Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g066850.1.1 | Tomato | cytosol | 9.24 | 50.0 |
| EER92642 | Sorghum | nucleus | 54.06 | 48.98 |
| Solyc06g083290.1.1 | Tomato | cytosol, extracellular, plastid | 8.12 | 42.65 |
| Bra027018.1-P | Field mustard | cytosol | 6.44 | 38.98 |
| Bra036210.1-P | Field mustard | nucleus | 26.05 | 36.47 |
| CDY19988 | Canola | nucleus | 26.05 | 36.47 |
| AT3G29575.1 | Thale cress | nucleus | 23.53 | 36.36 |
| CDY00093 | Canola | nucleus | 25.77 | 36.22 |
| HORVU4Hr1G035770.1 | Barley | plastid | 11.2 | 36.04 |
| Solyc02g032680.1.1 | Tomato | cytosol | 11.76 | 35.0 |
| CDX85274 | Canola | nucleus | 25.77 | 34.72 |
| Os03t0214200-01 | Rice | nucleus | 38.66 | 34.41 |
| KXG39123 | Sorghum | nucleus | 29.97 | 34.29 |
| GSMUA_Achr3P30390_001 | Banana | nucleus | 31.65 | 34.14 |
| CDY44386 | Canola | nucleus | 23.81 | 33.86 |
| CDY04085 | Canola | nucleus | 23.53 | 33.73 |
| Bra025400.1-P | Field mustard | nucleus | 25.21 | 33.71 |
| CDX86364 | Canola | nucleus | 25.21 | 33.71 |
| PGSC0003DMT400036544 | Potato | cytosol | 11.76 | 33.07 |
| CDY16104 | Canola | nucleus | 27.45 | 31.72 |
| PGSC0003DMT400089614 | Potato | cytosol | 12.04 | 31.62 |
| Bra026891.1-P | Field mustard | nucleus | 27.17 | 31.39 |
| CDY33807 | Canola | nucleus | 27.17 | 31.39 |
| CDY36406 | Canola | nucleus | 25.49 | 31.16 |
| GSMUA_Achr4P14370_001 | Banana | nucleus | 28.57 | 30.45 |
| Solyc02g032710.1.1 | Tomato | cytosol | 11.48 | 30.37 |
| TraesCS4D01G246100.2 | Wheat | nucleus | 21.29 | 30.28 |
| Bra033105.1-P | Field mustard | nucleus | 18.49 | 30.28 |
| Bra019706.1-P | Field mustard | nucleus | 26.61 | 30.06 |
| Solyc02g066860.1.1 | Tomato | cytosol | 10.92 | 30.0 |
| PGSC0003DMT400003712 | Potato | nucleus | 26.33 | 29.94 |
| PGSC0003DMT400095238 | Potato | cytosol, mitochondrion | 10.64 | 29.92 |
| GSMUA_Achr3P15940_001 | Banana | nucleus | 28.85 | 29.51 |
| TraesCS3B01G594200.1 | Wheat | cytosol | 18.49 | 29.2 |
| CDX98125 | Canola | nucleus | 26.05 | 29.15 |
| GSMUA_Achr6P27430_001 | Banana | nucleus | 28.85 | 29.01 |
| GSMUA_Achr7P26660_001 | Banana | nucleus | 28.57 | 28.9 |
| Solyc02g066870.1.1 | Tomato | cytosol | 12.61 | 28.66 |
| TraesCS3D01G532000.1 | Wheat | nucleus | 13.45 | 28.24 |
| Solyc02g032140.1.1 | Tomato | cytosol | 9.8 | 28.23 |
| HORVU4Hr1G067930.1 | Barley | nucleus | 31.93 | 28.22 |
| Solyc02g088910.2.1 | Tomato | nucleus | 24.93 | 28.08 |
| EER99676 | Sorghum | nucleus | 26.89 | 28.07 |
| TraesCS4A01G058100.1 | Wheat | nucleus | 19.33 | 28.05 |
| VIT_01s0011g00410.t01 | Wine grape | nucleus | 27.73 | 27.5 |
| Bra004004.1-P | Field mustard | nucleus | 26.61 | 27.46 |
| CDY07354 | Canola | nucleus | 26.61 | 27.38 |
| AT1G13740.1 | Thale cress | nucleus | 26.61 | 27.3 |
| KRH75067 | Soybean | nucleus | 31.09 | 27.27 |
| KRH70923 | Soybean | nucleus | 31.37 | 27.25 |
| Solyc02g030650.1.1 | Tomato | nucleus | 13.73 | 27.22 |
| CDY04272 | Canola | nucleus | 26.05 | 26.88 |
| Solyc02g030610.1.1 | Tomato | cytosol | 12.04 | 26.88 |
| TraesCS4B01G246800.1 | Wheat | nucleus | 18.21 | 26.86 |
| Bra004368.1-P | Field mustard | nucleus | 24.37 | 26.69 |
| Solyc02g032690.1.1 | Tomato | cytosol | 17.93 | 26.67 |
| TraesCS4B01G247000.1 | Wheat | nucleus | 29.41 | 26.52 |
| TraesCS4D01G246400.1 | Wheat | nucleus | 28.85 | 26.01 |
| CDX95951 | Canola | nucleus | 24.37 | 25.89 |
| PGSC0003DMT400045906 | Potato | nucleus | 28.01 | 25.77 |
| KRH01286 | Soybean | nucleus | 27.17 | 25.73 |
| KRH45047 | Soybean | nucleus | 27.17 | 25.33 |
| CDX74273 | Canola | mitochondrion | 19.33 | 25.27 |
| AT1G69260.1 | Thale cress | nucleus | 24.37 | 25.22 |
| VIT_14s0068g00300.t01 | Wine grape | nucleus | 26.89 | 24.81 |
| Solyc04g005380.2.1 | Tomato | nucleus | 26.61 | 24.74 |
| PGSC0003DMT400072760 | Potato | nucleus | 28.29 | 24.57 |
| CDX91976 | Canola | mitochondrion | 19.33 | 24.21 |
| Bra001031.1-P | Field mustard | mitochondrion | 18.49 | 24.18 |
| KRH54707 | Soybean | nucleus | 16.81 | 24.1 |
| Solyc01g058740.2.1 | Tomato | cytosol | 4.76 | 23.94 |
| CDY68672 | Canola | cytosol, mitochondrion, nucleus, plastid | 18.49 | 23.91 |
| Bra039157.1-P | Field mustard | cytosol | 18.49 | 23.83 |
| CDY40905 | Canola | nucleus | 22.97 | 23.5 |
| GSMUA_Achr9P07070_001 | Banana | mitochondrion | 27.73 | 23.24 |
| PGSC0003DMT400051959 | Potato | nucleus | 16.53 | 22.96 |
| CDY43256 | Canola | mitochondrion | 17.93 | 22.86 |
| Solyc02g032670.1.1 | Tomato | cytosol | 16.53 | 22.52 |
| KRH63223 | Soybean | nucleus | 16.25 | 22.31 |
| Solyc02g066900.1.1 | Tomato | cytosol | 19.61 | 22.08 |
| Solyc02g030630.1.1 | Tomato | cytosol | 18.77 | 21.9 |
| Solyc05g012210.2.1 | Tomato | extracellular, golgi | 28.01 | 21.6 |
| TraesCS4A01G057800.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 30.25 | 21.14 |
| AT3G02140.1 | Thale cress | cytosol | 18.77 | 21.0 |
| Solyc02g030620.1.1 | Tomato | cytosol | 17.37 | 20.95 |
| Solyc02g066840.1.1 | Tomato | cytosol | 8.68 | 20.67 |
| CDY34910 | Canola | peroxisome | 15.97 | 20.43 |
| Bra040367.1-P | Field mustard | nucleus | 15.41 | 19.71 |
| KRH66123 | Soybean | nucleus | 19.33 | 19.49 |
| Solyc02g066890.1.1 | Tomato | cytosol | 19.33 | 19.22 |
| CDY08008 | Canola | cytosol | 15.41 | 19.16 |
| Bra001242.1-P | Field mustard | nucleus | 15.13 | 18.75 |
| CDX74054 | Canola | nucleus | 15.13 | 18.75 |
| KRH56804 | Soybean | nucleus | 14.29 | 18.09 |
| KRH07456 | Soybean | nucleus | 17.09 | 17.43 |
| VIT_00s0216g00060.t01 | Wine grape | nucleus | 17.37 | 17.32 |
| AT3G07255.1 | Thale cress | nucleus | 14.01 | 17.06 |
| KRH03141 | Soybean | nucleus | 10.92 | 16.6 |
| Solyc02g032720.1.1 | Tomato | cytosol | 16.25 | 15.68 |
| PGSC0003DMT400036545 | Potato | nucleus | 19.89 | 14.52 |
| Solyc02g030600.1.1 | Tomato | cytosol | 8.12 | 13.88 |
| VIT_17s0000g05280.t01 | Wine grape | nucleus | 16.53 | 13.82 |
| PGSC0003DMT400091590 | Potato | cytosol | 15.69 | 13.73 |
Protein Annotations
| MapMan:15.5.53.3 | EntrezGene:8065726 | UniProt:C5Z7X0 | ncoils:Coil | EnsemblPlants:EER89528 | ProteinID:EER89528 |
| ProteinID:EER89528.1 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | InterPro:Jas |
| InterPro:NINJA_B | InterPro:Ninja_fam | InterPro:Ninja_motif | PFAM:PF07897 | PFAM:PF16135 | PFAM:PF16136 |
| PANTHER:PTHR31413 | PANTHER:PTHR31413:SF5 | EnsemblPlantsGene:SORBI_3010G102900 | UniParc:UPI0001A899AF | RefSeq:XP_002438161.1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr10:-:9648400..9651243
Molecular Weight (calculated)
38216.4 Da
IEP (calculated)
10.362
GRAVY (calculated)
-0.667
Length
357 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGFSRDFLR GIGKGDAPPP EQRPGQPREA MEEDVELSLE LSLGGLFGPA RKRDKDKLPR PSSAAAMMTP VDVPAPPAHP RASGSPSSAS PEGDGQRFLG
101: SGTLMRTSSL PAVTEAAGNE EWKKRKEAQS LRRLEVKKKR IERRNSLTCS TSKEVTRQIP EKMNAHTDKL ASCDEAVVGN NENHSSGKHL AKGKAPKHQA
201: AITSQASLSA MRKKPNSAFK GKAVTKENKS SSSVPSGEAT SSVTAASPPP PSSLAPRRAA ALGSRGDGRA AVPQVQIPWG NVERRLMQEM PGVLTKGLPN
301: KVDGFLYKYR EGDDMRIVCL CHGSFLTPSE FVQHAGAVNG EAANPLQYIF INPTPNL
101: SGTLMRTSSL PAVTEAAGNE EWKKRKEAQS LRRLEVKKKR IERRNSLTCS TSKEVTRQIP EKMNAHTDKL ASCDEAVVGN NENHSSGKHL AKGKAPKHQA
201: AITSQASLSA MRKKPNSAFK GKAVTKENKS SSSVPSGEAT SSVTAASPPP PSSLAPRRAA ALGSRGDGRA AVPQVQIPWG NVERRLMQEM PGVLTKGLPN
301: KVDGFLYKYR EGDDMRIVCL CHGSFLTPSE FVQHAGAVNG EAANPLQYIF INPTPNL
001: MGEASRQQRA WNREMTVTTN LSLDIDKYPR DLLRGFMSEN GGGRVFHGGE TNCDDESTIE LNLGLSLGGR FGVDKTPRKL KRSSSVLDTV PFNDSTVAEP
101: ENYTVGLERT TSLPAEMEEE WRKRKEMQSL RRMEAKRRRC EKQSFRVGNS DDQTVSFENE RWVTASKSGF LQRHLVSSNR QVCGVDSDGG GATGGGSSSS
201: LSELDNKNQQ GSSNSCNDER SPKIVAGCSS NSGSQGTERP SVTRANKVNE NENEKRVRSE DSVDRKGKGM ATSTGLVDMP CVFTKGDGPN GRRVDGILYK
301: YGKGEEVRIM CICHGSFLTP AEFVKHGGGG DVDRPLRHIV VNTSSSTF
101: ENYTVGLERT TSLPAEMEEE WRKRKEMQSL RRMEAKRRRC EKQSFRVGNS DDQTVSFENE RWVTASKSGF LQRHLVSSNR QVCGVDSDGG GATGGGSSSS
201: LSELDNKNQQ GSSNSCNDER SPKIVAGCSS NSGSQGTERP SVTRANKVNE NENEKRVRSE DSVDRKGKGM ATSTGLVDMP CVFTKGDGPN GRRVDGILYK
301: YGKGEEVRIM CICHGSFLTP AEFVKHGGGG DVDRPLRHIV VNTSSSTF
Arabidopsis Description
AFP2AFP2 [Source:UniProtKB/TrEMBL;Acc:A0A178WBB1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.