| TraesCS4D01G246400.1 | Wheat | nucleus | 32.23 | 32.07 |
| HORVU4Hr1G067930.1 | Barley | nucleus | 32.74 | 31.93 |
| Solyc02g032710.1.1 | Tomato | cytosol | 10.91 | 31.85 |
| PGSC0003DMT400003712 | Potato | nucleus | 25.38 | 31.85 |
| Solyc02g066870.1.1 | Tomato | cytosol | 12.69 | 31.85 |
| TraesCS4A01G058100.1 | Wheat | nucleus | 19.54 | 31.3 |
| GSMUA_Achr3P15940_001 | Banana | nucleus | 27.66 | 31.23 |
| Bra004004.1-P | Field mustard | nucleus | 27.41 | 31.21 |
| GSMUA_Achr7P26660_001 | Banana | nucleus | 27.92 | 31.16 |
| CDY07354 | Canola | nucleus | 27.41 | 31.12 |
| TraesCS4B01G247000.1 | Wheat | nucleus | 31.22 | 31.06 |
| Solyc02g088910.2.1 | Tomato | nucleus | 24.87 | 30.91 |
| VIT_01s0011g00410.t01 | Wine grape | nucleus | 28.17 | 30.83 |
| Solyc02g066860.1.1 | Tomato | cytosol | 10.15 | 30.77 |
| AT1G13740.1 | Thale cress | nucleus | 27.16 | 30.75 |
| GSMUA_Achr6P27430_001 | Banana | nucleus | 27.66 | 30.7 |
| Solyc02g032140.1.1 | Tomato | cytosol | 9.64 | 30.65 |
| CDY04272 | Canola | nucleus | 26.9 | 30.64 |
| TraesCS4B01G246800.1 | Wheat | nucleus | 18.53 | 30.17 |
| AT1G69260.1 | Thale cress | nucleus | 26.4 | 30.14 |
| CDX74273 | Canola | mitochondrion | 20.81 | 30.04 |
| Solyc02g030610.1.1 | Tomato | cytosol | 12.18 | 30.0 |
| CDY68672 | Canola | cytosol, mitochondrion, nucleus, plastid | 20.81 | 29.71 |
| Bra039157.1-P | Field mustard | cytosol | 20.81 | 29.6 |
| Solyc02g030650.1.1 | Tomato | nucleus | 13.45 | 29.44 |
| Bra001031.1-P | Field mustard | mitochondrion | 20.05 | 28.94 |
| CDY43256 | Canola | mitochondrion | 20.3 | 28.57 |
| KRH75067 | Soybean | nucleus | 29.44 | 28.5 |
| KRH70923 | Soybean | nucleus | 29.7 | 28.47 |
| CDX91976 | Canola | mitochondrion | 20.56 | 28.42 |
| Bra004368.1-P | Field mustard | nucleus | 23.35 | 28.22 |
| Solyc02g032690.1.1 | Tomato | cytosol | 17.01 | 27.92 |
| PGSC0003DMT400045906 | Potato | nucleus | 27.41 | 27.84 |
| CDX95951 | Canola | nucleus | 23.6 | 27.68 |
| Solyc04g005380.2.1 | Tomato | nucleus | 26.9 | 27.6 |
| PGSC0003DMT400095238 | Potato | cytosol, mitochondrion | 8.88 | 27.56 |
| CDY40905 | Canola | nucleus | 24.37 | 27.51 |
| VIT_14s0068g00300.t01 | Wine grape | nucleus | 26.9 | 27.39 |
| KRH01286 | Soybean | nucleus | 25.89 | 27.06 |
| GSMUA_Achr9P07070_001 | Banana | mitochondrion | 29.19 | 27.0 |
| PGSC0003DMT400072760 | Potato | nucleus | 27.41 | 26.28 |
| KRH54707 | Soybean | nucleus | 16.5 | 26.1 |
| KRH45047 | Soybean | nucleus | 25.13 | 25.85 |
| TraesCS4D01G246100.2 | Wheat | nucleus | 16.24 | 25.5 |
| TraesCS4A01G057800.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 32.99 | 25.44 |
| Solyc01g058740.2.1 | Tomato | cytosol | 4.57 | 25.35 |
| KRH63223 | Soybean | nucleus | 16.24 | 24.62 |
| Solyc02g030630.1.1 | Tomato | cytosol | 19.04 | 24.51 |
| AT3G02140.1 | Thale cress | cytosol | 19.29 | 23.82 |
| Solyc02g032670.1.1 | Tomato | cytosol | 15.74 | 23.66 |
| Solyc05g012210.2.1 | Tomato | extracellular, golgi | 27.66 | 23.54 |
| PGSC0003DMT400051959 | Potato | nucleus | 15.23 | 23.35 |
| Solyc02g030620.1.1 | Tomato | cytosol | 16.75 | 22.3 |
| Bra040367.1-P | Field mustard | nucleus | 15.74 | 22.22 |
| Solyc02g066900.1.1 | Tomato | cytosol | 17.77 | 22.08 |
| CDY08008 | Canola | cytosol | 15.74 | 21.6 |
| Bra001242.1-P | Field mustard | nucleus | 15.74 | 21.53 |
| CDY34910 | Canola | peroxisome | 15.23 | 21.51 |
| Solyc02g066840.1.1 | Tomato | cytosol | 8.12 | 21.33 |
| KRH66123 | Soybean | nucleus | 19.04 | 21.19 |
| CDX74054 | Canola | nucleus | 15.48 | 21.18 |
| Solyc02g066890.1.1 | Tomato | cytosol | 19.04 | 20.89 |
| VIT_00s0216g00060.t01 | Wine grape | nucleus | 17.77 | 19.55 |
| KRH56804 | Soybean | nucleus | 13.96 | 19.5 |
| AT3G07255.1 | Thale cress | nucleus | 14.47 | 19.45 |
| KRH07456 | Soybean | nucleus | 17.01 | 19.14 |
| KRH03141 | Soybean | nucleus | 10.66 | 17.87 |
| Solyc02g032720.1.1 | Tomato | cytosol | 16.5 | 17.57 |
| PGSC0003DMT400091590 | Potato | cytosol | 15.99 | 15.44 |
| PGSC0003DMT400036545 | Potato | nucleus | 18.27 | 14.72 |
| Solyc02g030600.1.1 | Tomato | cytosol | 7.61 | 14.35 |
| VIT_17s0000g05280.t01 | Wine grape | nucleus | 15.23 | 14.05 |
Protein Annotations
| MapMan:15.5.53.3 | EntrezGene:8085306 | UniProt:C5WSS9 | ncoils:Coil | EnsemblPlants:EER92642 | ProteinID:EER92642 |
| ProteinID:EER92642.1 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | InterPro:Jas |
| InterPro:NINJA_B | InterPro:Ninja_fam | InterPro:Ninja_motif | PFAM:PF07897 | PFAM:PF16135 | PFAM:PF16136 |
| PANTHER:PTHR31413 | PANTHER:PTHR31413:SF5 | EnsemblPlantsGene:SORBI_3001G456400 | unigene:Sbi.20708 | UniParc:UPI0001A82872 | RefSeq:XP_002465644.1 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:73271045..73274411
Molecular Weight (calculated)
41588.3 Da
IEP (calculated)
9.229
GRAVY (calculated)
-0.501
Length
394 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGFSRDLLC GIGKGDAPPP EQRPGQLREE MEAVELSLGL SLGGRFGLDR KGDKLPRSSS VAAMLTPPVE VPTPRALPRT SSLPVLAEAS EVAKQQGLAG
101: WGSCRDGGGL GVEHAARLPA SGSPSSASSG GDGQRLQGTL MRTSSLPAAI EAAGNDEWKK RKEAQSLKRL EVKKKRIERR NSHTCNTSKE AAGQIPEEMN
201: AHTDKLVASD EAVVMNNENH SSGKHLVKGL PPKYQATIAS QDSLSTVGKK PNSAFKAIVE EHSPSSSIPS SGEAISSVTA ASPPSSSLAH RTATLGPAGD
301: QSILGRAASR ANSMGDVERK MMQEMPGVFT KGLPNGNRVE GFLYKYRKGE DVRIVCICHG SFLTPSEFVE HAGAGKVDNP LRHIVVNPTP TPNL
101: WGSCRDGGGL GVEHAARLPA SGSPSSASSG GDGQRLQGTL MRTSSLPAAI EAAGNDEWKK RKEAQSLKRL EVKKKRIERR NSHTCNTSKE AAGQIPEEMN
201: AHTDKLVASD EAVVMNNENH SSGKHLVKGL PPKYQATIAS QDSLSTVGKK PNSAFKAIVE EHSPSSSIPS SGEAISSVTA ASPPSSSLAH RTATLGPAGD
301: QSILGRAASR ANSMGDVERK MMQEMPGVFT KGLPNGNRVE GFLYKYRKGE DVRIVCICHG SFLTPSEFVE HAGAGKVDNP LRHIVVNPTP TPNL
001: MGEASRQQRA WNREMTVTTN LSLDIDKYPR DLLRGFMSEN GGGRVFHGGE TNCDDESTIE LNLGLSLGGR FGVDKTPRKL KRSSSVLDTV PFNDSTVAEP
101: ENYTVGLERT TSLPAEMEEE WRKRKEMQSL RRMEAKRRRC EKQSFRVGNS DDQTVSFENE RWVTASKSGF LQRHLVSSNR QVCGVDSDGG GATGGGSSSS
201: LSELDNKNQQ GSSNSCNDER SPKIVAGCSS NSGSQGTERP SVTRANKVNE NENEKRVRSE DSVDRKGKGM ATSTGLVDMP CVFTKGDGPN GRRVDGILYK
301: YGKGEEVRIM CICHGSFLTP AEFVKHGGGG DVDRPLRHIV VNTSSSTF
101: ENYTVGLERT TSLPAEMEEE WRKRKEMQSL RRMEAKRRRC EKQSFRVGNS DDQTVSFENE RWVTASKSGF LQRHLVSSNR QVCGVDSDGG GATGGGSSSS
201: LSELDNKNQQ GSSNSCNDER SPKIVAGCSS NSGSQGTERP SVTRANKVNE NENEKRVRSE DSVDRKGKGM ATSTGLVDMP CVFTKGDGPN GRRVDGILYK
301: YGKGEEVRIM CICHGSFLTP AEFVKHGGGG DVDRPLRHIV VNTSSSTF
Arabidopsis Description
AFP2AFP2 [Source:UniProtKB/TrEMBL;Acc:A0A178WBB1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.