Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH03141 | Soybean | nucleus | 42.91 | 51.49 |
| KRH63223 | Soybean | nucleus | 31.91 | 34.62 |
| KRH54707 | Soybean | nucleus | 30.14 | 34.14 |
| Solyc02g032140.1.1 | Tomato | cytosol | 14.89 | 33.87 |
| GSMUA_Achr4P32830_001 | Banana | nucleus | 15.96 | 33.09 |
| HORVU4Hr1G035770.1 | Barley | plastid | 11.7 | 29.73 |
| TraesCS3D01G532000.1 | Wheat | nucleus | 14.18 | 23.53 |
| TraesCS4B01G246800.1 | Wheat | nucleus | 18.44 | 21.49 |
| TraesCS4A01G058100.1 | Wheat | nucleus | 18.44 | 21.14 |
| TraesCS4D01G246100.2 | Wheat | nucleus | 18.44 | 20.72 |
| TraesCS3B01G594200.1 | Wheat | cytosol | 16.31 | 20.35 |
| GSMUA_Achr9P09330_001 | Banana | nucleus | 23.76 | 19.82 |
| GSMUA_Achr6P34980_001 | Banana | cytosol | 19.5 | 19.43 |
| GSMUA_Achr5P01470_001 | Banana | nucleus | 19.5 | 19.16 |
| KRH01286 | Soybean | nucleus | 22.34 | 16.71 |
| KRH75067 | Soybean | nucleus | 24.11 | 16.71 |
| KRH70923 | Soybean | nucleus | 24.11 | 16.55 |
| KRH45047 | Soybean | nucleus | 21.99 | 16.19 |
| TraesCS4B01G247000.1 | Wheat | nucleus | 22.34 | 15.91 |
| TraesCS4D01G246400.1 | Wheat | nucleus | 21.99 | 15.66 |
| HORVU4Hr1G067930.1 | Barley | nucleus | 22.34 | 15.59 |
| KRH66123 | Soybean | nucleus | 19.5 | 15.54 |
| Os03t0214200-01 | Rice | nucleus | 21.63 | 15.21 |
| PGSC0003DMT400091590 | Potato | cytosol | 20.92 | 14.46 |
| EER89528 | Sorghum | nucleus | 18.09 | 14.29 |
| KRH07456 | Soybean | nucleus | 17.73 | 14.29 |
| Zm00001d048085_P002 | Maize | nucleus | 19.86 | 14.25 |
| EER92642 | Sorghum | nucleus | 19.5 | 13.96 |
| VIT_17s0000g05280.t01 | Wine grape | nucleus | 19.86 | 13.11 |
| TraesCS4A01G057800.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 21.99 | 12.13 |
Protein Annotations
| EMBL:ACUP02002797 | EnsemblPlants:KRH56804 | EnsemblPlantsGene:GLYMA_05G020400 | EntrezGene:100776397 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009987 | InterPro:Jas | InterPro:Ninja_fam | PANTHER:PTHR31413 | PANTHER:PTHR31413:SF10 |
| PFAM:PF16135 | ProteinID:KRH56804 | ProteinID:KRH56804.1 | SEG:seg | UniParc:UPI0001BA88D8 | UniProt:K7KME4 |
| MapMan:15.5.53.3 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr5:+:1821664..1825334
Molecular Weight (calculated)
30994.3 Da
IEP (calculated)
8.472
GRAVY (calculated)
-0.491
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSPFSWISM EEGFYSEKPY TNSEQIDLTL KLSPCGQNAE EKKMVLARSS SSMVVEEAKN TMGTNAEEEK MVIVRFGDLQ TMRRVRTGKR LLMKKKLMAA
101: AAEAKKSLPV SPAGGPQPLP HSIDNNFKTF ANPCRDAWHE GAGSNFQTPP KKENDSMLSS VAIQEMTPWP SDTMIERPAK KPKHVNSYQE SEATDIVRQM
201: PCVITTGGGT TGKRTEGLLY KYKRGQVCIV CVCHGSFLSP TEFVMHAGGK EVADPMKHIT VCSDLVYING DGAGLSPGPW KP
101: AAEAKKSLPV SPAGGPQPLP HSIDNNFKTF ANPCRDAWHE GAGSNFQTPP KKENDSMLSS VAIQEMTPWP SDTMIERPAK KPKHVNSYQE SEATDIVRQM
201: PCVITTGGGT TGKRTEGLLY KYKRGQVCIV CVCHGSFLSP TEFVMHAGGK EVADPMKHIT VCSDLVYING DGAGLSPGPW KP
001: MSKKQRLSEE DGEVEIELDL GLSLNGRFGV DPLAKTRLMR STSVLDLVVN DRSGLSRTCS LPVETEEEWR KRKELQSLRR LEAKRKRSEK QRKHKACGGE
101: EKVVEEGSIG SSGSGSSGLS EVDTLLPPVQ ATTNKSVETS PSSAQSQPEN LGKEASQNII EDMPFVSTTG DGPNGKKING FLYRYRKGEE VRIVCVCHGS
201: FLSPAEFVKH AGGGDVAHPL KHIVVNPSPF L
101: EKVVEEGSIG SSGSGSSGLS EVDTLLPPVQ ATTNKSVETS PSSAQSQPEN LGKEASQNII EDMPFVSTTG DGPNGKKING FLYRYRKGEE VRIVCVCHGS
201: FLSPAEFVKH AGGGDVAHPL KHIVVNPSPF L
Arabidopsis Description
AFP3Ninja-family protein AFP3 [Source:UniProtKB/Swiss-Prot;Acc:Q94F39]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.