Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G183700.1 | Wheat | nucleus | 63.64 | 65.48 |
| TraesCS2A01G176300.1 | Wheat | nucleus | 64.26 | 65.08 |
| TraesCS2B01G202700.2 | Wheat | nucleus | 63.95 | 64.56 |
| EER99676 | Sorghum | nucleus | 59.56 | 55.56 |
| HORVU2Hr1G032690.1 | Barley | cytosol | 41.07 | 55.51 |
| Os03t0419100-01 | Rice | nucleus | 52.35 | 54.4 |
| Zm00001d022069_P001 | Maize | nucleus | 52.35 | 54.4 |
| Os03t0214200-01 | Rice | nucleus | 38.56 | 30.67 |
Protein Annotations
| MapMan:15.5.53.3 | EntrezGene:4343834 | EMBL:AK240661 | ProteinID:BAC84471.1 | ProteinID:BAD31712.1 | ProteinID:BAF22123.2 |
| ProteinID:BAT02533.1 | ncoils:Coil | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | InterPro:Jas | InterPro:NINJA_B |
| InterPro:Ninja_fam | InterPro:Ninja_motif | EnsemblPlantsGene:Os07g0602900 | EnsemblPlants:Os07t0602900-01 | PFAM:PF07897 | PFAM:PF16135 |
| PFAM:PF16136 | PANTHER:PTHR31413 | PANTHER:PTHR31413:SF9 | UniProt:Q6YVY6 | UniParc:UPI00001BF6D8 | RefSeq:XP_015644885.1 |
| SEG:seg | : | : | : | : | : |
Description
Protein of unknown function DUF1675 domain containing protein. (Os07t0602900-01);Similar to UPF0737 protein 1. (Os07t0602900-02)
Coordinates
chr7:-:24633587..24636319
Molecular Weight (calculated)
33398.6 Da
IEP (calculated)
9.601
GRAVY (calculated)
-0.527
Length
319 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASRDFLGG FGGEVGGAAV AGEKGGGESD EIELSLGLSL GGCFGADLAR EFKKPRLVRS SSIASICSLP GGGGGGAGGD DVATAAPAPA PLMRTSSLPT
101: ETEEERWRRR EMQSLKRLEA KRKRLERRNS MNSGRSAGAG GGGRDDGQDA MYPTGFQLRR SVVSQGSTSS CMPEQGVGVG AEAMDTSSSD NASCQNKPLP
201: PTASSGGGGG GRPPANGSMK EQPPLRTLRS LTMRTTSTGD LRKSMMEDMP MVSSRVDGPN GRKIDGFLYK YRKREEVRIV CVCHGNFLTP AEFVKHAGGG
301: DVTNPLRHIV VNPSRSVFL
101: ETEEERWRRR EMQSLKRLEA KRKRLERRNS MNSGRSAGAG GGGRDDGQDA MYPTGFQLRR SVVSQGSTSS CMPEQGVGVG AEAMDTSSSD NASCQNKPLP
201: PTASSGGGGG GRPPANGSMK EQPPLRTLRS LTMRTTSTGD LRKSMMEDMP MVSSRVDGPN GRKIDGFLYK YRKREEVRIV CVCHGNFLTP AEFVKHAGGG
301: DVTNPLRHIV VNPSRSVFL
001: MGEASRQQRA WNREMTVTTN LSLDIDKYPR DLLRGFMSEN GGGRVFHGGE TNCDDESTIE LNLGLSLGGR FGVDKTPRKL KRSSSVLDTV PFNDSTVAEP
101: ENYTVGLERT TSLPAEMEEE WRKRKEMQSL RRMEAKRRRC EKQSFRVGNS DDQTVSFENE RWVTASKSGF LQRHLVSSNR QVCGVDSDGG GATGGGSSSS
201: LSELDNKNQQ GSSNSCNDER SPKIVAGCSS NSGSQGTERP SVTRANKVNE NENEKRVRSE DSVDRKGKGM ATSTGLVDMP CVFTKGDGPN GRRVDGILYK
301: YGKGEEVRIM CICHGSFLTP AEFVKHGGGG DVDRPLRHIV VNTSSSTF
101: ENYTVGLERT TSLPAEMEEE WRKRKEMQSL RRMEAKRRRC EKQSFRVGNS DDQTVSFENE RWVTASKSGF LQRHLVSSNR QVCGVDSDGG GATGGGSSSS
201: LSELDNKNQQ GSSNSCNDER SPKIVAGCSS NSGSQGTERP SVTRANKVNE NENEKRVRSE DSVDRKGKGM ATSTGLVDMP CVFTKGDGPN GRRVDGILYK
301: YGKGEEVRIM CICHGSFLTP AEFVKHGGGG DVDRPLRHIV VNTSSSTF
Arabidopsis Description
AFP2AFP2 [Source:UniProtKB/TrEMBL;Acc:A0A178WBB1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.