Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- peroxisome 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040367.1-P | Field mustard | nucleus | 90.32 | 90.32 |
| Solyc06g083290.1.1 | Tomato | cytosol, extracellular, plastid | 14.7 | 60.29 |
| CDY08008 | Canola | cytosol | 54.84 | 53.31 |
| CDX74054 | Canola | nucleus | 50.9 | 49.31 |
| AT3G07255.1 | Thale cress | nucleus | 51.25 | 48.81 |
| GSMUA_Achr4P32830_001 | Banana | nucleus | 15.77 | 32.35 |
| HORVU4Hr1G035770.1 | Barley | plastid | 11.11 | 27.93 |
| CDX86364 | Canola | nucleus | 24.73 | 25.84 |
| CDY19988 | Canola | nucleus | 23.3 | 25.49 |
| CDX85274 | Canola | nucleus | 24.01 | 25.28 |
| CDY00093 | Canola | nucleus | 22.94 | 25.2 |
| CDY44386 | Canola | nucleus | 22.22 | 24.7 |
| CDY04085 | Canola | nucleus | 21.86 | 24.5 |
| PGSC0003DMT400051959 | Potato | nucleus | 21.15 | 22.96 |
| TraesCS3D01G532000.1 | Wheat | nucleus | 13.98 | 22.94 |
| KRH07456 | Soybean | nucleus | 27.96 | 22.29 |
| CDY33807 | Canola | nucleus | 24.37 | 22.01 |
| KRH66123 | Soybean | nucleus | 27.6 | 21.75 |
| CDY16104 | Canola | nucleus | 24.01 | 21.68 |
| CDX98125 | Canola | nucleus | 24.37 | 21.32 |
| GSMUA_Achr5P01470_001 | Banana | nucleus | 21.86 | 21.25 |
| GSMUA_Achr6P34980_001 | Banana | cytosol | 21.15 | 20.85 |
| TraesCS4A01G058100.1 | Wheat | nucleus | 18.28 | 20.73 |
| VIT_00s0216g00060.t01 | Wine grape | nucleus | 26.52 | 20.67 |
| CDY68672 | Canola | cytosol, mitochondrion, nucleus, plastid | 20.43 | 20.65 |
| CDY36406 | Canola | nucleus | 21.51 | 20.55 |
| GSMUA_Achr9P09330_001 | Banana | nucleus | 24.73 | 20.41 |
| TraesCS4B01G246800.1 | Wheat | nucleus | 17.56 | 20.25 |
| CDX74273 | Canola | mitochondrion | 19.71 | 20.15 |
| CDY43256 | Canola | mitochondrion | 20.07 | 20.0 |
| CDY04272 | Canola | nucleus | 24.73 | 19.94 |
| CDX95951 | Canola | nucleus | 24.01 | 19.94 |
| CDY07354 | Canola | nucleus | 24.73 | 19.88 |
| TraesCS3B01G594200.1 | Wheat | cytosol | 15.41 | 19.03 |
| CDX91976 | Canola | mitochondrion | 19.35 | 18.95 |
| CDY40905 | Canola | nucleus | 23.3 | 18.62 |
| TraesCS4D01G246100.2 | Wheat | nucleus | 16.13 | 17.93 |
| EER89528 | Sorghum | nucleus | 20.43 | 15.97 |
| Zm00001d048085_P002 | Maize | nucleus | 21.86 | 15.52 |
| EER92642 | Sorghum | nucleus | 21.51 | 15.23 |
| TraesCS4D01G246400.1 | Wheat | nucleus | 21.51 | 15.15 |
| Os03t0214200-01 | Rice | nucleus | 21.51 | 14.96 |
| TraesCS4B01G247000.1 | Wheat | nucleus | 20.79 | 14.65 |
| TraesCS4A01G057800.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 21.51 | 11.74 |
| HORVU4Hr1G067930.1 | Barley | nucleus | 16.49 | 11.39 |
Protein Annotations
| EnsemblPlants:CDY34910 | EnsemblPlantsGene:GSBRNA2T00057482001 | GO:A0A078H8V2 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0009987 | InterPro:Jas | InterPro:Ninja_fam | PANTHER:PTHR31413 | PANTHER:PTHR31413:SF11 | PFAM:PF16135 |
| ProteinID:CDY34910 | ProteinID:CDY34910.1 | SEG:seg | UniParc:UPI0004EED191 | UniProt:A0A078H8V2 | MapMan:15.5.53.3 |
Description
BnaA01g32410DBnaA01g32410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H8V2]
Coordinates
chrLK032343:+:55437..56845
Molecular Weight (calculated)
30315.4 Da
IEP (calculated)
6.850
GRAVY (calculated)
-0.713
Length
279 amino acids
Sequence
(BLAST)
(BLAST)
001: MATKLGKDED AAVELELCLS LGGPFKKAQP LEFCTERKPN NAVRCVEDID VDLNDGAVRH ENNETRTKET RKEREGKQQQ RSGGEGEYKR IRTECKEVTN
101: GVDQFDLSFS GLGNGYRWGQ YKENSKAATI GSPICSSSDV SDPSGSCELG INSDQTKPVK SPVNNITTHT NEGQEDAVVV ETQEWSSSVA KETGKPPKPR
201: PKGNGSMLPF AQMPCVTSTG NGPQGKTVNG FLHRYTKSEI SIICVCHGTS FSPAEFIIHA GGTNVSHPLR HITVVPSKF
101: GVDQFDLSFS GLGNGYRWGQ YKENSKAATI GSPICSSSDV SDPSGSCELG INSDQTKPVK SPVNNITTHT NEGQEDAVVV ETQEWSSSVA KETGKPPKPR
201: PKGNGSMLPF AQMPCVTSTG NGPQGKTVNG FLHRYTKSEI SIICVCHGTS FSPAEFIIHA GGTNVSHPLR HITVVPSKF
001: MFVESLSMAE KFVEDENVEV ELELELCLSL GGPFKKTEKS KTFGQSNAVG FEKDNGVNLD GRTTNVTRIK ETRKKREAKQ QQRSGEEGEC KRIRTEYNGV
101: SNGDDMDLSS INMCNGYGSG RLKESSKDVT IGSPICTSSS VSDPSSSSRQ EGGSGDIGAQ SGQTKQVRSP VNNILTGTEQ TVHNTDGSKD AETQEWSNSS
201: VTKESGKPPK PHTNSNGNGS LLPFAQMPCV TSTGNGPEGK TVNGFLYRYS KSEISIICVC HGTSFSPAEF IVHAGGTNVS HPLRHITVVP STL
101: SNGDDMDLSS INMCNGYGSG RLKESSKDVT IGSPICTSSS VSDPSSSSRQ EGGSGDIGAQ SGQTKQVRSP VNNILTGTEQ TVHNTDGSKD AETQEWSNSS
201: VTKESGKPPK PHTNSNGNGS LLPFAQMPCV TSTGNGPEGK TVNGFLYRYS KSEISIICVC HGTSFSPAEF IVHAGGTNVS HPLRHITVVP STL
Arabidopsis Description
Nuclear transport factor 2/RNA recognition motif protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNF2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.