Skip to main content
crop-pal logo
Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • peroxisome 1
  • mitochondrion 2
  • plastid 1
  • cytosol 2
  • plasma membrane 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc02g066850.1.1 Tomato cytosol 10.97 66.67
Bra027018.1-P Field mustard cytosol 7.98 54.24
Solyc06g083290.1.1 Tomato cytosol, extracellular, plastid 8.98 52.94
AT3G29575.1 Thale cress nucleus 26.43 45.89
EER92642 Sorghum nucleus 44.39 45.18
HORVU4Hr1G035770.1 Barley plastid 11.97 43.24
Zm00001d048085_P002 Maize nucleus 41.9 42.75
CDY00093 Canola nucleus 26.93 42.52
GSMUA_Achr3P30390_001 Banana nucleus 34.66 41.99
Bra036210.1-P Field mustard nucleus 26.68 41.96
CDY19988 Canola nucleus 26.68 41.96
CDY04085 Canola nucleus 25.19 40.56
GSMUA_Achr4P14370_001 Banana nucleus 33.42 40.0
CDX85274 Canola nucleus 26.18 39.62
TraesCS3D01G532000.1 Wheat nucleus 16.71 39.41
TraesCS3B01G594200.1 Wheat cytosol 22.19 39.38
Bra025400.1-P Field mustard nucleus 26.18 39.33
CDX86364 Canola nucleus 26.18 39.33
CDY44386 Canola nucleus 24.44 39.04
EER89528 Sorghum nucleus 34.41 38.66
PGSC0003DMT400036544 Potato cytosol 12.22 38.58
Os07t0602900-01 Rice nucleus 30.67 38.56
GSMUA_Achr7P26660_001 Banana nucleus 33.92 38.53
CDY16104 Canola nucleus 29.18 37.86
Os03t0419100-01 Rice nucleus 28.93 37.78
Bra026891.1-P Field mustard nucleus 28.93 37.54
CDY33807 Canola nucleus 28.93 37.54
TraesCS4D01G246400.1 Wheat nucleus 36.91 37.37
TraesCS4B01G247000.1 Wheat nucleus 36.66 37.12
Solyc02g032680.1.1 Tomato cytosol 10.97 36.67
PGSC0003DMT400003712 Potato nucleus 27.93 35.67
CDY36406 Canola nucleus 25.94 35.62
GSMUA_Achr6P27430_001 Banana nucleus 31.42 35.49
HORVU4Hr1G067930.1 Barley nucleus 35.66 35.4
CDX74273 Canola mitochondrion 23.94 35.16
TraesCS4B01G246800.1 Wheat nucleus 21.2 35.12
Solyc02g088910.2.1 Tomato nucleus 27.68 35.02
Solyc02g032710.1.1 Tomato cytosol 11.72 34.81
GSMUA_Achr3P15940_001 Banana nucleus 30.17 34.67
Bra019706.1-P Field mustard nucleus 27.18 34.49
Solyc02g066870.1.1 Tomato cytosol 13.47 34.39
Bra001031.1-P Field mustard mitochondrion 23.19 34.07
CDX98125 Canola nucleus 26.93 33.86
Solyc02g066860.1.1 Tomato cytosol 10.97 33.85
PGSC0003DMT400089614 Potato cytosol 11.47 33.82
CDY04272 Canola nucleus 28.68 33.24
Solyc02g030650.1.1 Tomato nucleus 14.71 32.78
VIT_01s0011g00410.t01 Wine grape nucleus 29.43 32.78
AT1G13740.1 Thale cress nucleus 28.43 32.76
CDY40905 Canola nucleus 28.43 32.66
Bra033105.1-P Field mustard nucleus 17.71 32.57
CDY07354 Canola nucleus 27.93 32.28
Solyc02g032140.1.1 Tomato cytosol 9.98 32.26
Bra004004.1-P Field mustard nucleus 27.68 32.08
Bra004368.1-P Field mustard nucleus 25.94 31.9
KRH01286 Soybean nucleus 29.68 31.57
KRH45047 Soybean nucleus 29.93 31.33
TraesCS4A01G058100.1 Wheat nucleus 19.2 31.3
CDX91976 Canola mitochondrion 22.19 31.23
TraesCS4D01G246100.2 Wheat nucleus 19.45 31.08
CDY68672 Canola cytosol, mitochondrion, nucleus, plastid 21.2 30.8
AT1G69260.1 Thale cress nucleus 26.43 30.72
Bra039157.1-P Field mustard cytosol 21.2 30.69
CDX95951 Canola nucleus 25.69 30.65
Solyc02g032690.1.1 Tomato cytosol 17.96 30.0
KRH75067 Soybean nucleus 29.93 29.48
KRH70923 Soybean nucleus 30.17 29.44
PGSC0003DMT400072760 Potato nucleus 30.17 29.44
Solyc02g030610.1.1 Tomato cytosol 11.72 29.38
CDY43256 Canola mitochondrion 20.45 29.29
PGSC0003DMT400095238 Potato cytosol, mitochondrion 9.23 29.13
TraesCS4A01G057800.1 Wheat cytosol, mitochondrion, nucleus, plastid 36.91 28.96
Solyc04g005380.2.1 Tomato nucleus 27.68 28.91
GSMUA_Achr9P07070_001 Banana mitochondrion 30.67 28.87
PGSC0003DMT400045906 Potato nucleus 27.93 28.87
VIT_14s0068g00300.t01 Wine grape nucleus 27.43 28.42
Solyc02g032670.1.1 Tomato cytosol 18.2 27.86
KRH54707 Soybean nucleus 17.21 27.71
Solyc02g030630.1.1 Tomato cytosol 19.45 25.49
AT3G02140.1 Thale cress cytosol 20.2 25.39
KRH63223 Soybean nucleus 16.46 25.38
Solyc02g030620.1.1 Tomato cytosol 18.2 24.66
Solyc05g012210.2.1 Tomato extracellular, golgi 27.93 24.19
Solyc02g066900.1.1 Tomato cytosol 18.7 23.66
Bra001242.1-P Field mustard nucleus 16.71 23.26
CDX74054 Canola nucleus 16.71 23.26
CDY08008 Canola cytosol 16.46 23.0
PGSC0003DMT400051959 Potato nucleus 14.46 22.57
Solyc01g058740.2.1 Tomato cytosol 3.99 22.54
Solyc02g066890.1.1 Tomato cytosol 19.95 22.28
KRH56804 Soybean nucleus 15.21 21.63
Bra040367.1-P Field mustard nucleus 14.96 21.51
CDY34910 Canola peroxisome 14.96 21.51
Solyc02g066840.1.1 Tomato cytosol 7.98 21.33
KRH66123 Soybean nucleus 18.7 21.19
KRH07456 Soybean nucleus 17.96 20.57
AT3G07255.1 Thale cress nucleus 14.96 20.48
KRH03141 Soybean nucleus 11.72 20.0
VIT_00s0216g00060.t01 Wine grape nucleus 17.71 19.83
Solyc02g032720.1.1 Tomato cytosol 16.71 18.11
PGSC0003DMT400091590 Potato cytosol 17.46 17.16
PGSC0003DMT400036545 Potato nucleus 18.95 15.54
Solyc02g030600.1.1 Tomato cytosol 7.73 14.83
VIT_17s0000g05280.t01 Wine grape nucleus 15.21 14.29
Protein Annotations
MapMan:15.5.53.3EntrezGene:9268873ProteinID:ABF94628.1EMBL:AK100623ProteinID:BAF11284.1ProteinID:BAH92041.1
ProteinID:BAS82953.1ncoils:CoilGO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0007154GO:GO:0007165GO:GO:0008150
GO:GO:0009987InterPro:JasInterPro:NINJA_BInterPro:Ninja_famInterPro:Ninja_motifEnsemblPlantsGene:Os03g0214200
EnsemblPlants:Os03t0214200-01PFAM:PF07897PFAM:PF16135PFAM:PF16136PANTHER:PTHR31413PANTHER:PTHR31413:SF5
UniProt:Q10Q07UniParc:UPI0000DB452ARefSeq:XP_015632992.1SEG:seg::
Description
Mediator of OsbZIP46 deactivation and degradationMediator of OsbZIP46 deactivation and degradation, Negative regulation of ABA signaling and drought tolerance (Os03t0214200-01);Similar to Ninja-family protein 1. (Os03t0214200-02)
Coordinates
chr3:-:5983514..5988740
Molecular Weight (calculated)
42646.8 Da
IEP (calculated)
9.501
GRAVY (calculated)
-0.493
Length
401 amino acids
Sequence
(BLAST)
001: MEGFSRDLLC GIGKGGDGPR GEVRPRVDME AEEVELNLGL SLGGRFGLDR RGEKLARSSS VAAILAAPTE PSAPPSGLFR TSSLPTVAAA EAAKKQGVDE
101: LNCRRPSGGA EAEPAAARLP ASGSPSSGSS DGEGRRLEVN MTDTLMRTSS LPAGIEDEWR KRKEAQSLKR LEVKRKRIER RNSLTSNISK EAVGQILEEM
201: NAGAEKVESC DDVATGNKKT GGNVNHSSDR NRCTGLPPVH RATYTQQRGS LSGIPTKHIP AMKGSADAEE HNVPSAATEH RNGAAIATPP FSALAVRAVA
301: LASRGEQLRA TGRVAARAKS MGDVERIMMQ EMPCVCTKGL PNGKRVEGFL YKYRKGEEVR IVCVCHGSFL TPAEFVKHAG GGDVANPLRH IVVNPIPPSL
401: Y
Best Arabidopsis Sequence Match ( AT1G13740.1 )
(BLAST)
001: MGEASRQQRA WNREMTVTTN LSLDIDKYPR DLLRGFMSEN GGGRVFHGGE TNCDDESTIE LNLGLSLGGR FGVDKTPRKL KRSSSVLDTV PFNDSTVAEP
101: ENYTVGLERT TSLPAEMEEE WRKRKEMQSL RRMEAKRRRC EKQSFRVGNS DDQTVSFENE RWVTASKSGF LQRHLVSSNR QVCGVDSDGG GATGGGSSSS
201: LSELDNKNQQ GSSNSCNDER SPKIVAGCSS NSGSQGTERP SVTRANKVNE NENEKRVRSE DSVDRKGKGM ATSTGLVDMP CVFTKGDGPN GRRVDGILYK
301: YGKGEEVRIM CICHGSFLTP AEFVKHGGGG DVDRPLRHIV VNTSSSTF
Arabidopsis Description
AFP2AFP2 [Source:UniProtKB/TrEMBL;Acc:A0A178WBB1]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.