Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G183700.1 | Wheat | nucleus | 72.03 | 54.84 |
| TraesCS2B01G202700.2 | Wheat | nucleus | 71.61 | 53.48 |
| TraesCS2A01G176300.1 | Wheat | nucleus | 67.37 | 50.48 |
| Os07t0602900-01 | Rice | nucleus | 55.51 | 41.07 |
| Zm00001d022069_P001 | Maize | nucleus | 47.03 | 36.16 |
| HORVU4Hr1G035770.1 | Barley | plastid | 16.95 | 36.04 |
| EER99676 | Sorghum | nucleus | 46.19 | 31.87 |
| HORVU4Hr1G067930.1 | Barley | nucleus | 31.78 | 18.56 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G032690.1 | EnsemblPlantsGene:HORVU2Hr1G032690 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 |
| InterPro:Jas | InterPro:Ninja_fam | PANTHER:PTHR31413 | PANTHER:PTHR31413:SF9 | PFAM:PF16135 | SEG:seg |
| UniParc:UPI000B4842F1 | UniProt:A0A287HLX9 | MapMan:15.5.53.3 | : | : | : |
Description
No Description!
Coordinates
chrchr2H:+:127655338..127657390
Molecular Weight (calculated)
24931.3 Da
IEP (calculated)
9.132
GRAVY (calculated)
-0.680
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MASRDFLGRF GGEKGASSDK AGGGAGEPDE VVELSLGXKR LERRTSMNSG KSGGSSSRDD AQEPLYPSAF QLRRSVVDQG NTSSSMPDQG SGDGAEAKST
101: SSMEISSDNN NNASNQNKSL PPPAPSPAGK LPNGIVKEQP PLRTLRSLTM RTTSTGDLRK SMMEDMPMVS SKVDGPNGKK IDGFLYKYRK GEEVRIVCVC
201: HGNFLTPAEF VKHAGGGDVT NPLRHIVVNP SPSVFL
101: SSMEISSDNN NNASNQNKSL PPPAPSPAGK LPNGIVKEQP PLRTLRSLTM RTTSTGDLRK SMMEDMPMVS SKVDGPNGKK IDGFLYKYRK GEEVRIVCVC
201: HGNFLTPAEF VKHAGGGDVT NPLRHIVVNP SPSVFL
001: MSKKQRLSEE DGEVEIELDL GLSLNGRFGV DPLAKTRLMR STSVLDLVVN DRSGLSRTCS LPVETEEEWR KRKELQSLRR LEAKRKRSEK QRKHKACGGE
101: EKVVEEGSIG SSGSGSSGLS EVDTLLPPVQ ATTNKSVETS PSSAQSQPEN LGKEASQNII EDMPFVSTTG DGPNGKKING FLYRYRKGEE VRIVCVCHGS
201: FLSPAEFVKH AGGGDVAHPL KHIVVNPSPF L
101: EKVVEEGSIG SSGSGSSGLS EVDTLLPPVQ ATTNKSVETS PSSAQSQPEN LGKEASQNII EDMPFVSTTG DGPNGKKING FLYRYRKGEE VRIVCVCHGS
201: FLSPAEFVKH AGGGDVAHPL KHIVVNPSPF L
Arabidopsis Description
AFP3Ninja-family protein AFP3 [Source:UniProtKB/Swiss-Prot;Acc:Q94F39]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.