Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027018.1-P | Field mustard | cytosol | 10.57 | 62.71 |
| KRH66123 | Soybean | nucleus | 53.71 | 53.11 |
| Solyc06g083290.1.1 | Tomato | cytosol, extracellular, plastid | 10.0 | 51.47 |
| GSMUA_Achr4P32830_001 | Banana | nucleus | 14.0 | 36.03 |
| HORVU4Hr1G035770.1 | Barley | plastid | 10.0 | 31.53 |
| Bra040367.1-P | Field mustard | nucleus | 22.57 | 28.32 |
| CDY34910 | Canola | peroxisome | 22.29 | 27.96 |
| CDY08008 | Canola | cytosol | 22.0 | 26.83 |
| TraesCS3D01G532000.1 | Wheat | nucleus | 12.86 | 26.47 |
| Bra001242.1-P | Field mustard | nucleus | 21.43 | 26.04 |
| CDX74054 | Canola | nucleus | 21.43 | 26.04 |
| PGSC0003DMT400051959 | Potato | nucleus | 18.57 | 25.29 |
| AT3G07255.1 | Thale cress | nucleus | 20.86 | 24.91 |
| TraesCS4B01G246800.1 | Wheat | nucleus | 17.14 | 24.79 |
| TraesCS3B01G594200.1 | Wheat | cytosol | 15.71 | 24.34 |
| GSMUA_Achr5P01470_001 | Banana | nucleus | 19.71 | 24.04 |
| GSMUA_Achr9P09330_001 | Banana | nucleus | 23.14 | 23.96 |
| GSMUA_Achr6P34980_001 | Banana | cytosol | 18.86 | 23.32 |
| VIT_00s0216g00060.t01 | Wine grape | nucleus | 23.14 | 22.63 |
| KRH70923 | Soybean | nucleus | 26.0 | 22.14 |
| KRH63223 | Soybean | nucleus | 16.0 | 21.54 |
| TraesCS4D01G246100.2 | Wheat | nucleus | 15.43 | 21.51 |
| TraesCS4A01G058100.1 | Wheat | nucleus | 14.86 | 21.14 |
| KRH75067 | Soybean | nucleus | 24.29 | 20.88 |
| KRH54707 | Soybean | nucleus | 14.57 | 20.48 |
| KRH01286 | Soybean | nucleus | 22.0 | 20.42 |
| KRH45047 | Soybean | nucleus | 21.14 | 19.32 |
| KRH03141 | Soybean | nucleus | 12.57 | 18.72 |
| Os03t0214200-01 | Rice | nucleus | 20.57 | 17.96 |
| KRH56804 | Soybean | nucleus | 14.29 | 17.73 |
| Zm00001d048085_P002 | Maize | nucleus | 19.71 | 17.56 |
| EER89528 | Sorghum | nucleus | 17.43 | 17.09 |
| EER92642 | Sorghum | nucleus | 19.14 | 17.01 |
| TraesCS4D01G246400.1 | Wheat | nucleus | 18.86 | 16.67 |
| TraesCS4B01G247000.1 | Wheat | nucleus | 18.0 | 15.91 |
| HORVU4Hr1G067930.1 | Barley | nucleus | 16.86 | 14.6 |
| TraesCS4A01G057800.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 18.29 | 12.52 |
Protein Annotations
| EMBL:ACUP02010007 | EnsemblPlants:KRH07456 | EnsemblPlantsGene:GLYMA_16G090500 | EntrezGene:100809595 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009987 | InterPro:Jas | InterPro:Ninja_fam | InterPro:Ninja_motif | PANTHER:PTHR31413 |
| PANTHER:PTHR31413:SF11 | PFAM:PF07897 | PFAM:PF16135 | ProteinID:KRH07456 | ProteinID:KRH07456.1 | SEG:seg |
| UniParc:UPI000233B1BF | UniProt:I1MMB5 | MapMan:15.5.53.3 | : | : | : |
Description
hypothetical protein
Coordinates
chr16:+:13050854..13053833
Molecular Weight (calculated)
38241.7 Da
IEP (calculated)
7.943
GRAVY (calculated)
-0.777
Length
350 amino acids
Sequence
(BLAST)
(BLAST)
001: MVEVEEIELD LALSIGGSFG KYTVEKPAPD SEARVSNSDS RDGMRVVMEP REKREIQAFR RMEARKKRER LREPSEPESQ LRDFKREKTE CGNGVSGSWT
101: AATTTPYRMH QFATVQYLPL NNGFPLPCWV GGEKNVGGVD GVDGINGGGD RKAKSNGSSR CSSSVVSDYQ SSSREEGGST DSHSHSVHSL AEPAQLNTSK
201: EISIGTSQPE ESASASSHPI RPKQGNTTIQ EIKKHIAKET RPKPNPNSPE PIENKPLSNE NLTKVEIMGK PPKPLSHTSY SLPPMPYVST KGDNGRTVNG
301: FLYRYTKSEV SIICVCHGST FSPAEFVQHA GGTDTTHPLR QITVIPSVFG
101: AATTTPYRMH QFATVQYLPL NNGFPLPCWV GGEKNVGGVD GVDGINGGGD RKAKSNGSSR CSSSVVSDYQ SSSREEGGST DSHSHSVHSL AEPAQLNTSK
201: EISIGTSQPE ESASASSHPI RPKQGNTTIQ EIKKHIAKET RPKPNPNSPE PIENKPLSNE NLTKVEIMGK PPKPLSHTSY SLPPMPYVST KGDNGRTVNG
301: FLYRYTKSEV SIICVCHGST FSPAEFVQHA GGTDTTHPLR QITVIPSVFG
001: MFVESLSMAE KFVEDENVEV ELELELCLSL GGPFKKTEKS KTFGQSNAVG FEKDNGVNLD GRTTNVTRIK ETRKKREAKQ QQRSGEEGEC KRIRTEYNGV
101: SNGDDMDLSS INMCNGYGSG RLKESSKDVT IGSPICTSSS VSDPSSSSRQ EGGSGDIGAQ SGQTKQVRSP VNNILTGTEQ TVHNTDGSKD AETQEWSNSS
201: VTKESGKPPK PHTNSNGNGS LLPFAQMPCV TSTGNGPEGK TVNGFLYRYS KSEISIICVC HGTSFSPAEF IVHAGGTNVS HPLRHITVVP STL
101: SNGDDMDLSS INMCNGYGSG RLKESSKDVT IGSPICTSSS VSDPSSSSRQ EGGSGDIGAQ SGQTKQVRSP VNNILTGTEQ TVHNTDGSKD AETQEWSNSS
201: VTKESGKPPK PHTNSNGNGS LLPFAQMPCV TSTGNGPEGK TVNGFLYRYS KSEISIICVC HGTSFSPAEF IVHAGGTNVS HPLRHITVVP STL
Arabidopsis Description
Nuclear transport factor 2/RNA recognition motif protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNF2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.