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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • extracellular 1
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, extracellular, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:extracellular
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Solyc01g058740.2.1
Solyc02g030600.1.1
Solyc02g030610.1.1
Solyc02g030620.1.1
Solyc02g030630.1.1
Solyc02g030650.1.1
Solyc02g032670.1.1
Solyc02g032680.1.1
Solyc02g032690.1.1
Solyc02g032710.1.1
Solyc02g032720.1.1
Solyc02g066840.1.1
Solyc02g066850.1.1
Solyc02g066860.1.1
Solyc02g066870.1.1
Solyc02g066890.1.1
Solyc02g066900.1.1
Solyc02g088910.2.1
Solyc04g005380.2.1
Solyc05g012210.2.1
Solyc09g009490.2.1
Solyc10g076920.1.1
Solyc10g081350.1.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G02140.1 Solyc04g005380.2.1 AT1G13740.1 18484180
AT3G02140.1 Solyc05g012210.2.1 AT1G13740.1 18484180
AT3G02140.1 Solyc04g005380.2.1 AT1G69260.1 18484180
AT3G02140.1 Solyc05g012210.2.1 AT1G69260.1 18484180
AT3G02140.1 Solyc01g058740.2.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g030600.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g030610.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g030620.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g030630.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g030650.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g032670.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g032680.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g032690.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g032710.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g032720.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g066840.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g066850.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g066860.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g066870.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g066890.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g066900.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g088910.2.1 AT3G02140.1 18484180
AT3G02140.1 Solyc09g009490.2.1 AT3G44460.1 18484180
AT3G02140.1 Solyc10g076920.1.1 AT3G56850.1 18484180
AT3G02140.1 Solyc10g081350.1.1 AT3G56850.1 18484180
AT3G29575.1 Solyc04g005380.2.1 AT1G13740.1 18484180
AT3G29575.1 Solyc05g012210.2.1 AT1G13740.1 18484180
AT3G29575.1 Solyc04g005380.2.1 AT1G69260.1 18484180
AT3G29575.1 Solyc05g012210.2.1 AT1G69260.1 18484180
AT3G29575.1 Solyc01g058740.2.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g030600.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g030610.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g030620.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g030630.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g030650.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g032670.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g032680.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g032690.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g032710.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g032720.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g066840.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g066850.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g066860.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g066870.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g066890.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g066900.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g088910.2.1 AT3G29575.1 18484180
AT3G29575.1 Solyc09g009490.2.1 AT3G44460.1 18484180
AT3G29575.1 Solyc10g076920.1.1 AT3G56850.1 18484180
AT3G29575.1 Solyc10g081350.1.1 AT3G56850.1 18484180
AT3G29575.1 Solyc10g076920.1.1 AT3G56850.1 21798944
AT3G29575.1 Solyc10g081350.1.1 AT3G56850.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc02g032710.1.1 Tomato cytosol 78.34 91.11
PGSC0003DMT400089614 Potato cytosol 65.61 75.74
Solyc02g066850.1.1 Tomato cytosol 21.66 51.52
Solyc06g083290.1.1 Tomato cytosol, extracellular, plastid 18.47 42.65
Solyc02g032680.1.1 Tomato cytosol 28.66 37.5
Solyc02g066860.1.1 Tomato cytosol 30.57 36.92
Solyc02g030610.1.1 Tomato cytosol 31.21 30.62
GSMUA_Achr4P32830_001 Banana nucleus 24.2 27.94
HORVU4Hr1G035770.1 Barley plastid 19.11 27.03
Solyc02g030650.1.1 Tomato nucleus 29.94 26.11
AT3G29575.1 Thale cress nucleus 35.67 24.24
TraesCS3D01G532000.1 Wheat nucleus 25.48 23.53
Solyc02g032140.1.1 Tomato cytosol 18.47 23.39
CDY44386 Canola nucleus 35.67 22.31
CDY04085 Canola nucleus 34.39 21.69
Solyc01g058740.2.1 Tomato cytosol 9.55 21.13
CDY00093 Canola nucleus 33.76 20.87
CDY19988 Canola nucleus 33.76 20.78
Bra036210.1-P Field mustard nucleus 33.76 20.78
CDX85274 Canola nucleus 33.76 20.0
Bra025400.1-P Field mustard nucleus 33.76 19.85
CDX86364 Canola nucleus 33.76 19.85
Solyc02g032690.1.1 Tomato cytosol 29.94 19.58
Solyc02g030630.1.1 Tomato cytosol 35.67 18.3
Solyc02g088910.2.1 Tomato nucleus 36.31 17.98
TraesCS3B01G594200.1 Wheat cytosol 25.48 17.7
GSMUA_Achr6P34980_001 Banana cytosol 31.85 17.67
CDX91976 Canola mitochondrion 31.21 17.19
GSMUA_Achr5P01470_001 Banana nucleus 31.21 17.07
Solyc02g066900.1.1 Tomato cytosol 34.39 17.03
Bra033105.1-P Field mustard nucleus 23.57 16.97
CDX74273 Canola mitochondrion 28.03 16.12
Bra001031.1-P Field mustard mitochondrion 28.03 16.12
Solyc02g032670.1.1 Tomato cytosol 26.75 16.03
GSMUA_Achr9P09330_001 Banana nucleus 34.39 15.98
Bra039157.1-P Field mustard cytosol 28.03 15.88
TraesCS4B01G246800.1 Wheat nucleus 24.2 15.7
CDY68672 Canola cytosol, mitochondrion, nucleus, plastid 27.39 15.58
TraesCS4A01G058100.1 Wheat nucleus 24.2 15.45
Solyc02g030620.1.1 Tomato cytosol 28.03 14.86
TraesCS4D01G246100.2 Wheat nucleus 23.57 14.74
CDY43256 Canola mitochondrion 25.48 14.29
Solyc02g066890.1.1 Tomato cytosol 32.48 14.21
AT3G02140.1 Thale cress cytosol 28.66 14.11
Solyc04g005380.2.1 Tomato nucleus 33.76 13.8
KRH01286 Soybean nucleus 33.12 13.79
Os03t0214200-01 Rice nucleus 34.39 13.47
Solyc02g066840.1.1 Tomato cytosol 12.74 13.33
KRH45047 Soybean nucleus 32.48 13.32
VIT_14s0068g00300.t01 Wine grape nucleus 31.85 12.92
EER92642 Sorghum nucleus 31.85 12.69
EER89528 Sorghum nucleus 28.66 12.61
Zm00001d048085_P002 Maize nucleus 30.57 12.21
Solyc02g032720.1.1 Tomato cytosol 27.39 11.62
HORVU4Hr1G067930.1 Barley nucleus 29.3 11.39
Solyc05g012210.2.1 Tomato extracellular, golgi 31.85 10.8
TraesCS4B01G247000.1 Wheat nucleus 26.75 10.61
TraesCS4D01G246400.1 Wheat nucleus 26.75 10.61
Solyc02g030600.1.1 Tomato cytosol 12.1 9.09
TraesCS4A01G057800.1 Wheat cytosol, mitochondrion, nucleus, plastid 27.39 8.41
Protein Annotations
EnsemblPlants:Solyc02g066870.1.1EnsemblPlantsGene:Solyc02g066870.1GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009987
InterPro:JasInterPro:Ninja_famPANTHER:PTHR31413PANTHER:PTHR31413:SF10PFAM:PF16135UniParc:UPI0002768FE8
UniProt:K4B719MapMan:15.5.53.3::::
Description
No Description!
Coordinates
chr2:+:37078801..37081880
Molecular Weight (calculated)
17217.6 Da
IEP (calculated)
5.067
GRAVY (calculated)
-0.376
Length
157 amino acids
Sequence
(BLAST)
001: MEKAKEKIGT SRNVEYKNMK LNLGLPLNGE SQRCVASSVA EVEIQQSPTQ GESQGCVASS VAEVEIQQLP TQEENIAKEK FENFMLNNMA NVYTKCEGPK
101: GKKIEGLLYS CAEIDEVKIV CLCHGNFLNA GEFVKHAGGG DVVNPLEHIF IEGKQIK
Best Arabidopsis Sequence Match ( AT3G29575.1 )
(BLAST)
001: MSKKQRLSEE DGEVEIELDL GLSLNGRFGV DPLAKTRLMR STSVLDLVVN DRSGLSRTCS LPVETEEEWR KRKELQSLRR LEAKRKRSEK QRKHKACGGE
101: EKVVEEGSIG SSGSGSSGLS EVDTLLPPVQ ATTNKSVETS PSSAQSQPEN LGKEASQNII EDMPFVSTTG DGPNGKKING FLYRYRKGEE VRIVCVCHGS
201: FLSPAEFVKH AGGGDVAHPL KHIVVNPSPF L
Arabidopsis Description
AFP3Ninja-family protein AFP3 [Source:UniProtKB/Swiss-Prot;Acc:Q94F39]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.