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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 5
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, secretory
BaCelLo:secretory
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Solyc01g058740.2.1
Solyc02g030600.1.1
Solyc02g030610.1.1
Solyc02g030620.1.1
Solyc02g030630.1.1
Solyc02g030650.1.1
Solyc02g032670.1.1
Solyc02g032680.1.1
Solyc02g032690.1.1
Solyc02g032710.1.1
Solyc02g032720.1.1
Solyc02g066840.1.1
Solyc02g066850.1.1
Solyc02g066860.1.1
Solyc02g066870.1.1
Solyc02g066890.1.1
Solyc02g066900.1.1
Solyc02g088910.2.1
Solyc04g005380.2.1
Solyc05g012210.2.1
Solyc09g009490.2.1
Solyc10g076920.1.1
Solyc10g081350.1.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G02140.1 Solyc04g005380.2.1 AT1G13740.1 18484180
AT3G02140.1 Solyc05g012210.2.1 AT1G13740.1 18484180
AT3G02140.1 Solyc04g005380.2.1 AT1G69260.1 18484180
AT3G02140.1 Solyc05g012210.2.1 AT1G69260.1 18484180
AT3G02140.1 Solyc01g058740.2.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g030600.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g030610.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g030620.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g030630.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g030650.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g032670.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g032680.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g032690.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g032710.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g032720.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g066840.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g066850.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g066860.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g066870.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g066890.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g066900.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g088910.2.1 AT3G02140.1 18484180
AT3G02140.1 Solyc09g009490.2.1 AT3G44460.1 18484180
AT3G02140.1 Solyc10g076920.1.1 AT3G56850.1 18484180
AT3G02140.1 Solyc10g081350.1.1 AT3G56850.1 18484180
AT3G29575.1 Solyc04g005380.2.1 AT1G13740.1 18484180
AT3G29575.1 Solyc05g012210.2.1 AT1G13740.1 18484180
AT3G29575.1 Solyc04g005380.2.1 AT1G69260.1 18484180
AT3G29575.1 Solyc05g012210.2.1 AT1G69260.1 18484180
AT3G29575.1 Solyc01g058740.2.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g030600.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g030610.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g030620.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g030630.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g030650.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g032670.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g032680.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g032690.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g032710.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g032720.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g066840.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g066850.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g066860.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g066870.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g066890.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g066900.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g088910.2.1 AT3G29575.1 18484180
AT3G29575.1 Solyc09g009490.2.1 AT3G44460.1 18484180
AT3G29575.1 Solyc10g076920.1.1 AT3G56850.1 18484180
AT3G29575.1 Solyc10g081350.1.1 AT3G56850.1 18484180
AT3G29575.1 Solyc10g076920.1.1 AT3G56850.1 21798944
AT3G29575.1 Solyc10g081350.1.1 AT3G56850.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc06g083290.1.1 Tomato cytosol, extracellular, plastid 54.55 52.94
GSMUA_Achr4P32830_001 Banana nucleus 65.15 31.62
Solyc02g030650.1.1 Tomato nucleus 81.82 30.0
HORVU4Hr1G035770.1 Barley plastid 50.0 29.73
Solyc02g032680.1.1 Tomato cytosol 53.03 29.17
Solyc02g066860.1.1 Tomato cytosol 53.03 26.92
Solyc02g032710.1.1 Tomato cytosol 51.52 25.19
Solyc02g032140.1.1 Tomato cytosol 46.97 25.0
Solyc02g032690.1.1 Tomato cytosol 87.88 24.17
Solyc02g066870.1.1 Tomato cytosol 51.52 21.66
Solyc02g030610.1.1 Tomato cytosol 51.52 21.25
TraesCS3D01G532000.1 Wheat nucleus 54.55 21.18
Solyc01g058740.2.1 Tomato cytosol 21.21 19.72
Solyc02g032670.1.1 Tomato cytosol 77.27 19.47
AT3G29575.1 Thale cress nucleus 66.67 19.05
Solyc02g030630.1.1 Tomato cytosol 87.88 18.95
Solyc02g066900.1.1 Tomato cytosol 89.39 18.61
Solyc02g030620.1.1 Tomato cytosol 83.33 18.58
CDY04085 Canola nucleus 65.15 17.27
CDY44386 Canola nucleus 65.15 17.13
CDY00093 Canola nucleus 65.15 16.93
CDY19988 Canola nucleus 65.15 16.86
Bra036210.1-P Field mustard nucleus 65.15 16.86
CDX85274 Canola nucleus 65.15 16.23
Solyc02g066890.1.1 Tomato cytosol 87.88 16.16
CDX86364 Canola nucleus 65.15 16.1
Bra025400.1-P Field mustard nucleus 65.15 16.1
Solyc02g032720.1.1 Tomato cytosol 89.39 15.95
TraesCS3B01G594200.1 Wheat cytosol 53.03 15.49
GSMUA_Achr5P01470_001 Banana nucleus 66.67 15.33
TraesCS4B01G246800.1 Wheat nucleus 54.55 14.88
GSMUA_Achr6P34980_001 Banana cytosol 63.64 14.84
TraesCS4A01G058100.1 Wheat nucleus 54.55 14.63
TraesCS4D01G246100.2 Wheat nucleus 54.55 14.34
CDX74273 Canola mitochondrion 59.09 14.29
Solyc02g088910.2.1 Tomato nucleus 68.18 14.2
CDY68672 Canola cytosol, mitochondrion, nucleus, plastid 57.58 13.77
Bra039157.1-P Field mustard cytosol 57.58 13.72
Bra001031.1-P Field mustard mitochondrion 56.06 13.55
CDX91976 Canola mitochondrion 57.58 13.33
GSMUA_Achr9P09330_001 Banana nucleus 68.18 13.31
KRH01286 Soybean nucleus 69.7 12.2
CDY43256 Canola mitochondrion 51.52 12.14
KRH45047 Soybean nucleus 68.18 11.75
PGSC0003DMT400036545 Potato nucleus 86.36 11.66
VIT_14s0068g00300.t01 Wine grape nucleus 68.18 11.63
AT3G02140.1 Thale cress cytosol 56.06 11.6
Os03t0214200-01 Rice nucleus 66.67 10.97
Bra033105.1-P Field mustard nucleus 34.85 10.55
EER92642 Sorghum nucleus 60.61 10.15
Zm00001d048085_P002 Maize nucleus 59.09 9.92
Solyc04g005380.2.1 Tomato nucleus 56.06 9.64
EER89528 Sorghum nucleus 50.0 9.24
TraesCS4D01G246400.1 Wheat nucleus 54.55 9.09
TraesCS4B01G247000.1 Wheat nucleus 53.03 8.84
HORVU4Hr1G067930.1 Barley nucleus 53.03 8.66
Solyc05g012210.2.1 Tomato extracellular, golgi 59.09 8.42
TraesCS4A01G057800.1 Wheat cytosol, mitochondrion, nucleus, plastid 54.55 7.05
Solyc02g066840.1.1 Tomato cytosol 4.55 2.0
Solyc02g030600.1.1 Tomato cytosol 4.55 1.44
Protein Annotations
EnsemblPlants:Solyc02g066850.1.1EnsemblPlantsGene:Solyc02g066850.1GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009987
InterPro:JasInterPro:Ninja_famPANTHER:PTHR31413PANTHER:PTHR31413:SF10PFAM:PF16135UniParc:UPI0002768DFE
UniProt:K4B717MapMan:15.5.53.3::::
Description
No Description!
Coordinates
chr2:+:37061594..37061794
Molecular Weight (calculated)
6985.4 Da
IEP (calculated)
8.241
GRAVY (calculated)
-0.170
Length
66 amino acids
Sequence
(BLAST)
1: MPGVSTLGDG PNGKNTEGFL YAYKRGGEVK IVCICHGHFL TPAQFFKHAG GGDVENPLRL ITVGPN
Best Arabidopsis Sequence Match ( AT3G29575.1 )
(BLAST)
001: MSKKQRLSEE DGEVEIELDL GLSLNGRFGV DPLAKTRLMR STSVLDLVVN DRSGLSRTCS LPVETEEEWR KRKELQSLRR LEAKRKRSEK QRKHKACGGE
101: EKVVEEGSIG SSGSGSSGLS EVDTLLPPVQ ATTNKSVETS PSSAQSQPEN LGKEASQNII EDMPFVSTTG DGPNGKKING FLYRYRKGEE VRIVCVCHGS
201: FLSPAEFVKH AGGGDVAHPL KHIVVNPSPF L
Arabidopsis Description
AFP3Ninja-family protein AFP3 [Source:UniProtKB/Swiss-Prot;Acc:Q94F39]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.