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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus, plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Solyc01g058740.2.1
Solyc02g030600.1.1
Solyc02g030610.1.1
Solyc02g030620.1.1
Solyc02g030630.1.1
Solyc02g030650.1.1
Solyc02g032670.1.1
Solyc02g032680.1.1
Solyc02g032690.1.1
Solyc02g032710.1.1
Solyc02g032720.1.1
Solyc02g066840.1.1
Solyc02g066850.1.1
Solyc02g066860.1.1
Solyc02g066870.1.1
Solyc02g066890.1.1
Solyc02g066900.1.1
Solyc02g088910.2.1
Solyc04g005380.2.1
Solyc05g012210.2.1
Solyc09g009490.2.1
Solyc10g076920.1.1
Solyc10g081350.1.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G02140.1 Solyc04g005380.2.1 AT1G13740.1 18484180
AT3G02140.1 Solyc05g012210.2.1 AT1G13740.1 18484180
AT3G02140.1 Solyc04g005380.2.1 AT1G69260.1 18484180
AT3G02140.1 Solyc05g012210.2.1 AT1G69260.1 18484180
AT3G02140.1 Solyc01g058740.2.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g030600.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g030610.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g030620.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g030630.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g030650.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g032670.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g032680.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g032690.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g032710.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g032720.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g066840.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g066850.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g066860.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g066870.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g066890.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g066900.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g088910.2.1 AT3G02140.1 18484180
AT3G02140.1 Solyc09g009490.2.1 AT3G44460.1 18484180
AT3G02140.1 Solyc10g076920.1.1 AT3G56850.1 18484180
AT3G02140.1 Solyc10g081350.1.1 AT3G56850.1 18484180
AT3G29575.1 Solyc04g005380.2.1 AT1G13740.1 18484180
AT3G29575.1 Solyc05g012210.2.1 AT1G13740.1 18484180
AT3G29575.1 Solyc04g005380.2.1 AT1G69260.1 18484180
AT3G29575.1 Solyc05g012210.2.1 AT1G69260.1 18484180
AT3G29575.1 Solyc01g058740.2.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g030600.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g030610.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g030620.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g030630.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g030650.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g032670.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g032680.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g032690.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g032710.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g032720.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g066840.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g066850.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g066860.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g066870.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g066890.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g066900.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g088910.2.1 AT3G29575.1 18484180
AT3G29575.1 Solyc09g009490.2.1 AT3G44460.1 18484180
AT3G29575.1 Solyc10g076920.1.1 AT3G56850.1 18484180
AT3G29575.1 Solyc10g081350.1.1 AT3G56850.1 18484180
AT3G29575.1 Solyc10g076920.1.1 AT3G56850.1 21798944
AT3G29575.1 Solyc10g081350.1.1 AT3G56850.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc02g066850.1.1 Tomato cytosol 18.61 89.39
Solyc02g066890.1.1 Tomato cytosol 68.77 60.72
Solyc06g083290.1.1 Tomato cytosol, extracellular, plastid 11.36 52.94
Solyc02g066840.1.1 Tomato cytosol 23.66 50.0
Solyc02g032680.1.1 Tomato cytosol 16.72 44.17
Solyc02g030600.1.1 Tomato cytosol 28.71 43.54
Solyc02g030650.1.1 Tomato nucleus 24.61 43.33
Solyc02g030630.1.1 Tomato cytosol 39.12 40.52
GSMUA_Achr4P32830_001 Banana nucleus 17.03 39.71
Solyc02g032710.1.1 Tomato cytosol 16.4 38.52
Solyc02g032670.1.1 Tomato cytosol 31.55 38.17
Solyc02g032690.1.1 Tomato cytosol 28.08 37.08
Solyc02g066860.1.1 Tomato cytosol 15.14 36.92
Solyc02g066870.1.1 Tomato cytosol 17.03 34.39
HORVU4Hr1G035770.1 Barley plastid 11.36 32.43
Solyc02g030610.1.1 Tomato cytosol 15.77 31.25
Solyc02g032720.1.1 Tomato cytosol 36.28 31.08
AT3G29575.1 Thale cress nucleus 22.4 30.74
Solyc02g032140.1.1 Tomato cytosol 11.99 30.65
Solyc02g030620.1.1 Tomato cytosol 27.76 29.73
Solyc01g058740.2.1 Tomato cytosol 6.62 29.58
CDY19988 Canola nucleus 22.08 27.45
Bra036210.1-P Field mustard nucleus 22.08 27.45
CDY00093 Canola nucleus 21.77 27.17
TraesCS3D01G532000.1 Wheat nucleus 14.51 27.06
CDY04085 Canola nucleus 21.14 26.91
CDX85274 Canola nucleus 21.77 26.04
CDY44386 Canola nucleus 20.5 25.9
Bra025400.1-P Field mustard nucleus 21.45 25.47
CDX86364 Canola nucleus 21.45 25.47
CDX91976 Canola mitochondrion 21.14 23.51
CDX74273 Canola mitochondrion 20.19 23.44
TraesCS4B01G246800.1 Wheat nucleus 17.67 23.14
GSMUA_Achr9P09330_001 Banana nucleus 24.29 22.78
Bra001031.1-P Field mustard mitochondrion 19.56 22.71
Solyc02g088910.2.1 Tomato nucleus 22.4 22.4
Bra039157.1-P Field mustard cytosol 19.56 22.38
GSMUA_Achr5P01470_001 Banana nucleus 20.19 22.3
GSMUA_Achr6P34980_001 Banana cytosol 19.56 21.91
CDY68672 Canola cytosol, mitochondrion, nucleus, plastid 18.93 21.74
TraesCS3B01G594200.1 Wheat cytosol 15.14 21.24
KRH45047 Soybean nucleus 24.61 20.37
TraesCS4A01G058100.1 Wheat nucleus 15.77 20.33
KRH01286 Soybean nucleus 23.97 20.16
CDY43256 Canola mitochondrion 17.67 20.0
TraesCS4D01G246100.2 Wheat nucleus 15.77 19.92
VIT_14s0068g00300.t01 Wine grape nucleus 24.29 19.9
Bra033105.1-P Field mustard nucleus 13.56 19.72
EER89528 Sorghum nucleus 22.08 19.61
Os03t0214200-01 Rice nucleus 23.66 18.7
AT3G02140.1 Thale cress cytosol 18.3 18.18
EER92642 Sorghum nucleus 22.08 17.77
Zm00001d048085_P002 Maize nucleus 21.77 17.56
Solyc04g005380.2.1 Tomato nucleus 20.5 16.93
HORVU4Hr1G067930.1 Barley nucleus 19.87 15.59
Solyc05g012210.2.1 Tomato extracellular, golgi 22.71 15.55
TraesCS4D01G246400.1 Wheat nucleus 18.93 15.15
TraesCS4B01G247000.1 Wheat nucleus 18.61 14.9
TraesCS4A01G057800.1 Wheat cytosol, mitochondrion, nucleus, plastid 18.93 11.74
Protein Annotations
EnsemblPlants:Solyc02g066900.1.1EnsemblPlantsGene:Solyc02g066900.1GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009987
InterPro:JasInterPro:Ninja_famPANTHER:PTHR31413PANTHER:PTHR31413:SF10PFAM:PF16135UniParc:UPI0002768FEB
UniProt:K4B722MapMan:15.5.53.3::::
Description
No Description!
Coordinates
chr2:+:37130326..37131517
Molecular Weight (calculated)
36600.6 Da
IEP (calculated)
5.226
GRAVY (calculated)
-0.820
Length
317 amino acids
Sequence
(BLAST)
001: MEKANHQDKG KKIVEDVSVD LTLDLPMETQ MEYWRQRNLL PPMDTEMEWR QQNYPFSVTG MSSLLRDTEI EWRQRLEAEM AWRRRMDTEI ESRKRLEAEM
101: DWRRRMETEI ECRRRMETDM EWRQISGPFS VTRAASMPPM ETQTEWGEMS DPFSVNRTAS LPPMETGMDF KERRDLQTQT RGDTQQNRWD KLKNVIVVEE
201: NEGASGSSNV IPPVSGTLEQ MQHLVLAAIE ATNEKSPDFS RKEGLRNFLL KMPGVSTKGD GPNGKKTGGF LYAYKRGGEV KIVCICHGYF LTPAEFVKHA
301: GGGDVENPLR LITVDPN
Best Arabidopsis Sequence Match ( AT3G29575.3 )
(BLAST)
001: MSKKQRLSEE DGEVEIELDL GLSLNGRFGV DPLAKTRLMR STSVLDLVVN DRSGLSRTCS LPVETEEEWR KRKELQSLRR LEAKRKRSEK QRKHKACGGE
101: EKVVEEGSIG SSGSGSSGLS EVDTLLPPVQ ATTNKSVETS PSSAQSQPEN LGKEASQNII EDMPFVSTTG DGPNGKKING FLYRYRKGEE VRIVCVCHGS
201: FLSPAEFVKH AGGGDVAHPL KHIVVNPSPF L
Arabidopsis Description
AFP3Ninja-family protein AFP3 [Source:UniProtKB/Swiss-Prot;Acc:Q94F39]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.