CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0069g01150.t01	Wine grape	nucleus	13.52	75.44
Zm00001d022550_P001	Maize	nucleus	66.35	74.04
HORVU2Hr1G017020.2	Barley	nucleus	21.07	59.82
TraesCS2D01G098700.1	Wheat	nucleus	50.63	59.19
TraesCS2A01G099400.1	Wheat	nucleus	50.0	58.03
TraesCS2B01G115700.1	Wheat	nucleus	49.06	56.93
Os07t0686100-01	Rice	nucleus	47.8	55.47
KXG39483	Sorghum	nucleus	37.74	49.18
GSMUA_Achr8P21560_001	Banana	nucleus	34.91	46.64
VIT_12s0034g00110.t01	Wine grape	nucleus	13.84	44.44
GSMUA_Achr10P...	Banana	mitochondrion, nucleus	27.36	43.07
VIT_13s0175g00120.t01	Wine grape	nucleus	43.4	42.46
GSMUA_Achr6P15970_001	Banana	nucleus	25.79	42.27
GSMUA_Achr10P...	Banana	nucleus	29.56	40.17
KRH44714	Soybean	nucleus	39.94	39.32
EES18419	Sorghum	nucleus	39.94	39.2
KRH13203	Soybean	nucleus	36.79	38.74
EES03785	Sorghum	nucleus	40.57	38.74
KRH62689	Soybean	nucleus	38.05	38.29
KRH56272	Soybean	nucleus	37.74	37.97
KXG26981	Sorghum	nucleus	15.72	30.3
OQU78764	Sorghum	nucleus	27.67	28.21
EES03943	Sorghum	nucleus	22.01	26.72
EES07580	Sorghum	nucleus	28.3	26.01
KXG19586	Sorghum	nucleus	28.3	25.86
Solyc01g009510.1.1	Tomato	nucleus	15.41	25.79
OQU80633	Sorghum	nucleus	30.5	25.39
EES18296	Sorghum	nucleus, plastid	21.07	25.09
EER96850	Sorghum	nucleus	28.62	24.86
KXG33733	Sorghum	nucleus	29.87	23.11

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	UniProt:A0A1W0W861	ncoils:Coil	GO:GO:0003674	GO:GO:0003700
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR004827	ProteinID:OQU90533.1	EnsemblPlants:OQU90534	ProteinID:OQU90534	ProteinID:OQU90534.1	PFAM:PF00170
ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF211	SMART:SM00338	EnsemblPlantsGene:SORBI_3002G425600
SUPFAM:SSF57959	UniParc:UPI0009DC9187	InterPro:bZIP	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:-:77204164..77207098

Molecular Weight (calculated)

34629.1 Da

IEP (calculated)

10.303

GRAVY (calculated)

-0.635

Length

318 amino acids

Sequence
(BLAST)

001: MGVQTMSSHS HGDDARRGLP LPLPRQGSVY GLTLTEVETQ LGEPLRTMNL DDLLRTVLPA APAPNAAKKT VDEVWRDIQS AGARGGGARQ PSMGEMTLED
101: FLSRAGVAVD TAPHWMHQYP PQQQYALQLG AAAPGPGPAL DAAYRDRPVG VFLSNSHSQV AGRKRGAAAA VPGDGVVERT VERRQKRMIK NRESAARSRA
201: RKQAYTNELE NKIARLEEEN ERLRKLKLDE TKKMEPNEEH VHSLDSSIHP QFHSKSLSPN VGTTGATTGA ARAAAIAATG EEAAAPPPPA NEFRQFLMRR
301: PWAGRPYMFI VKLSRASN

Best Arabidopsis Sequence Match ( AT2G41070.4 )
(BLAST)

001: MSSQLKATYM GSIRGNIEEP ISQSLTRQNS LYSLKLHEVQ THLGSSGKPL GSMNLDELLK TVLPPAEEGL VRQGSLTLPR DLSKKTVDEV WRDIQQDKNG
101: NGTSTTTTHK QPTLGEITLE DLLLRAGVVT ETVVPQENVV NIASNGQWVE YHHQPQQQQG FMTYPVCEMQ DMVMMGGLSD TPQAPGRKRV AGEIVEKTVE
201: RRQKRMIKNR ESAARSRARK QAYTHELEIK VSRLEEENEK LRRLKEVEKI LPSEPPPDPK WKLRRTNSAS L

Arabidopsis Description

EELBasic-leucine zipper (bZIP) transcription factor family protein [Source:TAIR;Acc:AT2G41070]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.