Factsheet for GSMUA_Achr9P07070_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
nucleus 2
mitochondrion 7
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P32830_001	Banana	nucleus	19.48	61.03
GSMUA_Achr6P27430_001	Banana	nucleus	45.31	54.37
GSMUA_Achr3P15940_001	Banana	nucleus	38.97	47.56
GSMUA_Achr4P14370_001	Banana	nucleus	35.45	45.07
GSMUA_Achr9P09330_001	Banana	nucleus	33.57	42.31
GSMUA_Achr3P30390_001	Banana	nucleus	31.92	41.09
HORVU4Hr1G035770.1	Barley	plastid	10.56	40.54
GSMUA_Achr5P01470_001	Banana	nucleus	26.76	39.72
GSMUA_Achr7P26660_001	Banana	nucleus	32.39	39.09
GSMUA_Achr6P34980_001	Banana	cytosol	24.65	37.1
TraesCS3D01G532000.1	Wheat	nucleus	12.91	32.35
Os03t0214200-01	Rice	nucleus	28.87	30.67
TraesCS3B01G594200.1	Wheat	cytosol	15.96	30.09
EER92642	Sorghum	nucleus	27.0	29.19
EER89528	Sorghum	nucleus	23.24	27.73
Zm00001d048085_P002	Maize	nucleus	24.88	26.97
TraesCS4B01G246800.1	Wheat	nucleus	14.79	26.03
TraesCS4B01G247000.1	Wheat	nucleus	24.18	26.01
TraesCS4D01G246400.1	Wheat	nucleus	23.71	25.51
HORVU4Hr1G067930.1	Barley	nucleus	23.47	24.75
TraesCS4A01G058100.1	Wheat	nucleus	14.08	24.39
TraesCS4D01G246100.2	Wheat	nucleus	13.15	22.31
TraesCS4A01G057800.1	Wheat	cytosol, mitochondrion, nucleus, plastid	25.82	21.53

Protein Annotations

EnsemblPlants:GSMUA_Achr9P07070_001	EnsemblPlants:GSMUA_Achr9T07070_001	EnsemblPlantsGene:GSMUA_Achr9G07070_001	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0009987	InterPro:Jas	InterPro:NINJA_B	InterPro:Ninja_fam	InterPro:Ninja_motif	ncoils:Coil
PANTHER:PTHR31413	PANTHER:PTHR31413:SF6	PFAM:PF07897	PFAM:PF16135	PFAM:PF16136	SEG:seg
UniParc:UPI000295E685	UniProt:M0TY66	MapMan:15.5.53.3	:	:	:

Description

Putative Ninja-family protein Os03g0214200 [Source:GMGC_GENE;Acc:GSMUA_Achr9G07070_001]

Coordinates

chr9:+:4450194..4453406

Molecular Weight (calculated)

45853.8 Da

IEP (calculated)

8.337

GRAVY (calculated)

-0.190

Length

426 amino acids

Sequence
(BLAST)

001: MLPLHRLRAA CFASTRPRPS PPAALPLLPA GCVRSSVFDR SFSLPFLLGV LMEAEAAEGE LERPSSAIES FPRDLLHRLS GNNFSSEQAE ALGGESDEVE
101: LNLSLGLSLA GCFGVDPEGK KLVRSSSIAS FSSLPREHDF FTVTPTLVRA SSLPTESEEE RRKRKESQGL RRLEAKRKRL EKRSSIKSGA LKDEGGKSLA
201: AAMSVNGRLS VPIGTQFSGV FDVVIPPRPP AWAAGPNSTV AQGSVGSQGS SSFSVSEVES QTPARGTTSV LRFLVNPCCY LSFCSTFSFS LTQHLKILQI
301: DSNGKYHSLN ILQIRSILIS EVGINTHPFA GEEDPLKKVA DATTDASLGR NMMEDMPCVS TRGDGPNGRR IEGLLYRYKK GEDVRIVCVC HGSFLTPAEF
401: VKHAGGGDVA HPLRHIVVNP SPPALL

Best Arabidopsis Sequence Match ( AT3G29575.1 )
(BLAST)

001: MSKKQRLSEE DGEVEIELDL GLSLNGRFGV DPLAKTRLMR STSVLDLVVN DRSGLSRTCS LPVETEEEWR KRKELQSLRR LEAKRKRSEK QRKHKACGGE
101: EKVVEEGSIG SSGSGSSGLS EVDTLLPPVQ ATTNKSVETS PSSAQSQPEN LGKEASQNII EDMPFVSTTG DGPNGKKING FLYRYRKGEE VRIVCVCHGS
201: FLSPAEFVKH AGGGDVAHPL KHIVVNPSPF L

Arabidopsis Description

AFP3Ninja-family protein AFP3 [Source:UniProtKB/Swiss-Prot;Acc:Q94F39]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.