Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G202700.2 | Wheat | nucleus | 97.74 | 95.89 |
| TraesCS2A01G176300.1 | Wheat | nucleus | 94.84 | 93.33 |
| HORVU2Hr1G032690.1 | Barley | cytosol | 54.84 | 72.03 |
| Os07t0602900-01 | Rice | nucleus | 65.48 | 63.64 |
| EER99676 | Sorghum | nucleus | 55.48 | 50.29 |
| Zm00001d022069_P001 | Maize | nucleus | 49.03 | 49.51 |
| TraesCS3D01G532000.1 | Wheat | nucleus | 17.42 | 31.76 |
| TraesCS4D01G246100.2 | Wheat | nucleus | 20.32 | 25.1 |
| TraesCS4D01G246400.1 | Wheat | nucleus | 31.29 | 24.49 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G183700.1 | EnsemblPlantsGene:TraesCS2D01G183700 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 |
| InterPro:Jas | InterPro:NINJA_B | InterPro:Ninja_fam | InterPro:Ninja_motif | ncoils:Coil | PANTHER:PTHR31413 |
| PANTHER:PTHR31413:SF9 | PFAM:PF07897 | PFAM:PF16135 | PFAM:PF16136 | SEG:seg | MapMan:15.5.53.3 |
Description
No Description!
Coordinates
chr2D:+:128963984..128965693
Molecular Weight (calculated)
33114.2 Da
IEP (calculated)
10.021
GRAVY (calculated)
-0.655
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MASRDFLGRF GGEKGASSDK AGGGAGEPDE VVELSLGLSL GGCFGANSGR DAKKPRLVRS SSLAAMCSLP GTSDDIAAAT PPPAPLMRTS SLPTETEEER
101: WRRREMQSLK RLQAKRKRLE RRTSMNSGKS GGSSSRDDAQ EPLYPSAFQL RRSVVDQGNA SSSMPEQGSG DGAEAKSTSS MEISSDNNNQ NKSLPPPAPS
201: TAGKLPNGIV KEQPPLRTLR SLTMRTTSTG DLRKSMMEDM PMVSSKVDGP NGKKIDGFLY KYRKGEEVRI VCVCHGNFLT PAEFVKHAGG GDVTNPLRHI
301: VVNPSPSVFL
101: WRRREMQSLK RLQAKRKRLE RRTSMNSGKS GGSSSRDDAQ EPLYPSAFQL RRSVVDQGNA SSSMPEQGSG DGAEAKSTSS MEISSDNNNQ NKSLPPPAPS
201: TAGKLPNGIV KEQPPLRTLR SLTMRTTSTG DLRKSMMEDM PMVSSKVDGP NGKKIDGFLY KYRKGEEVRI VCVCHGNFLT PAEFVKHAGG GDVTNPLRHI
301: VVNPSPSVFL
001: MGEASRQQRA WNREMTVTTN LSLDIDKYPR DLLRGFMSEN GGGRVFHGGE TNCDDESTIE LNLGLSLGGR FGVDKTPRKL KRSSSVLDTV PFNDSTVAEP
101: ENYTVGLERT TSLPAEMEEE WRKRKEMQSL RRMEAKRRRC EKQSFRVGNS DDQTVSFENE RWVTASKSGF LQRHLVSSNR QVCGVDSDGG GATGGGSSSS
201: LSELDNKNQQ GSSNSCNDER SPKIVAGCSS NSGSQGTERP SVTRANKVNE NENEKRVRSE DSVDRKGKGM ATSTGLVDMP CVFTKGDGPN GRRVDGILYK
301: YGKGEEVRIM CICHGSFLTP AEFVKHGGGG DVDRPLRHIV VNTSSSTF
101: ENYTVGLERT TSLPAEMEEE WRKRKEMQSL RRMEAKRRRC EKQSFRVGNS DDQTVSFENE RWVTASKSGF LQRHLVSSNR QVCGVDSDGG GATGGGSSSS
201: LSELDNKNQQ GSSNSCNDER SPKIVAGCSS NSGSQGTERP SVTRANKVNE NENEKRVRSE DSVDRKGKGM ATSTGLVDMP CVFTKGDGPN GRRVDGILYK
301: YGKGEEVRIM CICHGSFLTP AEFVKHGGGG DVDRPLRHIV VNTSSSTF
Arabidopsis Description
AFP2AFP2 [Source:UniProtKB/TrEMBL;Acc:A0A178WBB1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.