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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Solyc01g058740.2.1
Solyc02g030600.1.1
Solyc02g030610.1.1
Solyc02g030620.1.1
Solyc02g030630.1.1
Solyc02g030650.1.1
Solyc02g032670.1.1
Solyc02g032680.1.1
Solyc02g032690.1.1
Solyc02g032710.1.1
Solyc02g032720.1.1
Solyc02g066840.1.1
Solyc02g066850.1.1
Solyc02g066860.1.1
Solyc02g066870.1.1
Solyc02g066890.1.1
Solyc02g066900.1.1
Solyc02g088910.2.1
Solyc04g005380.2.1
Solyc05g012210.2.1
Solyc09g009490.2.1
Solyc10g076920.1.1
Solyc10g081350.1.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G02140.1 Solyc04g005380.2.1 AT1G13740.1 18484180
AT3G02140.1 Solyc05g012210.2.1 AT1G13740.1 18484180
AT3G02140.1 Solyc04g005380.2.1 AT1G69260.1 18484180
AT3G02140.1 Solyc05g012210.2.1 AT1G69260.1 18484180
AT3G02140.1 Solyc01g058740.2.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g030600.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g030610.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g030620.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g030630.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g030650.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g032670.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g032680.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g032690.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g032710.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g032720.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g066840.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g066850.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g066860.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g066870.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g066890.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g066900.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g088910.2.1 AT3G02140.1 18484180
AT3G02140.1 Solyc09g009490.2.1 AT3G44460.1 18484180
AT3G02140.1 Solyc10g076920.1.1 AT3G56850.1 18484180
AT3G02140.1 Solyc10g081350.1.1 AT3G56850.1 18484180
AT3G29575.1 Solyc04g005380.2.1 AT1G13740.1 18484180
AT3G29575.1 Solyc05g012210.2.1 AT1G13740.1 18484180
AT3G29575.1 Solyc04g005380.2.1 AT1G69260.1 18484180
AT3G29575.1 Solyc05g012210.2.1 AT1G69260.1 18484180
AT3G29575.1 Solyc01g058740.2.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g030600.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g030610.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g030620.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g030630.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g030650.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g032670.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g032680.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g032690.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g032710.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g032720.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g066840.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g066850.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g066860.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g066870.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g066890.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g066900.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g088910.2.1 AT3G29575.1 18484180
AT3G29575.1 Solyc09g009490.2.1 AT3G44460.1 18484180
AT3G29575.1 Solyc10g076920.1.1 AT3G56850.1 18484180
AT3G29575.1 Solyc10g081350.1.1 AT3G56850.1 18484180
AT3G29575.1 Solyc10g076920.1.1 AT3G56850.1 21798944
AT3G29575.1 Solyc10g081350.1.1 AT3G56850.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc02g066850.1.1 Tomato cytosol 19.47 77.27
Solyc02g030620.1.1 Tomato cytosol 60.69 53.72
Solyc02g032690.1.1 Tomato cytosol 47.71 52.08
Solyc06g083290.1.1 Tomato cytosol, extracellular, plastid 11.45 44.12
Solyc02g030630.1.1 Tomato cytosol 46.95 40.2
Solyc02g030650.1.1 Tomato nucleus 25.95 37.78
GSMUA_Achr4P32830_001 Banana nucleus 19.08 36.76
Solyc02g032680.1.1 Tomato cytosol 15.65 34.17
Solyc02g066860.1.1 Tomato cytosol 16.41 33.08
Solyc02g032140.1.1 Tomato cytosol 15.65 33.06
Solyc02g066900.1.1 Tomato cytosol 38.17 31.55
Bra036210.1-P Field mustard nucleus 29.39 30.2
CDY19988 Canola nucleus 29.39 30.2
Solyc02g032710.1.1 Tomato cytosol 15.27 29.63
CDY00093 Canola nucleus 28.24 29.13
AT3G29575.1 Thale cress nucleus 25.57 29.0
HORVU4Hr1G035770.1 Barley plastid 12.21 28.83
Solyc01g058740.2.1 Tomato cytosol 7.63 28.17
Solyc02g030610.1.1 Tomato cytosol 17.18 28.12
CDX85274 Canola nucleus 27.86 27.55
CDX86364 Canola nucleus 27.48 26.97
Bra025400.1-P Field mustard nucleus 27.48 26.97
CDY04085 Canola nucleus 25.57 26.91
Solyc02g066870.1.1 Tomato cytosol 16.03 26.75
Solyc02g066890.1.1 Tomato cytosol 36.26 26.46
CDY44386 Canola nucleus 25.19 26.29
Solyc02g032720.1.1 Tomato cytosol 37.02 26.22
TraesCS3D01G532000.1 Wheat nucleus 16.79 25.88
Solyc02g088910.2.1 Tomato nucleus 28.63 23.66
Bra001031.1-P Field mustard mitochondrion 23.66 22.71
CDX74273 Canola mitochondrion 23.66 22.71
CDX91976 Canola mitochondrion 24.43 22.46
KRH01286 Soybean nucleus 31.68 22.02
TraesCS3B01G594200.1 Wheat cytosol 18.7 21.68
Bra039157.1-P Field mustard cytosol 22.9 21.66
GSMUA_Achr9P09330_001 Banana nucleus 27.86 21.6
Bra033105.1-P Field mustard nucleus 17.94 21.56
TraesCS4B01G246800.1 Wheat nucleus 19.85 21.49
GSMUA_Achr5P01470_001 Banana nucleus 23.28 21.25
CDY68672 Canola cytosol, mitochondrion, nucleus, plastid 22.14 21.01
KRH45047 Soybean nucleus 30.53 20.89
TraesCS4D01G246100.2 Wheat nucleus 19.85 20.72
GSMUA_Achr6P34980_001 Banana cytosol 22.14 20.49
VIT_14s0068g00300.t01 Wine grape nucleus 28.63 19.38
CDY43256 Canola mitochondrion 20.61 19.29
TraesCS4A01G058100.1 Wheat nucleus 17.94 19.11
Solyc04g005380.2.1 Tomato nucleus 26.72 18.23
Os03t0214200-01 Rice nucleus 27.86 18.2
AT3G02140.1 Thale cress cytosol 22.14 18.18
EER89528 Sorghum nucleus 22.52 16.53
Zm00001d048085_P002 Maize nucleus 23.66 15.78
EER92642 Sorghum nucleus 23.66 15.74
Solyc05g012210.2.1 Tomato extracellular, golgi 27.48 15.55
TraesCS4B01G247000.1 Wheat nucleus 22.9 15.15
TraesCS4D01G246400.1 Wheat nucleus 22.52 14.9
Solyc02g066840.1.1 Tomato cytosol 8.4 14.67
HORVU4Hr1G067930.1 Barley nucleus 22.52 14.6
Solyc02g030600.1.1 Tomato cytosol 9.92 12.44
TraesCS4A01G057800.1 Wheat cytosol, mitochondrion, nucleus, plastid 23.66 12.13
Protein Annotations
EnsemblPlants:Solyc02g032670.1.1EnsemblPlantsGene:Solyc02g032670.1GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009987
InterPro:JasInterPro:Ninja_famPANTHER:PTHR31413PANTHER:PTHR31413:SF10PFAM:PF16135SEG:seg
UniParc:UPI000276755BUniProt:K4B5L1MapMan:15.5.53.3:::
Description
No Description!
Coordinates
chr2:-:28959189..28960123
Molecular Weight (calculated)
28919.2 Da
IEP (calculated)
5.076
GRAVY (calculated)
-0.610
Length
262 amino acids
Sequence
(BLAST)
001: MDTEIESRKR LEAEMDWRRR MVTEIECSLR METEMEWRQM SGPFSVTRAA SMPPMETQTE WVKMSDPFSV NRTASLPPME TGMDWKERRD LQTQTCGDTQ
101: QNRWDKLKNV IVFEENEGNG TSSLPSPGGS GSVGSFGSAG TIDRTFIEGA SGSSNAIPPV SGPLEKMQHL VLAAIEATNE QSPDFSGKEG IRNFLLKMPG
201: VATKGDGPNG KKTEGFLYAY KRGGEVKIVC ICHGYFLTPA EFVKHASGGD VENPLNAYNC RS
Best Arabidopsis Sequence Match ( AT3G29575.1 )
(BLAST)
001: MSKKQRLSEE DGEVEIELDL GLSLNGRFGV DPLAKTRLMR STSVLDLVVN DRSGLSRTCS LPVETEEEWR KRKELQSLRR LEAKRKRSEK QRKHKACGGE
101: EKVVEEGSIG SSGSGSSGLS EVDTLLPPVQ ATTNKSVETS PSSAQSQPEN LGKEASQNII EDMPFVSTTG DGPNGKKING FLYRYRKGEE VRIVCVCHGS
201: FLSPAEFVKH AGGGDVAHPL KHIVVNPSPF L
Arabidopsis Description
AFP3Ninja-family protein AFP3 [Source:UniProtKB/Swiss-Prot;Acc:Q94F39]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.