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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Solyc01g058740.2.1
Solyc02g030600.1.1
Solyc02g030610.1.1
Solyc02g030620.1.1
Solyc02g030630.1.1
Solyc02g030650.1.1
Solyc02g032670.1.1
Solyc02g032680.1.1
Solyc02g032690.1.1
Solyc02g032710.1.1
Solyc02g032720.1.1
Solyc02g066840.1.1
Solyc02g066850.1.1
Solyc02g066860.1.1
Solyc02g066870.1.1
Solyc02g066890.1.1
Solyc02g066900.1.1
Solyc02g088910.2.1
Solyc04g005380.2.1
Solyc05g012210.2.1
Solyc09g009490.2.1
Solyc10g076920.1.1
Solyc10g081350.1.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G02140.1 Solyc04g005380.2.1 AT1G13740.1 18484180
AT3G02140.1 Solyc05g012210.2.1 AT1G13740.1 18484180
AT3G02140.1 Solyc04g005380.2.1 AT1G69260.1 18484180
AT3G02140.1 Solyc05g012210.2.1 AT1G69260.1 18484180
AT3G02140.1 Solyc01g058740.2.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g030600.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g030610.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g030620.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g030630.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g030650.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g032670.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g032680.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g032690.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g032710.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g032720.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g066840.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g066850.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g066860.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g066870.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g066890.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g066900.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g088910.2.1 AT3G02140.1 18484180
AT3G02140.1 Solyc09g009490.2.1 AT3G44460.1 18484180
AT3G02140.1 Solyc10g076920.1.1 AT3G56850.1 18484180
AT3G02140.1 Solyc10g081350.1.1 AT3G56850.1 18484180
AT3G29575.1 Solyc04g005380.2.1 AT1G13740.1 18484180
AT3G29575.1 Solyc05g012210.2.1 AT1G13740.1 18484180
AT3G29575.1 Solyc04g005380.2.1 AT1G69260.1 18484180
AT3G29575.1 Solyc05g012210.2.1 AT1G69260.1 18484180
AT3G29575.1 Solyc01g058740.2.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g030600.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g030610.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g030620.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g030630.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g030650.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g032670.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g032680.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g032690.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g032710.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g032720.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g066840.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g066850.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g066860.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g066870.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g066890.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g066900.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g088910.2.1 AT3G29575.1 18484180
AT3G29575.1 Solyc09g009490.2.1 AT3G44460.1 18484180
AT3G29575.1 Solyc10g076920.1.1 AT3G56850.1 18484180
AT3G29575.1 Solyc10g081350.1.1 AT3G56850.1 18484180
AT3G29575.1 Solyc10g076920.1.1 AT3G56850.1 21798944
AT3G29575.1 Solyc10g081350.1.1 AT3G56850.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc02g032680.1.1 Tomato cytosol 79.23 85.83
PGSC0003DMT400036544 Potato cytosol 78.46 80.31
Solyc02g066850.1.1 Tomato cytosol 26.92 53.03
Solyc02g030610.1.1 Tomato cytosol 60.0 48.75
Solyc01g058740.2.1 Tomato cytosol 26.15 47.89
Solyc06g083290.1.1 Tomato cytosol, extracellular, plastid 21.54 41.18
Solyc02g032710.1.1 Tomato cytosol 35.38 34.07
Solyc02g066870.1.1 Tomato cytosol 36.92 30.57
Solyc02g032140.1.1 Tomato cytosol 26.15 27.42
GSMUA_Achr4P32830_001 Banana nucleus 27.69 26.47
HORVU4Hr1G035770.1 Barley plastid 21.54 25.23
Solyc02g030650.1.1 Tomato nucleus 32.31 23.33
Solyc02g032690.1.1 Tomato cytosol 36.15 19.58
AT3G29575.1 Thale cress nucleus 33.08 18.61
CDY04085 Canola nucleus 33.85 17.67
TraesCS3D01G532000.1 Wheat nucleus 23.08 17.65
CDY44386 Canola nucleus 33.08 17.13
CDY00093 Canola nucleus 33.08 16.93
CDY19988 Canola nucleus 33.08 16.86
Bra036210.1-P Field mustard nucleus 33.08 16.86
CDX74273 Canola mitochondrion 35.38 16.85
Bra001031.1-P Field mustard mitochondrion 34.62 16.48
Solyc02g032670.1.1 Tomato cytosol 33.08 16.41
CDY68672 Canola cytosol, mitochondrion, nucleus, plastid 34.62 16.3
Bra039157.1-P Field mustard cytosol 34.62 16.25
TraesCS3B01G594200.1 Wheat cytosol 27.69 15.93
CDX85274 Canola nucleus 32.31 15.85
CDX91976 Canola mitochondrion 34.62 15.79
CDX86364 Canola nucleus 32.31 15.73
Bra025400.1-P Field mustard nucleus 32.31 15.73
CDY43256 Canola mitochondrion 33.85 15.71
Solyc02g066900.1.1 Tomato cytosol 36.92 15.14
Solyc02g030630.1.1 Tomato cytosol 34.62 14.71
GSMUA_Achr5P01470_001 Banana nucleus 32.31 14.63
Solyc02g030620.1.1 Tomato cytosol 33.08 14.53
Solyc02g088910.2.1 Tomato nucleus 35.38 14.51
TraesCS4B01G246800.1 Wheat nucleus 26.92 14.46
TraesCS4A01G058100.1 Wheat nucleus 26.92 14.23
GSMUA_Achr6P34980_001 Banana cytosol 30.77 14.13
TraesCS4D01G246100.2 Wheat nucleus 26.92 13.94
AT3G02140.1 Thale cress cytosol 33.08 13.48
KRH01286 Soybean nucleus 36.92 12.73
GSMUA_Achr9P09330_001 Banana nucleus 32.31 12.43
KRH45047 Soybean nucleus 35.38 12.01
Solyc02g066890.1.1 Tomato cytosol 33.08 11.98
Solyc04g005380.2.1 Tomato nucleus 34.62 11.72
VIT_14s0068g00300.t01 Wine grape nucleus 34.62 11.63
Solyc02g032720.1.1 Tomato cytosol 33.08 11.62
Bra033105.1-P Field mustard nucleus 19.23 11.47
Os03t0214200-01 Rice nucleus 33.85 10.97
EER89528 Sorghum nucleus 30.0 10.92
EER92642 Sorghum nucleus 30.77 10.15
TraesCS4D01G246400.1 Wheat nucleus 29.23 9.6
Solyc05g012210.2.1 Tomato extracellular, golgi 33.85 9.5
Zm00001d048085_P002 Maize nucleus 27.69 9.16
TraesCS4B01G247000.1 Wheat nucleus 27.69 9.09
HORVU4Hr1G067930.1 Barley nucleus 27.69 8.91
TraesCS4A01G057800.1 Wheat cytosol, mitochondrion, nucleus, plastid 28.46 7.24
Solyc02g066840.1.1 Tomato cytosol 7.69 6.67
Solyc02g030600.1.1 Tomato cytosol 6.15 3.83
Protein Annotations
EnsemblPlants:Solyc02g066860.1.1EnsemblPlantsGene:Solyc02g066860.1GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009987
InterPro:JasInterPro:Ninja_famPANTHER:PTHR31413PANTHER:PTHR31413:SF10PFAM:PF16135UniParc:UPI0002768DFF
UniProt:K4B718MapMan:15.5.53.3::::
Description
No Description!
Coordinates
chr2:+:37073147..37073750
Molecular Weight (calculated)
14718.5 Da
IEP (calculated)
6.253
GRAVY (calculated)
-0.532
Length
130 amino acids
Sequence
(BLAST)
001: MEKIEENREN MRNVDLNVSC LLNGESSGSQ RSVASRLTDL ETQQPPNQWE SALEVKEKLR YFLHNMPCVV YDSPNGKKTK GYLLYSSVRR EDLKIVCSCH
101: ANFLTPAEFV KHGGGGDIEN PLKYIDIVLA
Best Arabidopsis Sequence Match ( AT1G13740.1 )
(BLAST)
001: MGEASRQQRA WNREMTVTTN LSLDIDKYPR DLLRGFMSEN GGGRVFHGGE TNCDDESTIE LNLGLSLGGR FGVDKTPRKL KRSSSVLDTV PFNDSTVAEP
101: ENYTVGLERT TSLPAEMEEE WRKRKEMQSL RRMEAKRRRC EKQSFRVGNS DDQTVSFENE RWVTASKSGF LQRHLVSSNR QVCGVDSDGG GATGGGSSSS
201: LSELDNKNQQ GSSNSCNDER SPKIVAGCSS NSGSQGTERP SVTRANKVNE NENEKRVRSE DSVDRKGKGM ATSTGLVDMP CVFTKGDGPN GRRVDGILYK
301: YGKGEEVRIM CICHGSFLTP AEFVKHGGGG DVDRPLRHIV VNTSSSTF
Arabidopsis Description
AFP2AFP2 [Source:UniProtKB/TrEMBL;Acc:A0A178WBB1]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.