Factsheet for Solyc02g066840.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g058740.2.1
Solyc02g030600.1.1
Solyc02g030610.1.1
Solyc02g030620.1.1
Solyc02g030630.1.1
Solyc02g030650.1.1
Solyc02g032670.1.1
Solyc02g032680.1.1
Solyc02g032690.1.1
Solyc02g032710.1.1
Solyc02g032720.1.1
Solyc02g066840.1.1
Solyc02g066850.1.1
Solyc02g066860.1.1
Solyc02g066870.1.1
Solyc02g066890.1.1
Solyc02g066900.1.1
Solyc02g088910.2.1
Solyc04g005380.2.1
Solyc05g012210.2.1
Solyc09g009490.2.1
Solyc10g076920.1.1
Solyc10g081350.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G02140.1	Solyc04g005380.2.1	AT1G13740.1	18484180
AT3G02140.1	Solyc05g012210.2.1	AT1G13740.1	18484180
AT3G02140.1	Solyc04g005380.2.1	AT1G69260.1	18484180
AT3G02140.1	Solyc05g012210.2.1	AT1G69260.1	18484180
AT3G02140.1	Solyc01g058740.2.1	AT3G02140.1	18484180
AT3G02140.1	Solyc02g030600.1.1	AT3G02140.1	18484180
AT3G02140.1	Solyc02g030610.1.1	AT3G02140.1	18484180
AT3G02140.1	Solyc02g030620.1.1	AT3G02140.1	18484180
AT3G02140.1	Solyc02g030630.1.1	AT3G02140.1	18484180
AT3G02140.1	Solyc02g030650.1.1	AT3G02140.1	18484180
AT3G02140.1	Solyc02g032670.1.1	AT3G02140.1	18484180
AT3G02140.1	Solyc02g032680.1.1	AT3G02140.1	18484180
AT3G02140.1	Solyc02g032690.1.1	AT3G02140.1	18484180
AT3G02140.1	Solyc02g032710.1.1	AT3G02140.1	18484180
AT3G02140.1	Solyc02g032720.1.1	AT3G02140.1	18484180
AT3G02140.1	Solyc02g066840.1.1	AT3G02140.1	18484180
AT3G02140.1	Solyc02g066850.1.1	AT3G02140.1	18484180
AT3G02140.1	Solyc02g066860.1.1	AT3G02140.1	18484180
AT3G02140.1	Solyc02g066870.1.1	AT3G02140.1	18484180
AT3G02140.1	Solyc02g066890.1.1	AT3G02140.1	18484180
AT3G02140.1	Solyc02g066900.1.1	AT3G02140.1	18484180
AT3G02140.1	Solyc02g088910.2.1	AT3G02140.1	18484180
AT3G02140.1	Solyc09g009490.2.1	AT3G44460.1	18484180
AT3G02140.1	Solyc10g076920.1.1	AT3G56850.1	18484180
AT3G02140.1	Solyc10g081350.1.1	AT3G56850.1	18484180
AT3G29575.1	Solyc04g005380.2.1	AT1G13740.1	18484180
AT3G29575.1	Solyc05g012210.2.1	AT1G13740.1	18484180
AT3G29575.1	Solyc04g005380.2.1	AT1G69260.1	18484180
AT3G29575.1	Solyc05g012210.2.1	AT1G69260.1	18484180
AT3G29575.1	Solyc01g058740.2.1	AT3G29575.1	18484180
AT3G29575.1	Solyc02g030600.1.1	AT3G29575.1	18484180
AT3G29575.1	Solyc02g030610.1.1	AT3G29575.1	18484180
AT3G29575.1	Solyc02g030620.1.1	AT3G29575.1	18484180
AT3G29575.1	Solyc02g030630.1.1	AT3G29575.1	18484180
AT3G29575.1	Solyc02g030650.1.1	AT3G29575.1	18484180
AT3G29575.1	Solyc02g032670.1.1	AT3G29575.1	18484180
AT3G29575.1	Solyc02g032680.1.1	AT3G29575.1	18484180
AT3G29575.1	Solyc02g032690.1.1	AT3G29575.1	18484180
AT3G29575.1	Solyc02g032710.1.1	AT3G29575.1	18484180
AT3G29575.1	Solyc02g032720.1.1	AT3G29575.1	18484180
AT3G29575.1	Solyc02g066840.1.1	AT3G29575.1	18484180
AT3G29575.1	Solyc02g066850.1.1	AT3G29575.1	18484180
AT3G29575.1	Solyc02g066860.1.1	AT3G29575.1	18484180
AT3G29575.1	Solyc02g066870.1.1	AT3G29575.1	18484180
AT3G29575.1	Solyc02g066890.1.1	AT3G29575.1	18484180
AT3G29575.1	Solyc02g066900.1.1	AT3G29575.1	18484180
AT3G29575.1	Solyc02g088910.2.1	AT3G29575.1	18484180
AT3G29575.1	Solyc09g009490.2.1	AT3G44460.1	18484180
AT3G29575.1	Solyc10g076920.1.1	AT3G56850.1	18484180
AT3G29575.1	Solyc10g081350.1.1	AT3G56850.1	18484180
AT3G29575.1	Solyc10g076920.1.1	AT3G56850.1	21798944
AT3G29575.1	Solyc10g081350.1.1	AT3G56850.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g030600.1.1	Tomato	cytosol	56.67	40.67
Solyc02g066900.1.1	Tomato	cytosol	50.0	23.66
Solyc02g066890.1.1	Tomato	cytosol	50.67	21.17
Solyc02g030630.1.1	Tomato	cytosol	40.67	19.93
Solyc02g032710.1.1	Tomato	cytosol	12.0	13.33
AT3G29575.1	Thale cress	nucleus	20.0	12.99
Solyc02g066870.1.1	Tomato	cytosol	13.33	12.74
CDY00093	Canola	nucleus	20.67	12.2
Bra036210.1-P	Field mustard	nucleus	20.67	12.16
CDY19988	Canola	nucleus	20.67	12.16
CDY04085	Canola	nucleus	20.0	12.05
CDY44386	Canola	nucleus	19.33	11.55
Bra033105.1-P	Field mustard	nucleus	16.67	11.47
CDX85274	Canola	nucleus	20.0	11.32
CDX86364	Canola	nucleus	20.0	11.24
Bra025400.1-P	Field mustard	nucleus	20.0	11.24
CDX91976	Canola	mitochondrion	21.33	11.23
Solyc02g032690.1.1	Tomato	cytosol	17.33	10.83
Bra039157.1-P	Field mustard	cytosol	19.33	10.47
GSMUA_Achr4P32830_001	Banana	nucleus	9.33	10.29
Solyc06g083290.1.1	Tomato	cytosol, extracellular, plastid	4.67	10.29
Bra001031.1-P	Field mustard	mitochondrion	18.67	10.26
CDX74273	Canola	mitochondrion	18.67	10.26
CDY68672	Canola	cytosol, mitochondrion, nucleus, plastid	18.67	10.14
Solyc02g032680.1.1	Tomato	cytosol	8.0	10.0
CDY43256	Canola	mitochondrion	18.0	9.64
Solyc02g088910.2.1	Tomato	nucleus	20.0	9.46
GSMUA_Achr9P09330_001	Banana	nucleus	20.67	9.17
EER89528	Sorghum	nucleus	20.67	8.68
KRH01286	Soybean	nucleus	21.33	8.49
Solyc02g032670.1.1	Tomato	cytosol	14.67	8.4
VIT_14s0068g00300.t01	Wine grape	nucleus	21.33	8.27
Solyc02g030610.1.1	Tomato	cytosol	8.67	8.12
EER92642	Sorghum	nucleus	21.33	8.12
HORVU4Hr1G035770.1	Barley	plastid	6.0	8.11
Solyc02g030620.1.1	Tomato	cytosol	16.0	8.11
KRH45047	Soybean	nucleus	20.67	8.09
Os03t0214200-01	Rice	nucleus	21.33	7.98
Solyc02g030650.1.1	Tomato	nucleus	9.33	7.78
Solyc02g066860.1.1	Tomato	cytosol	6.67	7.69
TraesCS3D01G532000.1	Wheat	nucleus	8.67	7.65
Solyc04g005380.2.1	Tomato	nucleus	19.33	7.55
AT3G02140.1	Thale cress	cytosol	16.0	7.52
Zm00001d048085_P002	Maize	nucleus	19.33	7.38
GSMUA_Achr5P01470_001	Banana	nucleus	14.0	7.32
Solyc01g058740.2.1	Tomato	cytosol	3.33	7.04
TraesCS4B01G246800.1	Wheat	nucleus	11.33	7.02
HORVU4Hr1G067930.1	Barley	nucleus	18.67	6.93
TraesCS3B01G594200.1	Wheat	cytosol	10.0	6.64
TraesCS4D01G246400.1	Wheat	nucleus	17.33	6.57
TraesCS4A01G058100.1	Wheat	nucleus	10.67	6.5
TraesCS4D01G246100.2	Wheat	nucleus	10.67	6.37
GSMUA_Achr6P34980_001	Banana	cytosol	12.0	6.36
TraesCS4B01G247000.1	Wheat	nucleus	16.67	6.31
Solyc05g012210.2.1	Tomato	extracellular, golgi	19.33	6.26
TraesCS4A01G057800.1	Wheat	cytosol, mitochondrion, nucleus, plastid	18.67	5.48
Solyc02g032140.1.1	Tomato	cytosol	4.0	4.84
Solyc02g066850.1.1	Tomato	cytosol	2.0	4.55
Solyc02g032720.1.1	Tomato	cytosol	10.67	4.32

Protein Annotations

EnsemblPlants:Solyc02g066840.1.1	EnsemblPlantsGene:Solyc02g066840.1	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987
InterPro:Ninja_fam	PANTHER:PTHR31413	PANTHER:PTHR31413:SF10	UniParc:UPI0002768DFD	UniProt:K4B716	MapMan:35.2

Description

No Description!

Coordinates

chr2:+:37060549..37061001

Molecular Weight (calculated)

18301.8 Da

IEP (calculated)

4.510

GRAVY (calculated)

-1.051

Length

150 amino acids

Sequence
(BLAST)

001: MEKANHQDKG KRIVEDVSVD LTLGLPMETQ MEYWRQMNLL PPMETEMEWR QQNYPFSVTR TSSLPRDTEI EWRQRLEAEI TWRRPMDAEI EWRKRLEAEM
101: DWRQRMETEI ECRLRMETEM EWRQINGPIS VMRTTSMPPM ETQTEFGANE

Best Arabidopsis Sequence Match ( AT3G22170.1 )
(BLAST)

001: MDIDLRLHSG DLCKGDDEDR GLDNVLHNEE DMDIGKIEDV SVEVNTDDSV GMGVPTGELV EYTEGMNLEP LNGMEFESHG EAYSFYQEYS RAMGFNTAIQ
101: NSRRSKTTRE FIDAKFACSR YGTKREYDKS FNRPRARQSK QDPENMAGRR TCAKTDCKAS MHVKRRPDGK WVIHSFVREH NHELLPAQAV SEQTRKIYAA
201: MAKQFAEYKT VISLKSDSKS SFEKGRTLSV ETGDFKILLD FLSRMQSLNS NFFYAVDLGD DQRVKNVFWV DAKSRHNYGS FCDVVSLDTT YVRNKYKMPL
301: AIFVGVNQHY QYMVLGCALI SDESAATYSW LMETWLRAIG GQAPKVLITE LDVVMNSIVP EIFPNTRHCL FLWHVLMKVS ENLGQVVKQH DNFMPKFEKC
401: IYKSGKDEDF ARKWYKNLAR FGLKDDQWMI SLYEDRKKWA PTYMTDVLLA GMSTSQRADS INAFFDKYMH KKTSVQEFVK VYDTVLQDRC EEEAKADSEM
501: WNKQPAMKSP SPFEKSVSEV YTPAVFKKFQ IEVLGAIACS PREENRDATC STFRVQDFEN NQDFMVTWNQ TKAEVSCICR LFEYKGYLCR HTLNVLQCCH
601: LSSIPSQYIL KRWTKDAKSR HFSGEPQQLQ TRLLRYNDLC ERALKLNEEA SLSQESYNIA FLAIEGAIGN CAGINTSGRS LPDVVTSPTQ GLISVEEDNH
701: SRSAGKTSKK KNPTKKRKVN PEQDVMPVAA PESLQQMDKL SPRTVGIESY YGTQQSVQGM VQLNLMGPTR DNFYGNQQTM QGLRQLNSIA PSYDSYYGPQ
801: QGIHGQGVDF FRPANFSYDI RDDPNVRTTQ LHEDASRHS

Arabidopsis Description

FHY3FHY3 [Source:UniProtKB/TrEMBL;Acc:A0A178VJL5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.