Factsheet for Solyc02g032680.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g058740.2.1
Solyc02g030600.1.1
Solyc02g030610.1.1
Solyc02g030620.1.1
Solyc02g030630.1.1
Solyc02g030650.1.1
Solyc02g032670.1.1
Solyc02g032680.1.1
Solyc02g032690.1.1
Solyc02g032710.1.1
Solyc02g032720.1.1
Solyc02g066840.1.1
Solyc02g066850.1.1
Solyc02g066860.1.1
Solyc02g066870.1.1
Solyc02g066890.1.1
Solyc02g066900.1.1
Solyc02g088910.2.1
Solyc04g005380.2.1
Solyc05g012210.2.1
Solyc09g009490.2.1
Solyc10g076920.1.1
Solyc10g081350.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G02140.1	Solyc04g005380.2.1	AT1G13740.1	18484180
AT3G02140.1	Solyc05g012210.2.1	AT1G13740.1	18484180
AT3G02140.1	Solyc04g005380.2.1	AT1G69260.1	18484180
AT3G02140.1	Solyc05g012210.2.1	AT1G69260.1	18484180
AT3G02140.1	Solyc01g058740.2.1	AT3G02140.1	18484180
AT3G02140.1	Solyc02g030600.1.1	AT3G02140.1	18484180
AT3G02140.1	Solyc02g030610.1.1	AT3G02140.1	18484180
AT3G02140.1	Solyc02g030620.1.1	AT3G02140.1	18484180
AT3G02140.1	Solyc02g030630.1.1	AT3G02140.1	18484180
AT3G02140.1	Solyc02g030650.1.1	AT3G02140.1	18484180
AT3G02140.1	Solyc02g032670.1.1	AT3G02140.1	18484180
AT3G02140.1	Solyc02g032680.1.1	AT3G02140.1	18484180
AT3G02140.1	Solyc02g032690.1.1	AT3G02140.1	18484180
AT3G02140.1	Solyc02g032710.1.1	AT3G02140.1	18484180
AT3G02140.1	Solyc02g032720.1.1	AT3G02140.1	18484180
AT3G02140.1	Solyc02g066840.1.1	AT3G02140.1	18484180
AT3G02140.1	Solyc02g066850.1.1	AT3G02140.1	18484180
AT3G02140.1	Solyc02g066860.1.1	AT3G02140.1	18484180
AT3G02140.1	Solyc02g066870.1.1	AT3G02140.1	18484180
AT3G02140.1	Solyc02g066890.1.1	AT3G02140.1	18484180
AT3G02140.1	Solyc02g066900.1.1	AT3G02140.1	18484180
AT3G02140.1	Solyc02g088910.2.1	AT3G02140.1	18484180
AT3G02140.1	Solyc09g009490.2.1	AT3G44460.1	18484180
AT3G02140.1	Solyc10g076920.1.1	AT3G56850.1	18484180
AT3G02140.1	Solyc10g081350.1.1	AT3G56850.1	18484180
AT3G29575.1	Solyc04g005380.2.1	AT1G13740.1	18484180
AT3G29575.1	Solyc05g012210.2.1	AT1G13740.1	18484180
AT3G29575.1	Solyc04g005380.2.1	AT1G69260.1	18484180
AT3G29575.1	Solyc05g012210.2.1	AT1G69260.1	18484180
AT3G29575.1	Solyc01g058740.2.1	AT3G29575.1	18484180
AT3G29575.1	Solyc02g030600.1.1	AT3G29575.1	18484180
AT3G29575.1	Solyc02g030610.1.1	AT3G29575.1	18484180
AT3G29575.1	Solyc02g030620.1.1	AT3G29575.1	18484180
AT3G29575.1	Solyc02g030630.1.1	AT3G29575.1	18484180
AT3G29575.1	Solyc02g030650.1.1	AT3G29575.1	18484180
AT3G29575.1	Solyc02g032670.1.1	AT3G29575.1	18484180
AT3G29575.1	Solyc02g032680.1.1	AT3G29575.1	18484180
AT3G29575.1	Solyc02g032690.1.1	AT3G29575.1	18484180
AT3G29575.1	Solyc02g032710.1.1	AT3G29575.1	18484180
AT3G29575.1	Solyc02g032720.1.1	AT3G29575.1	18484180
AT3G29575.1	Solyc02g066840.1.1	AT3G29575.1	18484180
AT3G29575.1	Solyc02g066850.1.1	AT3G29575.1	18484180
AT3G29575.1	Solyc02g066860.1.1	AT3G29575.1	18484180
AT3G29575.1	Solyc02g066870.1.1	AT3G29575.1	18484180
AT3G29575.1	Solyc02g066890.1.1	AT3G29575.1	18484180
AT3G29575.1	Solyc02g066900.1.1	AT3G29575.1	18484180
AT3G29575.1	Solyc02g088910.2.1	AT3G29575.1	18484180
AT3G29575.1	Solyc09g009490.2.1	AT3G44460.1	18484180
AT3G29575.1	Solyc10g076920.1.1	AT3G56850.1	18484180
AT3G29575.1	Solyc10g081350.1.1	AT3G56850.1	18484180
AT3G29575.1	Solyc10g076920.1.1	AT3G56850.1	21798944
AT3G29575.1	Solyc10g081350.1.1	AT3G56850.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g066860.1.1	Tomato	cytosol	85.83	79.23
PGSC0003DMT400036544	Potato	cytosol	75.83	71.65
Solyc02g066850.1.1	Tomato	cytosol	29.17	53.03
Solyc02g030610.1.1	Tomato	cytosol	60.83	45.62
Solyc01g058740.2.1	Tomato	cytosol	26.67	45.07
Solyc06g083290.1.1	Tomato	cytosol, extracellular, plastid	23.33	41.18
Solyc02g032710.1.1	Tomato	cytosol	36.67	32.59
Solyc02g066870.1.1	Tomato	cytosol	37.5	28.66
HORVU4Hr1G035770.1	Barley	plastid	25.83	27.93
GSMUA_Achr4P32830_001	Banana	nucleus	29.17	25.74
Solyc02g032140.1.1	Tomato	cytosol	25.83	25.0
Solyc02g030650.1.1	Tomato	nucleus	35.83	23.89
Solyc02g032690.1.1	Tomato	cytosol	39.17	19.58
AT3G29575.1	Thale cress	nucleus	37.5	19.48
CDY04085	Canola	nucleus	38.33	18.47
TraesCS3D01G532000.1	Wheat	nucleus	25.83	18.24
CDY00093	Canola	nucleus	38.33	18.11
CDY19988	Canola	nucleus	38.33	18.04
Bra036210.1-P	Field mustard	nucleus	38.33	18.04
CDY44386	Canola	nucleus	37.5	17.93
Solyc02g066900.1.1	Tomato	cytosol	44.17	16.72
CDX85274	Canola	nucleus	36.67	16.6
Bra025400.1-P	Field mustard	nucleus	36.67	16.48
CDX86364	Canola	nucleus	36.67	16.48
CDX74273	Canola	mitochondrion	36.67	16.12
Bra001031.1-P	Field mustard	mitochondrion	35.83	15.75
Solyc02g032670.1.1	Tomato	cytosol	34.17	15.65
CDY68672	Canola	cytosol, mitochondrion, nucleus, plastid	35.0	15.22
Bra039157.1-P	Field mustard	cytosol	35.0	15.16
CDX91976	Canola	mitochondrion	35.83	15.09
TraesCS3B01G594200.1	Wheat	cytosol	28.33	15.04
GSMUA_Achr5P01470_001	Banana	nucleus	35.83	14.98
Solyc02g030630.1.1	Tomato	cytosol	37.5	14.71
CDY43256	Canola	mitochondrion	34.17	14.64
GSMUA_Achr6P34980_001	Banana	cytosol	34.17	14.49
TraesCS4B01G246800.1	Wheat	nucleus	29.17	14.46
Solyc02g030620.1.1	Tomato	cytosol	35.0	14.19
TraesCS4A01G058100.1	Wheat	nucleus	28.33	13.82
Solyc02g088910.2.1	Tomato	nucleus	35.83	13.56
TraesCS4D01G246100.2	Wheat	nucleus	28.33	13.55
AT3G02140.1	Thale cress	cytosol	33.33	12.54
Solyc02g066890.1.1	Tomato	cytosol	37.5	12.53
Solyc04g005380.2.1	Tomato	nucleus	40.0	12.5
KRH01286	Soybean	nucleus	39.17	12.47
GSMUA_Achr9P09330_001	Banana	nucleus	35.0	12.43
KRH45047	Soybean	nucleus	38.33	12.01
Bra033105.1-P	Field mustard	nucleus	21.67	11.93
EER89528	Sorghum	nucleus	35.0	11.76
Solyc02g032720.1.1	Tomato	cytosol	35.0	11.35
VIT_14s0068g00300.t01	Wine grape	nucleus	35.83	11.11
Os03t0214200-01	Rice	nucleus	36.67	10.97
EER92642	Sorghum	nucleus	34.17	10.41
Solyc05g012210.2.1	Tomato	extracellular, golgi	37.5	9.72
Zm00001d048085_P002	Maize	nucleus	30.83	9.41
TraesCS4D01G246400.1	Wheat	nucleus	29.17	8.84
TraesCS4B01G247000.1	Wheat	nucleus	27.5	8.33
HORVU4Hr1G067930.1	Barley	nucleus	27.5	8.17
Solyc02g066840.1.1	Tomato	cytosol	10.0	8.0
TraesCS4A01G057800.1	Wheat	cytosol, mitochondrion, nucleus, plastid	28.33	6.65
Solyc02g030600.1.1	Tomato	cytosol	9.17	5.26

Protein Annotations

EnsemblPlants:Solyc02g032680.1.1	EnsemblPlantsGene:Solyc02g032680.1	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987
InterPro:Jas	InterPro:Ninja_fam	PANTHER:PTHR31413	PANTHER:PTHR31413:SF10	PFAM:PF16135	UniParc:UPI000276755C
UniProt:K4B5L2	MapMan:15.5.53.3	:	:	:	:

Description

No Description!

Coordinates

chr2:-:28977098..28977687

Molecular Weight (calculated)

13395.0 Da

IEP (calculated)

8.318

GRAVY (calculated)

-0.389

Length

120 amino acids

Sequence
(BLAST)

001: MRNVDLNVAC LLNGESSGSQ RSVASSLTDL ETKQPPNQWE SAQEFKKKLR YFLHNMPCVV YDSPNGKKTK GYLLYSSVRR EDLKIVCSCH ASFLTPAEFV
101: KHGGGGDIEN PLKYIDIVLA

Best Arabidopsis Sequence Match ( AT1G13740.1 )
(BLAST)

001: MGEASRQQRA WNREMTVTTN LSLDIDKYPR DLLRGFMSEN GGGRVFHGGE TNCDDESTIE LNLGLSLGGR FGVDKTPRKL KRSSSVLDTV PFNDSTVAEP
101: ENYTVGLERT TSLPAEMEEE WRKRKEMQSL RRMEAKRRRC EKQSFRVGNS DDQTVSFENE RWVTASKSGF LQRHLVSSNR QVCGVDSDGG GATGGGSSSS
201: LSELDNKNQQ GSSNSCNDER SPKIVAGCSS NSGSQGTERP SVTRANKVNE NENEKRVRSE DSVDRKGKGM ATSTGLVDMP CVFTKGDGPN GRRVDGILYK
301: YGKGEEVRIM CICHGSFLTP AEFVKHGGGG DVDRPLRHIV VNTSSSTF

Arabidopsis Description

AFP2AFP2 [Source:UniProtKB/TrEMBL;Acc:A0A178WBB1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.