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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol, nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Solyc01g058740.2.1
Solyc02g030600.1.1
Solyc02g030610.1.1
Solyc02g030620.1.1
Solyc02g030630.1.1
Solyc02g030650.1.1
Solyc02g032670.1.1
Solyc02g032680.1.1
Solyc02g032690.1.1
Solyc02g032710.1.1
Solyc02g032720.1.1
Solyc02g066840.1.1
Solyc02g066850.1.1
Solyc02g066860.1.1
Solyc02g066870.1.1
Solyc02g066890.1.1
Solyc02g066900.1.1
Solyc02g088910.2.1
Solyc04g005380.2.1
Solyc05g012210.2.1
Solyc09g009490.2.1
Solyc10g076920.1.1
Solyc10g081350.1.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G02140.1 Solyc04g005380.2.1 AT1G13740.1 18484180
AT3G02140.1 Solyc05g012210.2.1 AT1G13740.1 18484180
AT3G02140.1 Solyc04g005380.2.1 AT1G69260.1 18484180
AT3G02140.1 Solyc05g012210.2.1 AT1G69260.1 18484180
AT3G02140.1 Solyc01g058740.2.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g030600.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g030610.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g030620.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g030630.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g030650.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g032670.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g032680.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g032690.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g032710.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g032720.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g066840.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g066850.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g066860.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g066870.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g066890.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g066900.1.1 AT3G02140.1 18484180
AT3G02140.1 Solyc02g088910.2.1 AT3G02140.1 18484180
AT3G02140.1 Solyc09g009490.2.1 AT3G44460.1 18484180
AT3G02140.1 Solyc10g076920.1.1 AT3G56850.1 18484180
AT3G02140.1 Solyc10g081350.1.1 AT3G56850.1 18484180
AT3G29575.1 Solyc04g005380.2.1 AT1G13740.1 18484180
AT3G29575.1 Solyc05g012210.2.1 AT1G13740.1 18484180
AT3G29575.1 Solyc04g005380.2.1 AT1G69260.1 18484180
AT3G29575.1 Solyc05g012210.2.1 AT1G69260.1 18484180
AT3G29575.1 Solyc01g058740.2.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g030600.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g030610.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g030620.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g030630.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g030650.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g032670.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g032680.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g032690.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g032710.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g032720.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g066840.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g066850.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g066860.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g066870.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g066890.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g066900.1.1 AT3G29575.1 18484180
AT3G29575.1 Solyc02g088910.2.1 AT3G29575.1 18484180
AT3G29575.1 Solyc09g009490.2.1 AT3G44460.1 18484180
AT3G29575.1 Solyc10g076920.1.1 AT3G56850.1 18484180
AT3G29575.1 Solyc10g081350.1.1 AT3G56850.1 18484180
AT3G29575.1 Solyc10g076920.1.1 AT3G56850.1 21798944
AT3G29575.1 Solyc10g081350.1.1 AT3G56850.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc02g066870.1.1 Tomato cytosol 91.11 78.34
PGSC0003DMT400089614 Potato cytosol 74.07 73.53
Solyc02g066850.1.1 Tomato cytosol 25.19 51.52
Solyc06g083290.1.1 Tomato cytosol, extracellular, plastid 21.48 42.65
Solyc02g032680.1.1 Tomato cytosol 32.59 36.67
Solyc02g066860.1.1 Tomato cytosol 34.07 35.38
Solyc02g030610.1.1 Tomato cytosol 34.81 29.38
GSMUA_Achr4P32830_001 Banana nucleus 26.67 26.47
HORVU4Hr1G035770.1 Barley plastid 21.48 26.13
Solyc02g030650.1.1 Tomato nucleus 32.59 24.44
Solyc02g032140.1.1 Tomato cytosol 22.22 24.19
TraesCS3D01G532000.1 Wheat nucleus 28.15 22.35
AT3G29575.1 Thale cress nucleus 37.78 22.08
Solyc01g058740.2.1 Tomato cytosol 11.11 21.13
CDY44386 Canola nucleus 37.78 20.32
CDY04085 Canola nucleus 36.3 19.68
CDY00093 Canola nucleus 36.3 19.29
CDY19988 Canola nucleus 36.3 19.22
Bra036210.1-P Field mustard nucleus 36.3 19.22
CDX85274 Canola nucleus 35.56 18.11
CDX86364 Canola nucleus 35.56 17.98
Bra025400.1-P Field mustard nucleus 35.56 17.98
TraesCS3B01G594200.1 Wheat cytosol 29.63 17.7
Solyc02g032690.1.1 Tomato cytosol 31.11 17.5
Solyc02g030630.1.1 Tomato cytosol 39.26 17.32
GSMUA_Achr6P34980_001 Banana cytosol 35.56 16.96
Solyc02g066900.1.1 Tomato cytosol 38.52 16.4
CDX91976 Canola mitochondrion 34.07 16.14
Solyc02g088910.2.1 Tomato nucleus 37.04 15.77
TraesCS4B01G246800.1 Wheat nucleus 28.15 15.7
GSMUA_Achr5P01470_001 Banana nucleus 33.33 15.68
Bra033105.1-P Field mustard nucleus 25.19 15.6
TraesCS4A01G058100.1 Wheat nucleus 28.15 15.45
Solyc02g032670.1.1 Tomato cytosol 29.63 15.27
CDX74273 Canola mitochondrion 30.37 15.02
Bra001031.1-P Field mustard mitochondrion 30.37 15.02
CDY68672 Canola cytosol, mitochondrion, nucleus, plastid 30.37 14.86
Bra039157.1-P Field mustard cytosol 30.37 14.8
GSMUA_Achr9P09330_001 Banana nucleus 37.04 14.79
TraesCS4D01G246100.2 Wheat nucleus 27.41 14.74
CDY43256 Canola mitochondrion 28.89 13.93
AT3G02140.1 Thale cress cytosol 32.59 13.79
Solyc02g066890.1.1 Tomato cytosol 34.81 13.09
Solyc02g030620.1.1 Tomato cytosol 28.15 12.84
KRH01286 Soybean nucleus 35.56 12.73
Solyc04g005380.2.1 Tomato nucleus 35.56 12.5
KRH45047 Soybean nucleus 34.81 12.27
Solyc02g066840.1.1 Tomato cytosol 13.33 12.0
VIT_14s0068g00300.t01 Wine grape nucleus 34.07 11.89
Os03t0214200-01 Rice nucleus 34.81 11.72
EER89528 Sorghum nucleus 30.37 11.48
EER92642 Sorghum nucleus 31.85 10.91
Solyc02g032720.1.1 Tomato cytosol 29.63 10.81
Zm00001d048085_P002 Maize nucleus 30.37 10.43
HORVU4Hr1G067930.1 Barley nucleus 31.11 10.4
TraesCS4B01G247000.1 Wheat nucleus 29.63 10.1
TraesCS4D01G246400.1 Wheat nucleus 29.63 10.1
Solyc05g012210.2.1 Tomato extracellular, golgi 32.59 9.5
Solyc02g030600.1.1 Tomato cytosol 12.59 8.13
TraesCS4A01G057800.1 Wheat cytosol, mitochondrion, nucleus, plastid 30.37 8.02
Protein Annotations
EnsemblPlants:Solyc02g032710.1.1EnsemblPlantsGene:Solyc02g032710.1GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009987
InterPro:JasInterPro:Ninja_famPANTHER:PTHR31413PANTHER:PTHR31413:SF10PFAM:PF16135SEG:seg
UniParc:UPI000276755FUniProt:K4B5L5MapMan:15.5.53.3:::
Description
No Description!
Coordinates
chr2:-:28992158..28992785
Molecular Weight (calculated)
14886.9 Da
IEP (calculated)
5.300
GRAVY (calculated)
-0.357
Length
135 amino acids
Sequence
(BLAST)
001: MEKAKEKIGT SRIVENKNMK LNLGLSLDGE SQGCVASSVA EVEILQSPTQ EENIAKEKFE NFVLNNMANV YTKGEGPKGK KIEGLLYSCK EIDEVKIVCL
101: CHGNFLNADE FVKHAGGGDI VNPFEHIFIE GKQIK
Best Arabidopsis Sequence Match ( AT3G29575.1 )
(BLAST)
001: MSKKQRLSEE DGEVEIELDL GLSLNGRFGV DPLAKTRLMR STSVLDLVVN DRSGLSRTCS LPVETEEEWR KRKELQSLRR LEAKRKRSEK QRKHKACGGE
101: EKVVEEGSIG SSGSGSSGLS EVDTLLPPVQ ATTNKSVETS PSSAQSQPEN LGKEASQNII EDMPFVSTTG DGPNGKKING FLYRYRKGEE VRIVCVCHGS
201: FLSPAEFVKH AGGGDVAHPL KHIVVNPSPF L
Arabidopsis Description
AFP3Ninja-family protein AFP3 [Source:UniProtKB/Swiss-Prot;Acc:Q94F39]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.